BLASTX nr result
ID: Rheum21_contig00013314
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00013314
(846 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A... 115 2e-23
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 111 3e-22
ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein A... 110 8e-22
gb|EMJ22900.1| hypothetical protein PRUPE_ppb013507mg [Prunus pe... 109 1e-21
gb|EMJ08808.1| hypothetical protein PRUPE_ppa018907mg, partial [... 107 7e-21
ref|XP_004305978.1| PREDICTED: uncharacterized protein LOC101292... 104 5e-20
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A... 102 2e-19
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 98 4e-18
ref|XP_006338028.1| PREDICTED: uncharacterized protein LOC102597... 98 4e-18
ref|XP_004308776.1| PREDICTED: putative ribonuclease H protein A... 97 7e-18
ref|XP_004238018.1| PREDICTED: uncharacterized protein LOC101261... 97 9e-18
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 95 3e-17
gb|ABA97040.1| retrotransposon protein, putative, unclassified [... 95 4e-17
ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein A... 94 6e-17
ref|XP_004305178.1| PREDICTED: putative ribonuclease H protein A... 93 1e-16
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 92 2e-16
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 91 5e-16
ref|XP_004298011.1| PREDICTED: uncharacterized protein LOC101296... 91 7e-16
gb|EOX96783.1| Uncharacterized protein TCM_005954 [Theobroma cacao] 90 9e-16
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 90 9e-16
>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 487
Score = 115 bits (288), Expect = 2e-23
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Frame = -2
Query: 821 DQCALCGSMSETREHLFFECIHTSQVIQHFNTIAGQNITTSGTADFIQDFTNL-VNQTSQ 645
+ C LC S +ET +HLF C T++V + +AG + +++ + +NQ
Sbjct: 201 NSCPLCDSDNETADHLFGHCDFTTEVFR----LAGISALMDWHEGYLKVLREMFINQPYD 256
Query: 644 QENVKTLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHTKGTRKR 465
+ ++ ++ IW ARN+ IFR+ +T+ +A A F F +TA + G +
Sbjct: 257 KFLFAKVLIIYWQIWKARNDTIFRDVITTATNVAATAAFHFN--ETALYKAVVGGGISQT 314
Query: 464 NRRLIRNQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKT 285
IR W P + KINFDGS + ++ G++ R+SDG ++ +G I
Sbjct: 315 TSSTIR---WLPPHNNFIKINFDGSVQGRSAAGGFVFRNSDGNVILAAAKGLGSTTIPTA 371
Query: 284 EALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSF 105
EA A + A N+ +EGD+ VI+AI PW ++ I+ DI+ + F S
Sbjct: 372 EATALRDSLVKARDRGYMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDIRTIATSFSSV 431
Query: 104 QVFHTFREANTAAD 63
H +REAN AD
Sbjct: 432 CFNHVYREANFMAD 445
