BLASTX nr result

ID: Rheum21_contig00012872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012872
         (481 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY04211.1| Rad23 UV excision repair protein family isoform 2...   132   5e-29
gb|EOY04210.1| Rad23 UV excision repair protein family isoform 1...   132   5e-29
gb|ABD96879.1| hypothetical protein [Cleome spinosa]                  132   5e-29
ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23...   132   6e-29
ref|XP_004233495.1| PREDICTED: putative DNA repair protein RAD23...   132   6e-29
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   131   8e-29
ref|XP_006484457.1| PREDICTED: ubiquitin receptor RAD23c-like [C...   130   2e-28
ref|XP_006437675.1| hypothetical protein CICLE_v10031777mg [Citr...   130   2e-28
ref|XP_006437674.1| hypothetical protein CICLE_v10031777mg [Citr...   130   2e-28
ref|XP_006437673.1| hypothetical protein CICLE_v10031777mg [Citr...   130   2e-28
ref|XP_006437672.1| hypothetical protein CICLE_v10031777mg [Citr...   130   2e-28
gb|EMJ28918.1| hypothetical protein PRUPE_ppa007047mg [Prunus pe...   130   2e-28
ref|XP_004172134.1| PREDICTED: putative DNA repair protein RAD23...   130   2e-28
ref|XP_004135098.1| PREDICTED: putative DNA repair protein RAD23...   130   2e-28
ref|XP_006367045.1| PREDICTED: ubiquitin receptor RAD23c-like [S...   129   3e-28
ref|XP_006383465.1| hypothetical protein POPTR_0005s15740g [Popu...   129   3e-28
ref|XP_004236965.1| PREDICTED: putative DNA repair protein RAD23...   129   3e-28
ref|XP_002305813.1| ubiquitin family protein [Populus trichocarp...   129   3e-28
gb|ABD96960.1| hypothetical protein [Cleome spinosa]                  129   4e-28
ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23...   129   4e-28

>gb|EOY04211.1| Rad23 UV excision repair protein family isoform 2 [Theobroma cacao]
          Length = 350

 Score =  132 bits (332), Expect = 5e-29
 Identities = 64/74 (86%), Positives = 72/74 (97%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+FEIEVKPEDTVADVKK I+TAQG D+YP+AQQMLI+QGKVLKDNTTL+
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKNIDTAQGPDIYPAAQQMLIHQGKVLKDNTTLD 60

Query: 190 ENKVAENSFIVIML 149
           +NKVAENSFIVIML
Sbjct: 61  DNKVAENSFIVIML 74


>gb|EOY04210.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
          Length = 487

 Score =  132 bits (332), Expect = 5e-29
 Identities = 64/74 (86%), Positives = 72/74 (97%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+FEIEVKPEDTVADVKK I+TAQG D+YP+AQQMLI+QGKVLKDNTTL+
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKNIDTAQGPDIYPAAQQMLIHQGKVLKDNTTLD 60

Query: 190 ENKVAENSFIVIML 149
           +NKVAENSFIVIML
Sbjct: 61  DNKVAENSFIVIML 74


>gb|ABD96879.1| hypothetical protein [Cleome spinosa]
          Length = 383

 Score =  132 bits (332), Expect = 5e-29
 Identities = 74/122 (60%), Positives = 84/122 (68%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+FEIEVKPEDTVADVKK IET QG+DVYPSAQQMLI+QGKVL+D TT+E
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKNIETVQGADVYPSAQQMLIHQGKVLRDETTME 60

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQPPSAAEQVRS 11
           ENKVAE SFIVIML                        T + AP T AP  P A+ Q  +
Sbjct: 61  ENKVAEKSFIVIML-----------SKSSKPASSSGASTASAAPTTQAPPAPLASTQPST 109

Query: 10  AP 5
           +P
Sbjct: 110 SP 111


>ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 2
           [Solanum lycopersicum]
          Length = 365

