BLASTX nr result
ID: Rheum21_contig00013052
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00013052
(415 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004495537.1| PREDICTED: zinc finger CCCH domain-containin... 52 7e-11
ref|XP_002882253.1| hypothetical protein ARALYDRAFT_477525 [Arab... 64 3e-10
ref|XP_004971057.1| PREDICTED: zinc finger CCCH domain-containin... 55 4e-10
ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containin... 60 9e-10
ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containin... 60 9e-10
emb|CBI17647.3| unnamed protein product [Vitis vinifera] 60 9e-10
gb|EOY09893.1| Zinc finger CCCH domain-containing protein 33 iso... 60 1e-09
ref|XP_004250094.1| PREDICTED: zinc finger CCCH domain-containin... 61 1e-09
gb|AAD33769.1|AF138743_1 zinc finger protein 1 [Arabidopsis thal... 62 1e-09
gb|EOY09894.1| Zinc finger CCCH domain-containing protein 33 iso... 60 1e-09
ref|NP_566183.1| zinc finger protein 1 [Arabidopsis thaliana] gi... 62 1e-09
gb|AAF26977.1|AC018363_22 zinc finger protein 1 (zfn1) [Arabidop... 62 1e-09
tpg|DAA56151.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea m... 54 1e-09
gb|ACF80171.1| unknown [Zea mays] gi|414879022|tpg|DAA56153.1| T... 54 1e-09
gb|EMJ06401.1| hypothetical protein PRUPE_ppa005813mg [Prunus pe... 60 1e-09
ref|XP_006296584.1| hypothetical protein CARUB_v100138730mg, par... 62 1e-09
ref|NP_001132883.1| uncharacterized protein LOC100194377 [Zea ma... 54 2e-09
ref|XP_002512627.1| nucleic acid binding protein, putative [Rici... 59 3e-09
ref|XP_002328972.1| predicted protein [Populus trichocarpa] 59 3e-09
ref|XP_002325901.2| zinc finger family protein [Populus trichoca... 58 4e-09
>ref|XP_004495537.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform X1 [Cicer arietinum]
Length = 389
Score = 51.6 bits (122), Expect(3) = 7e-11
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 79 LQKENGFP*RPGQPEWQYYMKTGDCKF 159
LQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 234 LQRENIFPDRPGQPECQFYMKTGDCKF 260
Score = 35.4 bits (80), Expect(3) = 7e-11
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 2 SSYTPLILPQGVVSVLQGDAYMGIM 76
SSYTPL++PQGV+SV AY G M
Sbjct: 198 SSYTPLVMPQGVISVPGWSAYSGQM 222
Score = 24.6 bits (52), Expect(3) = 7e-11
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 165 VCKFHHPKERFL 200
VC+FHHP +R +
Sbjct: 263 VCRFHHPHQRLI 274
>ref|XP_002882253.1| hypothetical protein ARALYDRAFT_477525 [Arabidopsis lyrata subsp.
lyrata] gi|297328093|gb|EFH58512.1| hypothetical protein
ARALYDRAFT_477525 [Arabidopsis lyrata subsp. lyrata]
Length = 397
Score = 63.9 bits (154), Expect(2) = 3e-10
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 28 SGSGFSPSRGC-IHGYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
S SGF+P I GYYAL +EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 247 SFSGFNPGSSVPIGGYYALPRENVFPERPGQPECQFYMKTGDCKF 291
Score = 26.2 bits (56), Expect(2) = 3e-10
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 165 VCKFHHPKER 194
VCKFHHP++R
Sbjct: 294 VCKFHHPRDR 303
>ref|XP_004971057.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
[Setaria italica]
Length = 425
Score = 55.1 bits (131), Expect(3) = 4e-10
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 73 YALQKENGFP*RPGQPEWQYYMKTGDCKF 159
YALQ+EN FP RP QPE QYYMKTGDCKF
Sbjct: 300 YALQRENVFPERPDQPECQYYMKTGDCKF 328
Score = 28.1 bits (61), Expect(3) = 4e-10
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SSYTPLILPQGVVSVLQGDAYMG 70
S+Y P+I+PQG+V V ++Y G
Sbjct: 238 SNYAPMIVPQGLVQVPSWNSYPG 260
Score = 25.8 bits (55), Expect(3) = 4e-10
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VCKFHHP+ R L C
Sbjct: 331 VCKFHHPRVRSLPPPDC 347
>ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 60.5 bits (145), Expect(2) = 9e-10
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = +1
Query: 40 FSPSR-GCIH-GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
FSP R G + G+YALQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 276 FSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKTGDCKF 317
Score = 28.1 bits (61), Expect(2) = 9e-10
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + + C
Sbjct: 320 VCRFHHPRERLIPTPDC 336
>ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Vitis vinifera]
Length = 393
Score = 60.5 bits (145), Expect(2) = 9e-10
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = +1