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 111 bits (278), Expect = 3e-22
Identities = 79/269 (29%), Positives = 127/269 (47%), Gaps = 12/269 (4%)
Frame = -2
Query: 827 VTDQCALCGSMSETREHLFFECIHTSQVIQH----FNTIAGQNITTSGTADFIQDFTNLV 660
V C C SET HL F+C T + H F A + ++ +
Sbjct: 1086 VPQNCCFCDCPSETICHLCFQCPFTLDIYSHLEDKFQWPAYPSWFSTLQLSSFRSVLEAC 1145
Query: 659 NQTSQQENVKTLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHTK 480
+ E + L +W ++W RN +IF N+ TS Q + + W+ A +
Sbjct: 1146 HINLTLEYLTKLSIVWWHVWYFRNKLIFNNESTSFSQASFIIHSFMGKWEKANLEIPSFN 1205
Query: 479 GTRKRNRRLI----RNQTWKQPSPGWCKINFDGSAKSD-HSSIGYICRDSDGKILFVGNS 315
++ +L +N W P+ K+NFDGS + ++ G++ R+S+G++L
Sbjct: 1206 TPLPKDCKLPVRSGKNLIWSPPNEDVLKVNFDGSKLDNGQAAYGFVIRNSNGEVLMARAK 1265
Query: 314 HIG-HNNILKTEALAALKGIQ--VAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTII 144
+G + +IL EA+ L+GI+ +++Q + II EGDN++VINA+ PW I II
Sbjct: 1266 ALGVYPSILMAEAMGLLEGIKGAISLQNWSRKIIFEGDNIAVINAMSPSATGPWTIANII 1325
Query: 143 DDIQHLLNKFHSFQVFHTFREANTAADFL 57
D LL F + H +REAN ADF+
Sbjct: 1326 LDAGALLGHFQEVKFQHCYREANRLADFM 1354
>ref|XP_004305406.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 399
Score = 110 bits (274), Expect = 8e-22
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 1/254 (0%)
Frame = -2
Query: 821 DQCALCGSMSETREHLFFECIHTSQVIQHFNTIAGQNITTSGTADFIQDFTNL-VNQTSQ 645
+ C LC + +ET +HLF C T++V + + G + +++ + +NQ
Sbjct: 109 NSCPLCDNDNETADHLFGHCDFTTEVFR----LVGISAPMDWHKGYLKVLREMFINQPYD 164
Query: 644 QENVKTLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHTKGTRKR 465
+ ++ ++ IW ARN+ IFR+ +T+ + A F F +TA + G +
Sbjct: 165 KFLFAKVLIIYWQIWKARNDTIFRDVITTATNVVATAAFHFN--ETALYKAVVGGGISQT 222
Query: 464 NRRLIRNQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKT 285
IR W P + KINFDGS + + G++ R+SDG ++ +G I
Sbjct: 223 TPSTIR---WLPPHNNFIKINFDGSVQGRSAVGGFVFRNSDGNVILAAAKGLGSTTIPTA 279
Query: 284 EALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSF 105
EA A + A N+ +EGD+ VI+AI PW ++ I+ DI+ + F S
Sbjct: 280 EATALRDNLVKARDRGYMNVQVEGDSKLVIDAINGKLSPPWRLQKIVQDIRTIATSFSSV 339
Query: 104 QVFHTFREANTAAD 63
H +REAN AD
Sbjct: 340 CFNHVYREANFVAD 353
>gb|EMJ22900.1| hypothetical protein PRUPE_ppb013507mg [Prunus persica]
Length = 363
Score = 109 bits (272), Expect = 1e-21
Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 9/264 (3%)
Frame = -2
Query: 791 ETREHLFFEC---IHTSQVIQHFNTIAGQNITTSGTADFIQDFTNLVN-QTSQQENV--K 630
ET HLFFEC ++ + F A QN D I+ +L + + + NV K
Sbjct: 68 ETINHLFFECQFAVNIYRCTYFFPNYAHQN------CDGIEWLASLPHTKVADGSNVLSK 121
Query: 629 TLIFLWNNIWTARNNMIFRNKVTSPKQIAEQA-YFQFINWKTATTQQDHTKGTRKRNRRL 453
