BLASTX nr result
ID: Rheum21_contig00013761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00013761
(1308 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini... 235 3e-59
ref|XP_002531919.1| RNA and export factor binding protein, putat... 223 1e-55
ref|XP_006430580.1| hypothetical protein CICLE_v10012354mg [Citr... 220 9e-55
ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like isofor... 220 1e-54
ref|XP_006482108.1| PREDICTED: THO complex subunit 4-like isofor... 219 2e-54
gb|EMJ16974.1| hypothetical protein PRUPE_ppa009623mg [Prunus pe... 217 1e-53
ref|XP_006384155.1| hypothetical protein POPTR_0004s08540g [Popu... 215 3e-53
ref|XP_004288352.1| PREDICTED: THO complex subunit 4-like [Fraga... 214 5e-53
gb|ESW35378.1| hypothetical protein PHAVU_001G230200g [Phaseolus... 209 3e-51
ref|XP_003537446.1| PREDICTED: THO complex subunit 4-like isofor... 207 1e-50
ref|XP_006364627.1| PREDICTED: THO complex subunit 4-like isofor... 206 2e-50
ref|XP_004250178.1| PREDICTED: uncharacterized protein LOC101256... 205 3e-50
ref|XP_006482106.1| PREDICTED: THO complex subunit 4-like isofor... 204 7e-50
ref|XP_006430579.1| hypothetical protein CICLE_v10012354mg [Citr... 204 7e-50
ref|XP_004503129.1| PREDICTED: THO complex subunit 4-like [Cicer... 203 1e-49
gb|EOY14344.1| RNA-binding family protein, putative isoform 1 [T... 200 9e-49
ref|XP_006602008.1| PREDICTED: THO complex subunit 4-like isofor... 196 2e-47
ref|XP_004236691.1| PREDICTED: THO complex subunit 4-A-like [Sol... 196 2e-47
ref|XP_006346755.1| PREDICTED: THO complex subunit 4-like [Solan... 195 4e-47
ref|XP_006826913.1| hypothetical protein AMTR_s00010p00163740 [A... 194 7e-47
>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
gi|296087136|emb|CBI33510.3| unnamed protein product
[Vitis vinifera]
Length = 269
Score = 235 bits (600), Expect = 3e-59
Identities = 144/306 (47%), Positives = 168/306 (54%)
Frame = +3
Query: 168 MDKTLDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGRFPQGPLRVNA 347
M +LDMSL+D+I P R GPLRVNA
Sbjct: 1 MATSLDMSLDDIIKRSNSERVRGRGRARRGRGPIGGSFNGGRMSGIPPRR---GPLRVNA 57
Query: 348 RPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLDNGVSNDDIRELF 527
RPS++ IAKS RRT IP QHDL E SL A GLPG+E TKL++SNLD GV+N+DIRELF
Sbjct: 58 RPSSYAIAKSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELF 116
Query: 528 SEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMKVEIVTPKSE 707
SEIG++KRYA+HY KNG+PSGSAEVVYTRRSDAFAA+KRYNNV LDG+PMK+EI+ S+
Sbjct: 117 SEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSD 176
Query: 708 LPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGGMLRNTXXXXXXX 887
+PVSAR+NV GGVNG NR +RGRGG+
Sbjct: 177 MPVSARVNVIGGVNGKRRRTVVMTPGVGHARGS-TAINRSSSRRGRGGLSNG-------- 227
Query: 888 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKSADELDKELDKYH 1067
+KQP EKSA ELDKELD YH
Sbjct: 228 ------------------------RGRGRAGSRGRGRGRGRKQPVEKSAVELDKELDNYH 263
Query: 1068 AEAMET 1085
AEAM T
Sbjct: 264 AEAMHT 269
>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223528429|gb|EEF30463.1| RNA and export factor binding