 Score =  132 bits (331), Expect = 6e-29
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+FEIEVKPEDTVADVKK+IET QG DVYP+AQQMLI+QGKVLKD TTLE
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKSIETVQGQDVYPAAQQMLIHQGKVLKDPTTLE 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAENSF+VIML
Sbjct: 61  ENKVAENSFVVIML 74


>ref|XP_004233495.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 1
           [Solanum lycopersicum]
          Length = 383

 Score =  132 bits (331), Expect = 6e-29
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+FEIEVKPEDTVADVKK+IET QG DVYP+AQQMLI+QGKVLKD TTLE
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKSIETVQGQDVYPAAQQMLIHQGKVLKDPTTLE 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAENSF+VIML
Sbjct: 61  ENKVAENSFVVIML 74


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223531394|gb|EEF33228.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 409

 Score =  131 bits (330), Expect = 8e-29
 Identities = 61/74 (82%), Positives = 71/74 (95%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT F++EVKPEDT+ADVKK+IET QG+DVYP+ QQMLIYQGKVLKDNTT++
Sbjct: 1   MKIFVKTLKGTTFDVEVKPEDTIADVKKSIETTQGADVYPAGQQMLIYQGKVLKDNTTID 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAENSF+VIML
Sbjct: 61  ENKVAENSFVVIML 74


>ref|XP_006484457.1| PREDICTED: ubiquitin receptor RAD23c-like [Citrus sinensis]
          Length = 390

 Score =  130 bits (327), Expect = 2e-28
 Identities = 72/120 (60%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+F++EVKPEDTV DVK  IET QGSDVYP+AQQMLIYQGKVLKD+TTLE
Sbjct: 2   MKIFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVYPAAQQMLIYQGKVLKDDTTLE 61

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQP---PSAAEQ 20
           ENKVAENSF+VIML                           KAP+++AP P   P+ A Q
Sbjct: 62  ENKVAENSFVVIMLTKNKRPTGEGSTTSTAP---------TKAPQSSAPTPAVTPATAPQ 112


>ref|XP_006437675.1| hypothetical protein CICLE_v10031777mg [Citrus clementina]
           gi|557539871|gb|ESR50915.1| hypothetical protein
           CICLE_v10031777mg [Citrus clementina]
          Length = 390

 Score =  130 bits (327), Expect = 2e-28
 Identities = 72/120 (60%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+F++EVKPEDTV DVK  IET QGSDVYP+AQQMLIYQGKVLKD+TTLE
Sbjct: 2   MKIFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVYPAAQQMLIYQGKVLKDDTTLE 61

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQP---PSAAEQ 20
           ENKVAENSF+VIML                           KAP+++AP P   P+ A Q
Sbjct: 62  ENKVAENSFVVIML---------TKNKRPTGEGSTTSTATTKAPQSSAPTPAVTPATAPQ 112


>ref|XP_006437674.1| hypothetical protein CICLE_v10031777mg [Citrus clementina]
           gi|557539870|gb|ESR50914.1| hypothetical protein
           CICLE_v10031777mg [Citrus clementina]
          Length = 331

 Score =  130 bits (327), Expect = 2e-28
 Identities = 72/120 (60%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+F++EVKPEDTV DVK  IET QGSDVYP+AQQMLIYQGKVLKD+TTLE
Sbjct: 2   MKIFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVYPAAQQMLIYQGKVLKDDTTLE 61

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQP---PSAAEQ 20
           ENKVAENSF+VIML                           KAP+++AP P   P+ A Q
Sbjct: 62  ENKVAENSFVVIML---------TKNKRPTGEGSTTSTATTKAPQSSAPTPAVTPATAPQ 112


>ref|XP_006437673.1| hypothetical protein CICLE_v10031777mg [Citrus clementina]
           gi|557539869|gb|ESR50913.1| hypothetical protein
           CICLE_v10031777mg [Citrus clementina]
          Length = 300