L+ W IW ARNN IF++ P ++ A + WKT + K T K N +
Sbjct: 122 ALLLCWQ-IWEARNNCIFKDIDLHPVRVLNVAGHIGLDYWKTNSCLPQ--KSTGKVNIK- 177
Query: 452 IRNQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKTEALA 273
W+ P W K+NFDGS + + ++ G++ RD +G + G + G +I E LA
Sbjct: 178 -----WEPPPLDWVKVNFDGSVRGNLAATGFVIRDWNGNVRLAGTKNSGQVSITVAECLA 232
Query: 272 ALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQVFH 93
G+ AI + I++EGD+ +I+ I + +PW I ++ DI L + H
Sbjct: 233 LRDGLAHAIHKGWQKILVEGDSKLIIDCINNLISVPWSISLLVQDIWLLSSYCEEISFKH 292
Query: 92 TFREANTAADFLTS--NELDLDWI 27
F EAN AD + S + L W+
Sbjct: 293 IFWEANFTADAVASLGHSLTPSWL 316
>gb|EMJ08808.1| hypothetical protein PRUPE_ppa018907mg, partial [Prunus persica]
Length = 1566
Score = 107 bits (266), Expect = 7e-21
Identities = 75/270 (27%), Positives = 115/270 (42%), Gaps = 11/270 (4%)
Frame = -2
Query: 827 VTDQCALCGSMSETREHLFFECIHTSQV----------IQHFNTIAGQNITTSGTADFIQ 678
+ +C LC + ET HLFFEC + + H G NI +
Sbjct: 1293 IDPECPLCKNHMETINHLFFECQFAVNIWRCIIEWLASLPHTKAADGPNILS-------- 1344
Query: 677 DFTNLVNQTSQQENVKTLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFIN-WKTAT 501
K L+ W IW ARNN IF++ P ++ A ++ WK +
Sbjct: 1345 ---------------KALLLCWQ-IWEARNNCIFKDIDPHPVRVLNVAGRIGLDYWKINS 1388
Query: 500 TQQDHTKGTRKRNRRLIRNQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVG 321
K T K N + W+ P W K+NFDGS + + ++ G++ RD +G + G
Sbjct: 1389 CPPQ--KSTGKVNIK------WEPPPLDWVKVNFDGSMRGNLAATGFVIRDWNGNVRLAG 1440
Query: 320 NSHIGHNNILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIID 141
+ G +I E A G+ AI + I +EGD+ +I+ + + +PW I ++
Sbjct: 1441 TKNSGQVSITVAECFALRDGLAHAIHKGWRKIFVEGDSKLIIDCVNNLVSVPWSISLLVQ 1500
Query: 140 DIQHLLNKFHSFQVFHTFREANTAADFLTS 51
DI+ L H FREAN AD + S
Sbjct: 1501 DIRLLSFYCEEISFKHIFREANFTADAVAS 1530
>ref|XP_004305978.1| PREDICTED: uncharacterized protein LOC101292333 [Fragaria vesca
subsp. vesca]
Length = 258
Score = 104 bits (259), Expect = 5e-20
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 7/252 (2%)
Frame = -2
Query: 782 EHLFFECIHTSQV--IQHFNTIAGQNITTSGTADFIQDFTNL-VNQTSQQENVKTLIFLW 612
+H F C + V + H N ++ N D ++ ++ +N+ + + +I L
Sbjct: 2 DHSFCHCPSSLAVWNLAHCNDLSNAN-------DMVETLNDIFINRPYDADKLSKIILLC 54
Query: 611 NNIWTARNNMIFRNKVTSPKQIAE--QAYFQFINWKTATTQQDHTKGTRKRNRRLIRNQT 438
IW R N+IFRN++ SP + A+ + +N +T T+ N
Sbjct: 55 WQIWQKRKNVIFRNEIFSPHAVVAGAAAFTRRLNSQTNTSSCVAAHSN---------NIK 105
Query: 437 WKQPSPGWCKINFDGSAKSDHSSI--GYICRDSDGKILFVGNSHIGHNNILKTEALAALK 264
W PS G+ K+NFDG +S+ G++ RD G L IG ++ E +A
Sbjct: 106 WSLPSSGYVKLNFDGYVFQHNSNFASGFVLRDDSGCPLIAYTRRIGKTDVPIAEVVALRD 165