protein, putative [Ricinus communis]
Length = 268
Score = 223 bits (569), Expect = 1e-55
Identities = 130/254 (51%), Positives = 155/254 (61%)
Frame = +3
Query: 324 QGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLDNGVS 503
+GPL VNARPS F+IAK RR N+P QHDL+E S+ A G+ G+E TKL+VSNL+ GVS
Sbjct: 48 KGPLSVNARPSQFSIAKPNRRIRNLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVS 107
Query: 504 NDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMKV 683
N+DIRELF+EIG+LKRYA+HY KNG+ +GSAEVVYTRRS+AFAA+K+YNNV LDG+PMK+
Sbjct: 108 NEDIRELFAEIGDLKRYAVHYDKNGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKI 167
Query: 684 EIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGGMLRN 863
EIV E P+SAR+NV G+NG P NRG QR RGG LRN
Sbjct: 168 EIVGVTGEAPISARVNV-TGINGRRKRTVVMTPGPGRGRG-FAPSNRGAGQRSRGG-LRN 224
Query: 864 TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKSADEL 1043
KKQP EKSADEL
Sbjct: 225 ------------------------------LGRGRGRGRGRGGHGGRGKKQPLEKSADEL 254
Query: 1044 DKELDKYHAEAMET 1085
DKELD YHAEAM++
Sbjct: 255 DKELDTYHAEAMQS 268
>ref|XP_006430580.1| hypothetical protein CICLE_v10012354mg [Citrus clementina]
gi|557532637|gb|ESR43820.1| hypothetical protein
CICLE_v10012354mg [Citrus clementina]
Length = 293
Score = 220 bits (561), Expect = 9e-55
Identities = 132/257 (51%), Positives = 153/257 (59%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL NARPS++TIAKSFRRT N P QHDL E SL A G+ GIE TKL+VSNL
Sbjct: 49 GAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
GV+NDDIRELFSEIGELKRYAIH+ KNG+PSGSAEVVY RRSDAFAA+KRYNNV LDG+
Sbjct: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGG 851
PMK+E+V +E+P+ AR+NV GVNG NRG +GR G
Sbjct: 168 PMKIEVVGTNAEIPLQARVNV-TGVNGRRKRTVVMTSGSGN-AGGAAAINRGPGSQGRRG 225
Query: 852 MLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKS 1031
LR + KK P +KS
Sbjct: 226 GLRRS----------SQGRGRGQGQGRGRGRGGGGGGGGGGGRGRGRGRGQGKKNPVDKS 275
Query: 1032 ADELDKELDKYHAEAME 1082
AD+LDKELD YHAEAM+
Sbjct: 276 ADDLDKELDNYHAEAMQ 292
>ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
Length = 298
Score = 220 bits (560), Expect = 1e-54
Identities = 128/259 (49%), Positives = 150/259 (57%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL VN RPS++ IAKS RR P QHDL E SL A G+ G+E TKL+VSNLD
Sbjct: 64 GAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLD 123
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
+GV+N+DIRELFSE+GELKR+A+HY KNG PSGSAEVVYTRRSDAFAA+KRYNNV LDG+
Sbjct: 124 HGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGK 183
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGG 851
PMK+EIV SELP+SAR+NV GVNG PNRG + RGG
Sbjct: 184 PMKIEIVGSNSELPISARVNV-TGVNGRRKRTVVMTPRGGQAGGGPTMPNRGAGRGRRGG 242
Query: 852 MLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKS 1031
+ +K EKS
Sbjct: 243 PRSGS-----------------------GRGGGGGRGRGRGSRGGGGGRGRGRKDAVEKS 279
Query: 1032 ADELDKELDKYHAEAMETS 1088
A+ELDKEL+ YHAEAM S
Sbjct: 280 AEELDKELETYHAEAMNIS 298
>ref|XP_006482108.1| PREDICTED: THO complex subunit 4-like isoform X3 [Citrus sinensis]