 Score =  130 bits (327), Expect = 2e-28
 Identities = 72/120 (60%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+F++EVKPEDTV DVK  IET QGSDVYP+AQQMLIYQGKVLKD+TTLE
Sbjct: 2   MKIFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVYPAAQQMLIYQGKVLKDDTTLE 61

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQP---PSAAEQ 20
           ENKVAENSF+VIML                           KAP+++AP P   P+ A Q
Sbjct: 62  ENKVAENSFVVIML---------TKNKRPTGEGSTTSTATTKAPQSSAPTPAVTPATAPQ 112


>ref|XP_006437672.1| hypothetical protein CICLE_v10031777mg [Citrus clementina]
           gi|557539868|gb|ESR50912.1| hypothetical protein
           CICLE_v10031777mg [Citrus clementina]
          Length = 212

 Score =  130 bits (327), Expect = 2e-28
 Identities = 72/120 (60%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+F++EVKPEDTV DVK  IET QGSDVYP+AQQMLIYQGKVLKD+TTLE
Sbjct: 2   MKIFVKTLKGTSFDVEVKPEDTVFDVKMKIETVQGSDVYPAAQQMLIYQGKVLKDDTTLE 61

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQP---PSAAEQ 20
           ENKVAENSF+VIML                           KAP+++AP P   P+ A Q
Sbjct: 62  ENKVAENSFVVIML---------TKNKRPTGEGSTTSTATTKAPQSSAPTPAVTPATAPQ 112


>gb|EMJ28918.1| hypothetical protein PRUPE_ppa007047mg [Prunus persica]
          Length = 385

 Score =  130 bits (327), Expect = 2e-28
 Identities = 62/74 (83%), Positives = 73/74 (98%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+F++EVKPEDTVADVKK IET+QGSDVYP++QQMLI+QGKVLKD+TTL+
Sbjct: 1   MKIFVKTLKGTHFDVEVKPEDTVADVKKQIETSQGSDVYPASQQMLIHQGKVLKDSTTLD 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAENSF+VIML
Sbjct: 61  ENKVAENSFVVIML 74


>ref|XP_004172134.1| PREDICTED: putative DNA repair protein RAD23-3-like [Cucumis
           sativus]
          Length = 407

 Score =  130 bits (326), Expect = 2e-28
 Identities = 70/122 (57%), Positives = 83/122 (68%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKG++FEIEV+P DTVADVKK IET QG+DVYP+AQQMLI+QGKVLKD++TLE
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQPPSAAEQVRS 11
           ENKVAENSFIVIML                         + KAP++TAP P +       
Sbjct: 61  ENKVAENSFIVIML-------TKNKSSSGGTSSTTHAAPVAKAPQSTAPAPAATPVSTTE 113

Query: 10  AP 5
            P
Sbjct: 114 VP 115


>ref|XP_004135098.1| PREDICTED: putative DNA repair protein RAD23-3-like [Cucumis
           sativus]
          Length = 407

 Score =  130 bits (326), Expect = 2e-28
 Identities = 70/122 (57%), Positives = 83/122 (68%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKG++FEIEV+P DTVADVKK IET QG+DVYP+AQQMLI+QGKVLKD++TLE
Sbjct: 1   MKIFVKTLKGSHFEIEVQPADTVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDSSTLE 60

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQPPSAAEQVRS 11
           ENKVAENSFIVIML                         + KAP++TAP P +       
Sbjct: 61  ENKVAENSFIVIML-------TKNKSSSGGTSSTTHAAPVAKAPQSTAPAPAATPVSTTE 113

Query: 10  AP 5
            P
Sbjct: 114 VP 115


>ref|XP_006367045.1| PREDICTED: ubiquitin receptor RAD23c-like [Solanum tuberosum]
          Length = 398

 Score =  129 bits (325), Expect = 3e-28
 Identities = 64/74 (86%), Positives = 71/74 (95%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKG++FEIEVKPEDTVADVKK IET QGSDVYP+AQQMLI+QGKVLKD TTLE
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAE++FIVIML
Sbjct: 61  ENKVAESNFIVIML 74