Query: 263 GIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQVFHTFR 84
G+ A I +I EGD+ VIN IK IP ++ +I+ DI H+ +F HTF+
Sbjct: 166 GLLSARNRNISRVIAEGDSQLVINCIKSTTSIPSKLSSIVKDIIHIATRFEHISFSHTFQ 225
Query: 83 EANTAADFLTSN 48
EAN A+ + ++
Sbjct: 226 EANFIANVVANH 237
>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 727
Score = 102 bits (253), Expect = 2e-19
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
Frame = -2
Query: 794 SETREHLFFECIHTSQVIQHFNTIAGQNITTSGTADFIQDFTNLVNQTSQQEN--VKTLI 621
+ET +HLF +C + V + A + G+ F+ + + + +N K L
Sbjct: 451 NETLDHLFGDCTIATNVWRK----ACLHDLIHGSDTFLNKLNLFLRKRNYNKNDFEKILT 506
Query: 620 FLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHTKGTRKRNRRLIRNQ 441
W IW ARN+ FRN TSP I A +K ++ R + +
Sbjct: 507 ICWM-IWKARNDASFRNISTSPLTIISVAASIEKGFK------ENNMNCRVGSFKTPSAI 559
Query: 440 TWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKTEALAALKG 261
W+ P K+NFDGS S ++ G I R+S+G + + +IG ++ TEA A
Sbjct: 560 KWQPPPASTFKVNFDGSVTSSSAACGTIIRNSEGVPIITSSKNIGKASVPTTEATALRDS 619
Query: 260 IQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQVFHTFRE 81
I +A + II+EGD+ +I+ + PW ++ II+DI++L +F H +RE
Sbjct: 620 ILIAKNRGLTRIIVEGDSKIIIDVVNGKISTPWRLQQIIEDIKNLAQEFQEICFNHIYRE 679
Query: 80 ANTAAD 63
AN AAD
Sbjct: 680 ANFAAD 685
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 97.8 bits (242), Expect = 4e-18
Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 18/283 (6%)
Frame = -2
Query: 827 VTDQCALC--GSMSETREHLFFECIHTSQVIQHFNTIAGQNITTSGTADFIQDFTNLV-- 660
V +C C G M ET HL ++ + F + AG I I + +
Sbjct: 530 VVSKCYCCKEGEM-ETMTHLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDYKAS 588
Query: 659 NQTSQQENVKTLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHTK 480
N+ SQ + +W +W RN+ K T+ + Q Q I ++ T + K
Sbjct: 589 NKLSQILKAVLAVIMWE-LWKRRNSYR-HGKETTYNNMYYQC--QLILYQLVTIKFPWIK 644
Query: 479 GTRKRNRRLI------------RNQTWKQPSPGWCKINFDGSAKSDH--SSIGYICRDSD 342
G +++ + W++PS GW N DG++K + SS GY RD +
Sbjct: 645 GLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKN 704
Query: 341 GKILFVGNSHIGHNNILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPW 162
G +L+ +IG ++ EA K +Q + ++ + LE D+L++ N I R WKIPW
Sbjct: 705 GDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPW 764
Query: 161 EIRTIIDDIQHLLNKFHSFQVFHTFREANTAADFLTSNELDLD 33
E+ +++I ++ + QV H +RE N ADF+ + ++ +
Sbjct: 765 ELVEKLEEIHEIMQQI-DVQVCHVYREVNQLADFIANTTINTE 806
>ref|XP_006338028.1| PREDICTED: uncharacterized protein LOC102597125 isoform X1 [Solanum
tuberosum]
Length = 300
Score = 97.8 bits (242), Expect = 4e-18
Identities = 50/140 (35%), Positives = 79/140 (56%)