Length = 290
Score = 219 bits (558), Expect = 2e-54
Identities = 131/257 (50%), Positives = 153/257 (59%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL NARPS++TIAKSFRRT N P QHDL E SL A G+ GIE TKL+VSNL
Sbjct: 49 GAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
GV+NDDIRELFSEIGELKRYAIH+ KNG+PSGSAEVVY RRSDAFAA+KRYNNV LDG+
Sbjct: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGG 851
PMK+E+V +E+P+ AR+NV GVNG N G Q RGG
Sbjct: 168 PMKIEVVGTNAEIPLQARVNV-TGVNGRRKRTVVMTSGSGN-AGGAAAINHGPGQGRRGG 225
Query: 852 MLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKS 1031
+ R++ KK P +KS
Sbjct: 226 LRRSS-------------QGRGRGQGQGRGRGRGGGGGGGRGRGRGRGRGQGKKNPVDKS 272
Query: 1032 ADELDKELDKYHAEAME 1082
AD+LDKELD YHAEAM+
Sbjct: 273 ADDLDKELDNYHAEAMQ 289
>gb|EMJ16974.1| hypothetical protein PRUPE_ppa009623mg [Prunus persica]
Length = 284
Score = 217 bits (552), Expect = 1e-53
Identities = 126/258 (48%), Positives = 152/258 (58%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL VN RPS++TIAKS RRT P Q DL E S+ A G+ GIE TKL+VSNLD
Sbjct: 56 GAVRRGPLPVNTRPSSYTIAKSTRRTKRFPWQPDLFEDSIRAAGISGIEIGTKLYVSNLD 115
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
GV+N+DIRELFSEIGELKRYA+H+ KNG+PSGSAEVVYTRRSDAFAA+KRYNNV LDG+
Sbjct: 116 YGVTNEDIRELFSEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGK 175
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGG 851
PMK+EIV + +P+SAR+NV G LP NRG + RGG
Sbjct: 176 PMKIEIVGANAGMPISARVNVTGVHGRKKRTVVMTPGPGRGGGYALPMVNRGSGRSSRGG 235
Query: 852 MLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKS 1031
+RN +K+P +KS
Sbjct: 236 -IRN----------------------------GRGQPRGSGSGRGRGRSGPGRKKPVDKS 266
Query: 1032 ADELDKELDKYHAEAMET 1085
DELDKELD YHA+AM++
Sbjct: 267 VDELDKELDSYHADAMQS 284
>ref|XP_006384155.1| hypothetical protein POPTR_0004s08540g [Populus trichocarpa]
gi|550340608|gb|ERP61952.1| hypothetical protein
POPTR_0004s08540g [Populus trichocarpa]
Length = 274
Score = 215 bits (548), Expect = 3e-53
Identities = 122/258 (47%), Positives = 155/258 (60%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL VNARP ++IAK RR ++P QHDL+E S+ A G+ G+E TKL+VSNLD
Sbjct: 45 GAVRRGPLSVNARPPKYSIAKPSRRIRSLPWQHDLLEDSIRAAGITGLEVGTKLYVSNLD 104
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
GV+N+DIRELF+EIG+LKR+A+HY KNG+ +GSAEV+YTRRSDAF+A+K+YNNV LDGR
Sbjct: 105 YGVTNEDIRELFAEIGDLKRFAVHYDKNGRSTGSAEVMYTRRSDAFSALKKYNNVLLDGR 164
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGG 851
PMK+EIV E+P+SAR+NV G NG + M+P P RGRGG
Sbjct: 165 PMKIEIVGANPEVPISARVNV-TGANGKK----------KRTVVMMPGPG-----RGRGG 208
Query: 852 MLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKS 1031
++ N KKQP EKS
Sbjct: 209 VVNN------------HGSGQSRRGGGGPRNGMRNGRGRGRAQGQGRGRGRGKKQPAEKS 256
Query: 1032 ADELDKELDKYHAEAMET 1085
D+LDKEL+ YHAEAM+T
Sbjct: 257 VDDLDKELESYHAEAMQT 274
>ref|XP_004288352.1| PREDICTED: THO complex subunit 4-like [Fragaria vesca subsp. vesca]
Length = 283
Score = 214 bits (546), Expect = 5e-53
Identities = 137/307 (44%), Positives = 158/307 (51%), Gaps = 1/307 (0%)