>ref|XP_006383465.1| hypothetical protein POPTR_0005s15740g [Populus trichocarpa]
           gi|550339076|gb|ERP61262.1| hypothetical protein
           POPTR_0005s15740g [Populus trichocarpa]
          Length = 399

 Score =  129 bits (325), Expect = 3e-28
 Identities = 70/123 (56%), Positives = 81/123 (65%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MKVFVKTLKGTNFEIEVKPEDTV +VKK IE  QG+DVYP+AQQMLIYQGKVLKD+TTL+
Sbjct: 1   MKVFVKTLKGTNFEIEVKPEDTVVEVKKNIENVQGADVYPAAQQMLIYQGKVLKDDTTLD 60

Query: 190 ENKVAENSFIVIMLXXXXXXXXXXXXXXXXXXXXXXXXTINKAPETTAPQPPSAAEQVRS 11
           E+KVAENSFIV+ML                          +  P T    PP+ A+   S
Sbjct: 61  ESKVAENSFIVVMLSKSKVSSGGPSTATAAPPNSKVS---SGGPSTATAAPPTLAQPTSS 117

Query: 10  APA 2
            P+
Sbjct: 118 LPS 120


>ref|XP_004236965.1| PREDICTED: putative DNA repair protein RAD23-3-like [Solanum
           lycopersicum]
          Length = 409

 Score =  129 bits (325), Expect = 3e-28
 Identities = 64/74 (86%), Positives = 71/74 (95%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKG++FEIEVKPEDTVADVKK IET QGSDVYP+AQQMLI+QGKVLKD TTLE
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDTVADVKKNIETVQGSDVYPAAQQMLIHQGKVLKDGTTLE 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAE++FIVIML
Sbjct: 61  ENKVAESNFIVIML 74


>ref|XP_002305813.1| ubiquitin family protein [Populus trichocarpa]
           gi|222848777|gb|EEE86324.1| ubiquitin family protein
           [Populus trichocarpa]
          Length = 385

 Score =  129 bits (325), Expect = 3e-28
 Identities = 62/74 (83%), Positives = 71/74 (95%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MKVFVKTLKGTNFEIEVKPEDTVADVKK IE+ QG+DVYP+AQQML+YQGKVLKD+TTL+
Sbjct: 1   MKVFVKTLKGTNFEIEVKPEDTVADVKKNIESVQGADVYPAAQQMLVYQGKVLKDDTTLD 60

Query: 190 ENKVAENSFIVIML 149
           ENKV+E+SF V+ML
Sbjct: 61  ENKVSESSFFVVML 74


>gb|ABD96960.1| hypothetical protein [Cleome spinosa]
          Length = 435

 Score =  129 bits (324), Expect = 4e-28
 Identities = 64/74 (86%), Positives = 69/74 (93%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+FEIEVKPEDTVADVKK IET Q  DVYP+AQQMLI+QGKVLKD TT+E
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDTVADVKKNIETVQSPDVYPAAQQMLIHQGKVLKDETTME 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAENSFIVIML
Sbjct: 61  ENKVAENSFIVIML 74


>ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23-3-like [Solanum
           lycopersicum] gi|5640111|emb|CAB51544.1| RAD23 protein
           [Solanum lycopersicum var. cerasiforme]
          Length = 389

 Score =  129 bits (324), Expect = 4e-28
 Identities = 63/74 (85%), Positives = 70/74 (94%)
 Frame = -1

Query: 370 MKVFVKTLKGTNFEIEVKPEDTVADVKKTIETAQGSDVYPSAQQMLIYQGKVLKDNTTLE 191
           MK+FVKTLKGT+FEIEVKPED+VADVKK IE+ QG DVYP+AQQMLI+QGKVLKD TTLE
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVADVKKNIESVQGQDVYPAAQQMLIHQGKVLKDTTTLE 60

Query: 190 ENKVAENSFIVIML 149
           ENKVAENSF+VIML
Sbjct: 61  ENKVAENSFVVIML 74


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