Frame = -2
Query: 461 RRLIRNQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKTE 282
RR +R TWK+P PGW K+N DGS + +G + RD +G + S + +I E
Sbjct: 129 RRPLRCCTWKKPKPGWTKLNTDGSIDRKRAGLGGLLRDDEGVAICACVSEVTCGDIFLVE 188
Query: 281 ALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQ 102
LA +G+ +A+ IK I +E D++S + AI + + + + I +LNKF +Q
Sbjct: 189 LLAIWRGLMLAVSIGIKVIWVESDSMSAVKAINKEQPHNQKAASCLQHIWKILNKFQKYQ 248
Query: 101 VFHTFREANTAADFLTSNEL 42
V H++RE N AAD+L+ E+
Sbjct: 249 VTHSWRETNRAADYLSKMEI 268
>ref|XP_004308776.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 256
Score = 97.1 bits (240), Expect = 7e-18
Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Frame = -2
Query: 647 QQENVKT----LIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHTK 480
Q E++ T LI W IW ARNN+IFR+ +P A F + + +
Sbjct: 5 QNEDIVTTKNCLIICWQ-IWKARNNVIFRSVNFAP------ADFVHASAAVGASYRAFNL 57
Query: 479 GTRKRNRRLIRNQTWKQPSPGWCKINFDGSAKS-DHSSIGYICRDSDGKILFVGNSHIGH 303
T + R W P G K+NFDGS S D + ++ RD +G IL G+ ++G+
Sbjct: 58 ATERSPRNYPDLIKWHPPPNGVVKLNFDGSVSSNDGGAASFVIRDHNG-ILVAGSRNLGN 116
Query: 302 NNILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLL 123
++ E+ A G+Q ++ I +EGD +IN ++ IPW I + I +I HL
Sbjct: 117 VSVPVAESAALKDGLQAVKRFNYLKIQMEGDAALIINYVQGKCDIPWRIISFIKEIAHLS 176
Query: 122 NKFHSFQVFHTFREANTAADFLTS 51
+ F S H +REAN AD + S
Sbjct: 177 DSFESIAFAHIYREANFLADVVAS 200
>ref|XP_004238018.1| PREDICTED: uncharacterized protein LOC101261323 [Solanum
lycopersicum]
Length = 332
Score = 96.7 bits (239), Expect = 9e-18
Identities = 49/140 (35%), Positives = 79/140 (56%)
Frame = -2
Query: 461 RRLIRNQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKTE 282
RR +R TWK+P PGW K+N DGS + +G + RD +G + S + ++I E
Sbjct: 161 RRPLRCCTWKKPKPGWTKLNTDGSIDRKRAGLGGLLRDYEGAAICACVSEVTCDDIFLVE 220
Query: 281 ALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQ 102
LA +G+ +A+ IK I +E D++ + AI + + + + I +LNKF +Q
Sbjct: 221 LLAIWRGLMLAVSIGIKMIWVESDSMGAVKAINKEQPHNQKAASCLQHIWKMLNKFQKYQ 280
Query: 101 VFHTFREANTAADFLTSNEL 42
V H++RE N AAD+L+ E+
Sbjct: 281 VTHSWRETNRAADYLSKMEI 300
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 95.1 bits (235), Expect = 3e-17
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 14/270 (5%)
Frame = -2
Query: 815 CALCGSMSETREHLFFECIHTSQVIQHFNTIAG-QNITTSGTADFIQDFTNLVNQTSQQE 639
C + + ++ EH F ++V + F T AG Q +S A Q +T + S Q
Sbjct: 357 CCVDRTGMDSIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQL 416
Query: 638 NVKTL-IFLWNNIWTARNNMIFRNKVTSPKQIAEQAY----------FQFINWKTATTQQ 492
++ + IF+ N+W R + K T+ ++ Y F INW