Frame = +3
Query: 168 MDKTLDMSLEDLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGRFPQGPLRVNA 347
M TLDMSL+D+I R P +NA
Sbjct: 1 MTTTLDMSLDDMIKSKRGGNRYRTRERGGGRGPRGGRGGRGSFIGGRMVRRGPPPAAINA 60
Query: 348 RPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLDNGVSNDDIRELF 527
RPSA TIAKSFRRT + P Q DL E SL A G+ GIE TKL+VSNL GV+N+DIRELF
Sbjct: 61 RPSAHTIAKSFRRTKHFPWQPDLFEESLRAAGISGIEIGTKLYVSNLHYGVTNEDIRELF 120
Query: 528 SEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMKVEIVTPKSE 707
SEIGELKRYA+H+ KNG+PSGSAEVVYTRRSDAFAA+KRYNNV LDG+PMK+EIV
Sbjct: 121 SEIGELKRYAVHFDKNGRPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGVNEG 180
Query: 708 LPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVF-QRGRGGMLRNTXXXXXX 884
+P+SAR+NV G LP NRG R G +RN
Sbjct: 181 MPISARVNVTGVQGRKKRTVVMTPRPAHAGGYALPAVNRGPGPSRSTHGGIRN------- 233
Query: 885 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKSADELDKELDKY 1064
KK+P +KS DELDKELD Y
Sbjct: 234 -----------------GRGISRGRGRGRGRGRGRGQGSEWKKKPVDKSVDELDKELDTY 276
Query: 1065 HAEAMET 1085
HAEAM+T
Sbjct: 277 HAEAMQT 283
>gb|ESW35378.1| hypothetical protein PHAVU_001G230200g [Phaseolus vulgaris]
Length = 302
Score = 209 bits (531), Expect = 3e-51
Identities = 104/147 (70%), Positives = 120/147 (81%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL VN RPS++ IAKS RRT P QHDL E SL A G+ G+E TKL+VSNLD
Sbjct: 65 GAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLD 124
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
+GV+N+DIRELFSE+GELKRYA+HY KNG PSGSAEVVYTRRSDAFAA+KRYNNV LDG+
Sbjct: 125 HGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGK 184
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNG 752
PMK+EIV ELP+SAR+NV GVNG
Sbjct: 185 PMKIEIVGSNGELPISARVNV-TGVNG 210
>ref|XP_003537446.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
Length = 298
Score = 207 bits (526), Expect = 1e-50
Identities = 103/147 (70%), Positives = 120/147 (81%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL VN RPS++ IAKS RR P QHDL E SL A G+ G+E TKL+VSNLD
Sbjct: 65 GAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLD 124
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
+GV+N+DIRELFSE+GELKR+A+HY KNG PSGSAEVVYTRRSDAFAA+KRYNNV LDG+
Sbjct: 125 HGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGK 184
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNG 752
PMK+EIV SELP+SAR+NV GVNG
Sbjct: 185 PMKIEIVGSNSELPISARVNV-TGVNG 210
>ref|XP_006364627.1| PREDICTED: THO complex subunit 4-like isoform X1 [Solanum tuberosum]
gi|565398120|ref|XP_006364628.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Solanum tuberosum]
Length = 282
Score = 206 bits (524), Expect = 2e-50
Identities = 126/263 (47%), Positives = 154/263 (58%), Gaps = 9/263 (3%)
Frame = +3
Query: 324 QGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGI-EDATKLHVSNLDNGV 500
+GPL VNARPSA+TIAK+FRRT N+P Q+ L E SL A GL + E TKL+VSNLD GV
Sbjct: 54 RGPLGVNARPSAYTIAKTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDIGV 113
Query: 501 SNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMK 680