Query: 40 FSPSR-GCIH-GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
FSP R G + G+YALQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 228 FSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKTGDCKF 269
Score = 28.1 bits (61), Expect(2) = 9e-10
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + + C
Sbjct: 272 VCRFHHPRERLIPTPDC 288
>emb|CBI17647.3| unnamed protein product [Vitis vinifera]
Length = 304
Score = 60.5 bits (145), Expect(2) = 9e-10
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
Frame = +1
Query: 40 FSPSR-GCIH-GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
FSP R G + G+YALQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 168 FSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKTGDCKF 209
Score = 28.1 bits (61), Expect(2) = 9e-10
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + + C
Sbjct: 212 VCRFHHPRERLIPTPDC 228
>gb|EOY09893.1| Zinc finger CCCH domain-containing protein 33 isoform 1 [Theobroma
cacao]
Length = 451
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 67 GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
G+YALQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 298 GFYALQRENVFPERPGQPECQFYMKTGDCKF 328
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER L + C
Sbjct: 331 VCRFHHPRERVLPAPDC 347
>ref|XP_004250094.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Solanum lycopersicum]
Length = 433
Score = 60.8 bits (146), Expect(2) = 1e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +1
Query: 67 GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
GYYALQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 279 GYYALQEENVFPERPGQPECQFYMKTGDCKF 309
Score = 27.3 bits (59), Expect(2) = 1e-09
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + C
Sbjct: 312 VCRFHHPRERLIPPPDC 328
>gb|AAD33769.1|AF138743_1 zinc finger protein 1 [Arabidopsis thaliana]
Length = 424
Score = 62.0 bits (149), Expect(2) = 1e-09
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 28 SGSGFSPSRGC-IHGYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
S SG++P + GYYAL +EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 247 SFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKF 291
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 165 VCKFHHPKER 194
VCKFHHP++R
Sbjct: 294 VCKFHHPRDR 303
>gb|EOY09894.1| Zinc finger CCCH domain-containing protein 33 isoform 2 [Theobroma
cacao]
Length = 411
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 67 GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
G+YALQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 258 GFYALQRENVFPERPGQPECQFYMKTGDCKF 288
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER L + C
Sbjct: 291 VCRFHHPRERVLPAPDC 307
>ref|NP_566183.1| zinc finger protein 1 [Arabidopsis thaliana]
gi|62901378|sp|Q8GXX7.1|C3H33_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 33; Short=AtC3H33;
AltName: Full=Zinc finger CCCH domain-containing protein
ZFN1 gi|26451016|dbj|BAC42614.1| putative zinc finger
protein 1 zfn1 [Arabidopsis thaliana]
gi|109134113|gb|ABG25055.1| At3g02830 [Arabidopsis
thaliana] gi|332640343|gb|AEE73864.1| zinc finger
protein 1 [Arabidopsis thaliana]
Length = 397
Score = 62.0 bits (149), Expect(2) = 1e-09
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 28 SGSGFSPSRGC-IHGYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
S SG++P + GYYAL +EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 247 SFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKF 291
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 165 VCKFHHPKER 194
VCKFHHP++R
Sbjct: 294 VCKFHHPRDR 303
>gb|AAF26977.1|AC018363_22 zinc finger protein 1 (zfn1) [Arabidopsis thaliana]
Length = 377
Score = 62.0 bits (149), Expect(2) = 1e-09
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 28 SGSGFSPSRGC-IHGYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
S SG++P + GYYAL +EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 227 SFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKF 271
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 165 VCKFHHPKER 194
VCKFHHP++R
Sbjct: 274 VCKFHHPRDR 283
>tpg|DAA56151.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 430
Score = 53.9 bits (128), Expect(3) = 1e-09
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 73 YALQKENGFP*RPGQPEWQYYMKTGDCKF 159