Sbjct: 417 LLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINWPGNWAAL 476
Query: 491 DHTKGTRKRNRRLIRNQTWKQPSPGWCKINFDGSA--KSDHSSIGYICRDSDGKILFVGN 318
T K ++ TW +P W KIN DGSA + H G I RD +GKI+
Sbjct: 477 IQTAERCKHEIKVCMT-TWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFA 535
Query: 317 SHIGHNNILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDD 138
+ +G K EA AAL G+ A++ +NI++E D+ V+ I + W + I+
Sbjct: 536 TPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVQWISKKEPPHWNVINQIER 595
Query: 137 IQHLLNKFHSFQVFHTFREANTAADFLTSN 48
IQ L+ + +F+ H FREAN AD L+ +
Sbjct: 596 IQQLIMQTQNFKCNHIFREANWVADALSKH 625
>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 94.7 bits (234), Expect = 4e-17
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 17/248 (6%)
Frame = -2
Query: 815 CALCGSMSETREHLFFECIHTSQVIQHFNTIAGQNITTSGTADFIQDFTNLVNQTSQQEN 636
C +CG+ +E H C H + + ++ +G A F + + T +E
Sbjct: 1657 CCICGNETEDVSHALSRCPHAVHLWEAMKAAGSLSLNVAGNATGGSWFFDQIENTPAEER 1716
Query: 635 VKTLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHT--------- 483
+ + LW IW RN ++ KV P ++++ + + Q H
Sbjct: 1717 MMLCMMLW-RIWFVRNE-LYHGKVPPPIAVSKRFLESYCSSLLEIKQHPHADVVRGKHVV 1774
Query: 482 -KGTRKRNR----RLIRNQTWKQPSPGWCKINFDGSAKSDHS--SIGYICRDSDGKILFV 324
+ TR R+ R + W++P GW K+N DGS S+ S IG + RDS G ++F
Sbjct: 1775 QQPTRMRSEANHLRRVVPARWEKPQMGWMKLNVDGSYDSNSSKGGIGVVLRDSVGTVIFS 1834
Query: 323 GNSHIGH-NNILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTI 147
+ ++ L++E LA +GI +A+Q+ + IILE D L +N I+ V K ++ +
Sbjct: 1835 ACGFLERCSSPLESELLACKEGINLALQWTLLPIILESDCLIAVNMIQSVKKEMSQLAYL 1894
Query: 146 IDDIQHLL 123
+ DI+ L+
Sbjct: 1895 VRDIRELM 1902
>ref|XP_004308642.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 214
Score = 94.0 bits (232), Expect = 6e-17
Identities = 61/194 (31%), Positives = 92/194 (47%)
Frame = -2
Query: 632 KTLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINWKTATTQQDHTKGTRKRNRRL 453
K L W IW A+N++ FRN T P+ + A I Q G ++ +
Sbjct: 17 KVLTLCWQ-IWKAKNDLSFRNINTRPQTVISVA--ATIRNSYNLYNQASLGGGPQQPPEV 73
Query: 452 IRNQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKTEALA 273
I TW P KINFDGS S+ ++ G I RDS G + ++G ++ EA A
Sbjct: 74 I---TWLSPPNKTVKINFDGSVSSNSAASGAIIRDSKGNPILASTRNLGSTSVPVAEATA 130
Query: 272 ALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQVFH 93
+ + ++++EGD+ VI+ + + PW I I+DDI+ + F S H
Sbjct: 131 LRDSLLSVKEKGFIDVVVEGDSKLVIDVMTQKINPPWRIHQIVDDIRKIAESFSSISFHH 190
Query: 92 TFREANTAADFLTS 51
+REAN AAD + S
Sbjct: 191 VYREANFAADAVVS 204
>ref|XP_004305178.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 305
Score = 93.2 bits (230), Expect = 1e-16