+N+DIRELFSE+GEL R+AIHY KNG+PSG+AEVV+ RRSDAF A+KRYNNV+LDG+PMK
Sbjct: 114 TNEDIRELFSEMGELVRFAIHYDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMK 173
Query: 681 VEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLP------PPNRGVFQRG 842
+EIV E+P+SAR+NV GG N + P P NRG QRG
Sbjct: 174 IEIVGSNPEIPLSARVNVVGGTN---------RRRTVVMAPGGPARGRGGATNRGSSQRG 224
Query: 843 RGGMLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPK 1022
RGG RN +
Sbjct: 225 RGG-FRNA------------------------PGRGRGGGGGRGWGRSRGRGGRGSNRAA 259
Query: 1023 EKSADELDKELDKYH--AEAMET 1085
+KSA++LDKELD YH A+AM+T
Sbjct: 260 DKSAEDLDKELDSYHANADAMQT 282
>ref|XP_004250178.1| PREDICTED: uncharacterized protein LOC101256343 [Solanum
lycopersicum]
Length = 283
Score = 205 bits (522), Expect = 3e-50
Identities = 126/263 (47%), Positives = 155/263 (58%), Gaps = 9/263 (3%)
Frame = +3
Query: 324 QGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGI-EDATKLHVSNLDNGV 500
+GPL VNARPSA+TIAK+FRRT N+P Q+ L E SL A GL + E TKL+VSNLD GV
Sbjct: 54 RGPLGVNARPSAYTIAKTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDVGV 113
Query: 501 SNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMK 680
+N+DIRELFSE+GEL R+AIHY KNG+PSG+AEVV+ RRSDAF A+KRYNNV+LDG+PMK
Sbjct: 114 TNEDIRELFSEMGELVRFAIHYDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMK 173
Query: 681 VEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLP------PPNRGVFQRG 842
+EIV E+P+SAR+NV GG N + P P +RG QRG
Sbjct: 174 IEIVGSNPEIPLSARVNVVGGTN---------RRRTVVMAPGGPARGRGAATSRGSSQRG 224
Query: 843 RGGMLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPK 1022
RGG LRN +
Sbjct: 225 RGG-LRNA-----------------------PGRGRGGGGGRGWGRGRGRGGRGSSSRGA 260
Query: 1023 EKSADELDKELDKYH--AEAMET 1085
+KSA++LDKELD YH A+AM+T
Sbjct: 261 DKSAEDLDKELDSYHANADAMQT 283
>ref|XP_006482106.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
gi|568857100|ref|XP_006482107.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Citrus sinensis]
Length = 291
Score = 204 bits (519), Expect = 7e-50
Identities = 105/147 (71%), Positives = 121/147 (82%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL NARPS++TIAKSFRRT N P QHDL E SL A G+ GIE TKL+VSNL
Sbjct: 49 GAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
GV+NDDIRELFSEIGELKRYAIH+ KNG+PSGSAEVVY RRSDAFAA+KRYNNV LDG+
Sbjct: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNG 752
PMK+E+V +E+P+ AR+NV GVNG
Sbjct: 168 PMKIEVVGTNAEIPLQARVNV-TGVNG 193
>ref|XP_006430579.1| hypothetical protein CICLE_v10012354mg [Citrus clementina]
gi|557532636|gb|ESR43819.1| hypothetical protein
CICLE_v10012354mg [Citrus clementina]
Length = 206
Score = 204 bits (519), Expect = 7e-50
Identities = 105/147 (71%), Positives = 121/147 (82%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL NARPS++TIAKSFRRT N P QHDL E SL A G+ GIE TKL+VSNL
Sbjct: 49 GAARRGPLS-NARPSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLH 107
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
GV+NDDIRELFSEIGELKRYAIH+ KNG+PSGSAEVVY RRSDAFAA+KRYNNV LDG+
