BLASTX nr result
ID: Rheum21_contig00012915
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012915
(785 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB37039.1| DNA mismatch repair protein Msh6-2 [Morus notabilis] 69 1e-09
ref|XP_006381708.1| hypothetical protein POPTR_0006s16200g [Popu... 69 1e-09
ref|XP_004242928.1| PREDICTED: DNA mismatch repair protein MSH7 ... 69 1e-09
ref|XP_002331157.1| predicted protein [Populus trichocarpa] 69 1e-09
ref|XP_004512965.1| PREDICTED: DNA mismatch repair protein MSH7-... 68 4e-09
gb|EMJ04417.1| hypothetical protein PRUPE_ppa000647mg [Prunus pe... 67 5e-09
emb|CBI28088.3| unnamed protein product [Vitis vinifera] 67 5e-09
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-... 67 5e-09
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative... 67 5e-09
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera] 67 5e-09
ref|XP_006341264.1| PREDICTED: DNA mismatch repair protein MSH7-... 67 7e-09
gb|ADG85113.1| mismatch repair protein [Solanum lycopersicum] 67 7e-09
ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago... 66 1e-08
gb|ESW24809.1| hypothetical protein PHAVU_004G162000g [Phaseolus... 66 2e-08
ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 66 2e-08
ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-... 66 2e-08
ref|XP_006475707.1| PREDICTED: DNA mismatch repair protein MSH7-... 65 2e-08
ref|XP_006451109.1| hypothetical protein CICLE_v10007291mg [Citr... 65 2e-08
ref|XP_004288695.1| PREDICTED: DNA mismatch repair protein MSH7-... 65 2e-08
ref|XP_006587514.1| PREDICTED: DNA mismatch repair protein MSH7-... 64 5e-08
>gb|EXB37039.1| DNA mismatch repair protein Msh6-2 [Morus notabilis]
Length = 1112
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Frame = +1
Query: 559 ENG-APVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
+NG PVPND+ LG G D + PHT+LLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 830 DNGRVPVPNDVVLGEGTDDYHPHTMLLTGPNMGGKSTLLRSTCLTVILAQL 880
>ref|XP_006381708.1| hypothetical protein POPTR_0006s16200g [Populus trichocarpa]
gi|550336459|gb|ERP59505.1| hypothetical protein
POPTR_0006s16200g [Populus trichocarpa]
Length = 973
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +1
Query: 559 ENGAPVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
ENG PVPND+ LG D P T+LLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 820 ENGLPVPNDVFLGEDSDSQHPRTVLLTGPNMGGKSTLLRATCLAVILAQL 869
>ref|XP_004242928.1| PREDICTED: DNA mismatch repair protein MSH7 [Solanum lycopersicum]
Length = 1082
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/48 (72%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLGGKDK-HTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPNDL LGG P TLLLTGPNMGGKSTLLR +CL VIMAQ+
Sbjct: 800 GLPVPNDLHLGGNTNIRYPRTLLLTGPNMGGKSTLLRASCLAVIMAQL 847
>ref|XP_002331157.1| predicted protein [Populus trichocarpa]
Length = 1107
Score = 69.3 bits (168), Expect = 1e-09
Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +1
Query: 559 ENGAPVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
ENG PVPND+ LG D P T+LLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 822 ENGLPVPNDVFLGEDSDSQHPRTVLLTGPNMGGKSTLLRATCLAVILAQL 871
>ref|XP_004512965.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cicer arietinum]
Length = 1098
Score = 67.8 bits (164), Expect = 4e-09
Identities = 33/46 (71%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +1
Query: 571 PVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
PVPND+ LG +D H P TLLLTGPNMGGKSTLLR C+ VIMAQ+
Sbjct: 821 PVPNDMILGENEDGHHPRTLLLTGPNMGGKSTLLRATCVAVIMAQL 866
>gb|EMJ04417.1| hypothetical protein PRUPE_ppa000647mg [Prunus persica]
Length = 1053
Score = 67.4 bits (163), Expect = 5e-09
Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPND+ LG +D + P TLLLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 776 GLPVPNDIVLGEDRDGYHPRTLLLTGPNMGGKSTLLRATCLAVILAQL 823
>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
Length = 1126
Score = 67.4 bits (163), Expect = 5e-09
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Frame = +1
Query: 553 IMENGA-PVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQVLEHV 717
I ENG PVPND+ LG D + P TLLLTGPNMGGKSTLLR CL VI+AQ+ +V
Sbjct: 832 IGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYV 888
>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
Length = 1122
Score = 67.4 bits (163), Expect = 5e-09
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Frame = +1
Query: 553 IMENGA-PVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQVLEHV 717
I ENG PVPND+ LG D + P TLLLTGPNMGGKSTLLR CL VI+AQ+ +V
Sbjct: 828 IGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYV 884