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 1/192 (0%)
Frame = -2
Query: 623 IFLWNNIWTARNNMIFRNKVTSPKQI-AEQAYFQFINWKTATTQQDHTKGTRKRNRRLIR 447
I L+ IW ARN+ IFR K SP+ I A AY Q + + TQ N +IR
Sbjct: 82 ITLYWQIWRARNDTIFRGKNPSPRSIPAITAYDQNVG-PDSDTQTVAMPSNMSTN--MIR 138
Query: 446 NQTWKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKTEALAAL 267
W P W KINFDGS ++ ++ G++ R DGK L + G ++ EAL
Sbjct: 139 ---WTPPLSNWVKINFDGSVQNKAAAGGFVLRSDDGKPLVSAAFNSGTASVPLAEALEFR 195
Query: 266 KGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQVFHTF 87
+ A + + + +EGD+ +I+ + V PW + ++ DI+ L F S ++ H F
Sbjct: 196 NSLLCAKEKGVLKVEVEGDSKLIIDIMNGVCDPPWRLLKVVKDIKLLSCNFKSIRLKHVF 255
Query: 86 REANTAADFLTS 51
REAN A+ L +
Sbjct: 256 REANFVANALAN 267
>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 92.4 bits (228), Expect = 2e-16
Identities = 66/206 (32%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Frame = -2
Query: 629 TLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAY----------FQFINWKTATTQQDHTK 480
T IF+ N+W R + K T ++ Y F INW T T
Sbjct: 58 TPIFICWNLWKNRCASKYGGKATYISRVKYAIYKDNFKMMKNAFPHINWPAHWTALITTS 117
Query: 479 GTRKRNRRLIRNQTWKQPSPGWCKINFDGSAKSDHSSIGY--ICRDSDGKILFVGNSHIG 306
K ++ + TW +P W KIN DGSA ++ IG I RD DGK++ + +G
Sbjct: 118 ERCKHEIKVCK-VTWNRPPEEWIKINTDGSALTNPGKIGAGGIIRDKDGKLILAFATSLG 176
Query: 305 HNNILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHL 126
+ K E AAL G+ A++ KNII+E D+ V++ I + W + I IQ L
Sbjct: 177 EGSNNKAETEAALFGLVKALELGFKNIIMELDSQLVVHWINKKSAHHWSVANEIAKIQFL 236
Query: 125 LNKFHSFQVFHTFREANTAADFLTSN 48
+ + +F+ HT REAN AD L+ +
Sbjct: 237 ILQTQNFKCQHTLREANWVADSLSKH 262
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 90.9 bits (224), Expect = 5e-16
Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 10/264 (3%)
Frame = -2
Query: 815 CALCGSMSETREHLFFECIHTSQVIQHFNTIAGQNITTSGTADFIQDFTNLVNQTSQQEN 636
C C + ET H+ F C + +QV+ +G N D +++ L+ Q + +N
Sbjct: 1426 CQRCCNADETINHIIFTCSY-AQVVWRSANFSGSNRLCF--TDNLEENIRLILQGKKNQN 1482
Query: 635 VKTL-----IFLWNNIWTARNNMIFRNKVTSPKQIAEQAYFQFINW-KTATTQQDHTKGT 474
+ L ++ +W +RN +F+ P ++A++A + W +T + T
Sbjct: 1483 LPILNGLMPFWIMWRLWKSRNEYLFQQLDRFPWKVAQKAEQEATEWVETMVNDTAISHNT 1542
Query: 473 RKRN-RRLIRNQTWKQPSPGWCKINFDGS--AKSDHSSIGYICRDSDGKILFVGNSHIGH 303
+ N R L R++ W P G+ K NFD D++S G+I RD +G++L G + +
Sbjct: 1543 AQSNDRPLSRSKQWSSPPEGFLKCNFDSGYVQGRDYTSTGWILRDCNGRVLHSGCAKLQQ 1602
Query: 302 N-NILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHL 126
+ + L+ EAL L +Q+ + EGDNL + N I + + + T++ DI+
Sbjct: 1603 SYSALQAEALGFLHALQMVWIRGYCYVWFEGDNLELTNLINKT-EDHHLLETLLYDIRFW 1661