Sbjct: 108 PGVTNDDIRELFSEIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGK 167
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNG 752
PMK+E+V +E+P+ AR+NV GVNG
Sbjct: 168 PMKIEVVGTNAEIPLQARVNV-TGVNG 193
>ref|XP_004503129.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
Length = 295
Score = 203 bits (516), Expect = 1e-49
Identities = 100/147 (68%), Positives = 119/147 (80%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLD 491
G +GPL VN RPS+F IAKS RRT P Q+DL E SL A G+ G+E TKL+VSNLD
Sbjct: 60 GAVRRGPLMVNTRPSSFAIAKSIRRTKPFPMQNDLFEDSLRAAGIQGVEADTKLYVSNLD 119
Query: 492 NGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGR 671
GV+N+DIRELFSE+G+LKRYA+HY KNG P+GSAEVVY RRSDAFAA+KRYNNV LDG+
Sbjct: 120 RGVTNEDIRELFSELGDLKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGK 179
Query: 672 PMKVEIVTPKSELPVSARINVFGGVNG 752
PMK+EIV SELP++AR+NV G+NG
Sbjct: 180 PMKIEIVGTNSELPITARVNV-TGING 205
>gb|EOY14344.1| RNA-binding family protein, putative isoform 1 [Theobroma cacao]
Length = 262
Score = 200 bits (509), Expect = 9e-49
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = +3
Query: 324 QGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLDNGVS 503
+GPL VN RPS +IAKS RT + P QHDL E SL A G+ G+E TKL+VSNLD GV+
Sbjct: 48 RGPLAVNTRPSQHSIAKSSHRTRSTPWQHDLFEDSLRAAGISGVEVGTKLYVSNLDLGVT 107
Query: 504 NDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMKV 683
N+DIRELFSEIGELKRYA+HY KNG+PSGSAEVVY RRSDAFAA+KRYNNV LDG+PMK+
Sbjct: 108 NEDIRELFSEIGELKRYAVHYDKNGRPSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMKI 167
Query: 684 EIVTPKSELPVSARINVFGGVNG 752
EIV +E+P+SAR+NV G+NG
Sbjct: 168 EIVGANAEVPISARVNV-TGING 189
>ref|XP_006602008.1| PREDICTED: THO complex subunit 4-like isoform X2 [Glycine max]
Length = 273
Score = 196 bits (498), Expect = 2e-47
Identities = 116/238 (48%), Positives = 135/238 (56%)
Frame = +3
Query: 375 SFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLDNGVSNDDIRELFSEIGELKRY 554
S RR P QHDL E SL A G+ G+E TKL+VSNLD+GV+N+DIRELFSE+GELKR+
Sbjct: 60 SIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSELGELKRF 119
Query: 555 AIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMKVEIVTPKSELPVSARINV 734
A+HY KNG PSGSAEVVYTRRSDAFAA+KRYNNV LDG+PMK+EIV SELP+SAR+NV
Sbjct: 120 AVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNSELPISARVNV 179
Query: 735 FGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGGMLRNTXXXXXXXXXXXXXXXX 914
GVNG PNRG + RGG +
Sbjct: 180 -TGVNGRRKRTVVMTPRGGQAGGGPTMPNRGAGRGRRGGPRSGS---------------- 222
Query: 915 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKSADELDKELDKYHAEAMETS 1088
+K EKSA+ELDKEL+ YHAEAM S
Sbjct: 223 -------GRGGGGGRGRGRGSRGGGGGRGRGRKDAVEKSAEELDKELETYHAEAMNIS 273
>ref|XP_004236691.1| PREDICTED: THO complex subunit 4-A-like [Solanum lycopersicum]
Length = 272
Score = 196 bits (497), Expect = 2e-47
Identities = 120/261 (45%), Positives = 150/261 (57%), Gaps = 3/261 (1%)
Frame = +3
Query: 312 GRFPQGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLP-GIEDATKLHVSNL 488
