BLASTX nr result

ID: Rheum21_contig00013220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00013220
         (248 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY18674.1| Zinc finger (C3HC4-type RING finger) family prote...    59   9e-07

>gb|EOY18674.1| Zinc finger (C3HC4-type RING finger) family protein [Theobroma
           cacao]
          Length = 723

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 37/63 (58%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +2

Query: 59  MGSKWRKAKLALGLNRRYYDPATAGGDESAPPSNS-FSDAALLSRRAVGEDENSSLSSHP 235
           MGSKWRKAKLALGLN   Y P T   D SAPPS+   SDAALLS      +  S  SS P
Sbjct: 1   MGSKWRKAKLALGLNLCAYLPRTLDDDYSAPPSSERLSDAALLS----PSNWESMASSRP 56

Query: 236 STP 244
            TP
Sbjct: 57  MTP 59


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