YALQ+EN FP RP +PE QYYMKTGDCKF
Sbjct: 305 YALQRENVFPERPDEPECQYYMKTGDCKF 333
Score = 27.7 bits (60), Expect(3) = 1e-09
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SSYTPLILPQGVVSVLQGDAYMG 70
S+Y P+I+PQG+V + ++Y G
Sbjct: 243 SNYAPMIVPQGLVQMQSWNSYTG 265
Score = 25.8 bits (55), Expect(3) = 1e-09
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VCKFHHP+ R L C
Sbjct: 336 VCKFHHPRVRSLPPPDC 352
>gb|ACF80171.1| unknown [Zea mays] gi|414879022|tpg|DAA56153.1| TPA: hypothetical
protein ZEAMMB73_608000 [Zea mays]
Length = 320
Score = 53.9 bits (128), Expect(3) = 1e-09
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 73 YALQKENGFP*RPGQPEWQYYMKTGDCKF 159
YALQ+EN FP RP +PE QYYMKTGDCKF
Sbjct: 195 YALQRENVFPERPDEPECQYYMKTGDCKF 223
Score = 27.7 bits (60), Expect(3) = 1e-09
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SSYTPLILPQGVVSVLQGDAYMG 70
S+Y P+I+PQG+V + ++Y G
Sbjct: 133 SNYAPMIVPQGLVQMQSWNSYTG 155
Score = 25.8 bits (55), Expect(3) = 1e-09
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VCKFHHP+ R L C
Sbjct: 226 VCKFHHPRVRSLPPPDC 242
>gb|EMJ06401.1| hypothetical protein PRUPE_ppa005813mg [Prunus persica]
Length = 442
Score = 59.7 bits (143), Expect(2) = 1e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 67 GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
G+YALQ+EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 289 GFYALQRENVFPERPGQPECQFYMKTGDCKF 319
Score = 28.1 bits (61), Expect(2) = 1e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + + C
Sbjct: 322 VCRFHHPRERLIPAPDC 338
>ref|XP_006296584.1| hypothetical protein CARUB_v100138730mg, partial [Capsella rubella]
gi|482565293|gb|EOA29482.1| hypothetical protein
CARUB_v100138730mg, partial [Capsella rubella]
Length = 329
Score = 61.6 bits (148), Expect(2) = 1e-09
Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 28 SGSGFSPSRGC-IHGYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
S SGF+P + G+YAL +EN FP RPGQPE Q+YMKTGDCKF
Sbjct: 176 SFSGFNPGSSVPLGGFYALPRENVFPERPGQPECQFYMKTGDCKF 220
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 165 VCKFHHPKER 194
VCKFHHP++R
Sbjct: 223 VCKFHHPRDR 232
>ref|NP_001132883.1| uncharacterized protein LOC100194377 [Zea mays]
gi|194695656|gb|ACF81912.1| unknown [Zea mays]
Length = 430
Score = 53.9 bits (128), Expect(3) = 2e-09
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1
Query: 73 YALQKENGFP*RPGQPEWQYYMKTGDCKF 159
YALQ+EN FP RP +PE QYYMKTGDCKF
Sbjct: 305 YALQRENVFPERPDEPECQYYMKTGDCKF 333
Score = 27.3 bits (59), Expect(3) = 2e-09
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 2 SSYTPLILPQGVVSVLQGDAYMG 70
S+Y P+I+PQG+V + ++Y G
Sbjct: 243 SNYAPMIVPQGLVQMPSWNSYTG 265
Score = 25.8 bits (55), Expect(3) = 2e-09
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VCKFHHP+ R L C
Sbjct: 336 VCKFHHPRVRSLPPPDC 352
>ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223548588|gb|EEF50079.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 448
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 67 GYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
G+YALQ++N FP RPGQPE Q+YMKTGDCKF
Sbjct: 295 GFYALQRDNVFPERPGQPECQFYMKTGDCKF 325
Score = 28.1 bits (61), Expect(2) = 3e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + + C
Sbjct: 328 VCRFHHPRERLIPAPDC 344
>ref|XP_002328972.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 58.5 bits (140), Expect(2) = 3e-09
Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Frame = +1
Query: 10 HTFDFTSGSG--FSPSRG--CIHGYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
H+ +GS FSP R G+YALQ+E+ FP RPGQPE Q+YMKTGDCKF
Sbjct: 249 HSESVNAGSQGTFSPYRSGSAPLGFYALQRESVFPERPGQPECQFYMKTGDCKF 302
Score = 28.1 bits (61), Expect(2) = 3e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + + C
Sbjct: 305 VCRFHHPRERLIPAPDC 321
>ref|XP_002325901.2| zinc finger family protein [Populus trichocarpa]
gi|550316992|gb|EEF00283.2| zinc finger family protein
[Populus trichocarpa]
Length = 445
Score = 58.2 bits (139), Expect(2) = 4e-09
Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Frame = +1
Query: 40 FSPSRG--CIHGYYALQKENGFP*RPGQPEWQYYMKTGDCKF 159
FSP R G+YALQ+E+ FP RPGQPE Q+YMKTGDCKF
Sbjct: 281 FSPYRSDSVPMGFYALQRESVFPERPGQPECQFYMKTGDCKF 322
Score = 28.1 bits (61), Expect(2) = 4e-09
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 165 VCKFHHPKERFLQSIMC 215
VC+FHHP+ER + + C
Sbjct: 325 VCRFHHPRERLIPAPDC 341