G +G L VNARPSA IAKSF RT N+P Q+ L+E SL A G+ G+E TK++VSNL
Sbjct: 45 GALRKGALGVNARPSANRIAKSFHRTKNLPWQNGLLEDSLRAAGISSGLESGTKVYVSNL 104
Query: 489 DNGVSNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDG 668
D GV+N DIRELF+E+GEL RYAIHY KNG+PSGSAEVV+ RRSDA+ A+KRYNNV+LDG
Sbjct: 105 DVGVTNSDIRELFAEMGELIRYAIHYDKNGRPSGSAEVVFARRSDAYQALKRYNNVQLDG 164
Query: 669 RPMKVEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRG 848
+PMK+EIV PK ++P+SAR++V G NG NRG QRG G
Sbjct: 165 KPMKIEIVAPKPDIPLSARVDV-GRANGRRTVVMMPGSVRG--RGGASAANRGSSQRGHG 221
Query: 849 GMLRNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEK 1028
G+ +K EK
Sbjct: 222 GL------------------------------GNASGRGRGRGRGGRGRGGRGRKNGVEK 251
Query: 1029 SADELDKELDKYH--AEAMET 1085
SA++LDKEL+ YH A+AM+T
Sbjct: 252 SAEDLDKELENYHASADAMQT 272
>ref|XP_006346755.1| PREDICTED: THO complex subunit 4-like [Solanum tuberosum]
Length = 276
Score = 195 bits (495), Expect = 4e-47
Identities = 120/257 (46%), Positives = 149/257 (57%), Gaps = 3/257 (1%)
Frame = +3
Query: 324 QGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLP-GIEDATKLHVSNLDNGV 500
+G L VNARPSA IAKSFRRT N+P Q+ L+E SL A G+ G+E TK++VSNLD GV
Sbjct: 49 KGALGVNARPSANRIAKSFRRTKNLPWQNGLLEDSLRAAGVSSGLETGTKVYVSNLDVGV 108
Query: 501 SNDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMK 680
+N DIRELF+E+GEL RYAIHY KNG+PSGSAEVV+ RRSDA+ A+KRYNNV+LDG+PMK
Sbjct: 109 TNSDIRELFAEMGELIRYAIHYDKNGRPSGSAEVVFARRSDAYQALKRYNNVQLDGKPMK 168
Query: 681 VEIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGVFQRGRGGMLR 860
+EIV PK ++P+SAR++V G NG NRG QRG GG+
Sbjct: 169 IEIVAPKPDIPLSARVDV-GRANGRRTVVMMPGSARG--RGGASAANRGSSQRGHGGL-- 223
Query: 861 NTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKSADE 1040
K EKSA++
Sbjct: 224 ------------------------GNAPGRGRGRGRGRGRGGRGRGGRGSKNGVEKSAED 259
Query: 1041 LDKELDKYH--AEAMET 1085
LDKEL+ YH A+AM+T
Sbjct: 260 LDKELENYHANADAMQT 276
>ref|XP_006826913.1| hypothetical protein AMTR_s00010p00163740 [Amborella trichopoda]
gi|548831342|gb|ERM94150.1| hypothetical protein
AMTR_s00010p00163740 [Amborella trichopoda]
Length = 269
Score = 194 bits (493), Expect = 7e-47
Identities = 112/252 (44%), Positives = 144/252 (57%), Gaps = 1/252 (0%)
Frame = +3
Query: 324 QGPLRVNARPSAFTIAKSFRRTNNIPRQHDLIEASLAAVGLPGIEDATKLHVSNLDNGVS 503
+GPLR+N RPS+++IAKSF RT ++ QHD+ E S+ A GL GIE TKL++SNLD GVS
Sbjct: 47 RGPLRLNPRPSSYSIAKSFSRTKDMIWQHDMFEDSMIAAGLTGIESGTKLYISNLDYGVS 106
Query: 504 NDDIRELFSEIGELKRYAIHYGKNGQPSGSAEVVYTRRSDAFAAIKRYNNVRLDGRPMKV 683
N+DIRELFSEIG +KR A+HY ++G+ SGSAEVV+T+RS+A AA+KRYNNV+LDG+PMK+
Sbjct: 107 NEDIRELFSEIGPIKRCAVHYDRSGRSSGSAEVVFTKRSNALAAVKRYNNVQLDGKPMKI 166
Query: 684 EIVTPKSELPVSARINVFGGVNGASXXXXXXXXXXXXLMPMLPPPNRGV-FQRGRGGMLR 860
E++ +PVSAR+NV GG MP + G + RGRGG R
Sbjct: 167 ELIGTNLGMPVSARVNVTGGAGRGRRTVVMTPEFGP--MPGVVSGGHGTRWGRGRGGFRR 224
Query: 861 NTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKQPKEKSADE 1040
+ P KSADE
Sbjct: 225 G----------------------------GRGGRGRGVGGRGRGRGRGRNQAPPPKSADE 256
Query: 1041 LDKELDKYHAEA 1076
LDKEL+ YHA A
Sbjct: 257 LDKELESYHANA 268