Query: 125 LNKFHSFQVFHTFREANTAADFLT 54
+ K + + RE N AAD LT
Sbjct: 1662 MTKLPFSSIGYVNRERNLAADKLT 1685
>ref|XP_004298011.1| PREDICTED: uncharacterized protein LOC101296373 [Fragaria vesca
subsp. vesca]
Length = 204
Score = 90.5 bits (223), Expect = 7e-16
Identities = 47/125 (37%), Positives = 71/125 (56%)
Frame = -2
Query: 437 WKQPSPGWCKINFDGSAKSDHSSIGYICRDSDGKILFVGNSHIGHNNILKTEALAALKGI 258
W P+ W K+NFDGS ++ GYI R+S+G L G + +N+ +E LA G+
Sbjct: 39 WIPPATNWVKLNFDGSVSDASAAAGYILRNSNGNPLVAGARRLYSSNVPVSECLALKDGL 98
Query: 257 QVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQVFHTFREA 78
A + K +++EGD+L VIN+++ PW+I+ I+ DI HL + F + H FREA
Sbjct: 99 LAAKLFNHKILLVEGDSL-VINSLRDPANAPWKIKPILCDILHLAHWFENISFTHIFREA 157
Query: 77 NTAAD 63
N D
Sbjct: 158 NFMTD 162
>gb|EOX96783.1| Uncharacterized protein TCM_005954 [Theobroma cacao]
Length = 1134
Score = 90.1 bits (222), Expect = 9e-16
Identities = 52/132 (39%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
Frame = -2
Query: 437 WKQPSPGWCKINFDGSAKSD-HSSIGYICRDSDGKILFVGNSHIGHNNILKTEALAALKG 261
WK+PS G K+N DGS+++ H++ G + RD GK++F + +IG N L+ E A L+G
Sbjct: 969 WKKPSIGEYKLNVDGSSRNGLHAATGGVLRDHTGKLIFGFSENIGPCNSLQAELRALLRG 1028
Query: 260 IQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDDIQHLLNKFHSFQVFHTFRE 81
+ + + I+ + +E D L+ I I+ K P++IR +++ I+ L+ F S+++ HTFRE
Sbjct: 1029 LLLCKERHIEKLWIEMDALAAIQLIQPSKKGPYDIRYLLESIRMCLSSF-SYRLSHTFRE 1087
Query: 80 ANTAADFLTSNE 45
N AAD+L SNE
Sbjct: 1088 GNKAADYL-SNE 1098
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 90.1 bits (222), Expect = 9e-16
Identities = 75/270 (27%), Positives = 120/270 (44%), Gaps = 14/270 (5%)
Frame = -2
Query: 815 CALCGSMSETREHLFFECIHTSQVIQHFNTIAGQNITTSGTADFIQDF-TNLVNQTSQQE 639
C + +T EH+F + V F AG S I+ + T N +
Sbjct: 154 CCFDRAGMDTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGHKL 213
Query: 638 NVK-TLIFLWNNIWTARNNMIFRNKVTSPKQIAEQAY----------FQFINWKTATTQQ 492
++ T IF+ N+W R + K T+ ++ Y F INW T
Sbjct: 214 LLQATPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSFPSINWPANWTTL 273
Query: 491 DHTKGTRKRNRRLIRNQTWKQPSPGWCKINFDGSAKSDHSSIGY--ICRDSDGKILFVGN 318
T N ++ + TW +P W KIN DGSA ++ IG I RD +GK++ +
Sbjct: 274 ILTSEKCVHNIKVYK-VTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFS 332
Query: 317 SHIGHNNILKTEALAALKGIQVAIQYKIKNIILEGDNLSVINAIKRVWKIPWEIRTIIDD 138
+ +G + + E AAL G+ A + KNI+LE D+ V+ I PW + ++
Sbjct: 333 TPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLER 392
Query: 137 IQHLLNKFHSFQVFHTFREANTAADFLTSN 48
+Q ++ + +F+ H FREAN AD L+ +
Sbjct: 393 LQQIIIQTQNFRCCHIFREANWVADALSKH 422