>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
MSH6-2, putative [Ricinus communis]
Length = 1089
Score = 67.4 bits (163), Expect = 5e-09
Identities = 34/48 (70%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLGGK-DKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPNDL LG D + P TLLLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 811 GMPVPNDLHLGEDLDGYLPRTLLLTGPNMGGKSTLLRATCLAVILAQL 858
>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
Length = 1090
Score = 67.4 bits (163), Expect = 5e-09
Identities = 37/57 (64%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Frame = +1
Query: 553 IMENGA-PVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQVLEHV 717
I ENG PVPND+ LG D + P TLLLTGPNMGGKSTLLR CL VI+AQ+ +V
Sbjct: 796 IGENGGLPVPNDIHLGEDTDGNHPRTLLLTGPNMGGKSTLLRATCLAVILAQLGSYV 852
>ref|XP_006341264.1| PREDICTED: DNA mismatch repair protein MSH7-like [Solanum
tuberosum]
Length = 1078
Score = 67.0 bits (162), Expect = 7e-09
Identities = 34/48 (70%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLGGKDK-HTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPN+L LGG P TLLLTGPNMGGKSTLLR CL VIMAQ+
Sbjct: 798 GLPVPNNLHLGGNTNIRYPRTLLLTGPNMGGKSTLLRATCLAVIMAQL 845
>gb|ADG85113.1| mismatch repair protein [Solanum lycopersicum]
Length = 782
Score = 67.0 bits (162), Expect = 7e-09
Identities = 34/48 (70%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLGGKDK-HTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPNDL L G P TLLLTGPNMGGKSTLLR +CL VIMAQ+
Sbjct: 508 GLPVPNDLHLAGNTNIRYPRTLLLTGPNMGGKSTLLRASCLAVIMAQL 555
>ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
gi|355495528|gb|AES76731.1| DNA mismatch repair protein
Msh6-2 [Medicago truncatula]
Length = 1160
Score = 66.2 bits (160), Expect = 1e-08
Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +1
Query: 571 PVPNDLSLGGKDK-HTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
PVPND+ LG + H P TLLLTGPNMGGKSTLLR CL VIMAQ+
Sbjct: 883 PVPNDMILGENEGGHHPRTLLLTGPNMGGKSTLLRATCLAVIMAQL 928
>gb|ESW24809.1| hypothetical protein PHAVU_004G162000g [Phaseolus vulgaris]
Length = 1077
Score = 65.9 bits (159), Expect = 2e-08
Identities = 33/46 (71%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Frame = +1
Query: 571 PVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
PVPND++LG +D P TLLLTGPNMGGKSTLLR CL VIMAQ+
Sbjct: 799 PVPNDMALGESEDGSHPRTLLLTGPNMGGKSTLLRSTCLAVIMAQL 844
>ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
MSH7-like [Cucumis sativus]
Length = 1095
Score = 65.9 bits (159), Expect = 2e-08
Identities = 33/53 (62%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = +1
Query: 553 IMENG-APVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
++E+G PVPND+ LG +D + P TLLLTGPNMGGKSTLLR CL V++AQ+
Sbjct: 819 LVESGETPVPNDMILGLDQDSYHPRTLLLTGPNMGGKSTLLRSTCLAVVLAQL 871
>ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cucumis sativus]
Length = 1095
Score = 65.9 bits (159), Expect = 2e-08
Identities = 33/53 (62%), Positives = 42/53 (79%), Gaps = 2/53 (3%)
Frame = +1
Query: 553 IMENG-APVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
++E+G PVPND+ LG +D + P TLLLTGPNMGGKSTLLR CL V++AQ+
Sbjct: 819 LVESGETPVPNDMILGLDQDSYHPRTLLLTGPNMGGKSTLLRSTCLAVVLAQL 871
>ref|XP_006475707.1| PREDICTED: DNA mismatch repair protein MSH7-like [Citrus sinensis]
Length = 1105
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPND+ LG D P TLLLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 827 GLPVPNDILLGEDSDDCLPRTLLLTGPNMGGKSTLLRATCLAVILAQL 874
>ref|XP_006451109.1| hypothetical protein CICLE_v10007291mg [Citrus clementina]
gi|557554335|gb|ESR64349.1| hypothetical protein
CICLE_v10007291mg [Citrus clementina]
Length = 1105
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPND+ LG D P TLLLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 827 GLPVPNDILLGEDSDDCLPRTLLLTGPNMGGKSTLLRATCLAVILAQL 874
>ref|XP_004288695.1| PREDICTED: DNA mismatch repair protein MSH7-like [Fragaria vesca
subsp. vesca]
Length = 1072
Score = 65.5 bits (158), Expect = 2e-08
Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +1
Query: 565 GAPVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
G PVPND+ LG D + P TLLLTGPNMGGKSTLLR CL VI+AQ+
Sbjct: 795 GLPVPNDVVLGENTDGYHPRTLLLTGPNMGGKSTLLRSTCLAVILAQL 842
>ref|XP_006587514.1| PREDICTED: DNA mismatch repair protein MSH7-like [Glycine max]
Length = 1079
Score = 64.3 bits (155), Expect = 5e-08
Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +1
Query: 571 PVPNDLSLG-GKDKHTPHTLLLTGPNMGGKSTLLRVACLVVIMAQV 705
PVPND+ LG +D P TLLLTGPNMGGKSTLLR CL VIMAQ+
Sbjct: 802 PVPNDVILGENEDGSHPRTLLLTGPNMGGKSTLLRSTCLAVIMAQL 847