BLASTX nr result

ID: Rheum21_contig00012634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012634
         (625 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY16453.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,...    57   4e-06
gb|EOY16452.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,...    57   4e-06
gb|EOY16451.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,...    57   4e-06
gb|EMJ23125.1| hypothetical protein PRUPE_ppa000052mg [Prunus pe...    56   7e-06

>gb|EOY16453.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 3
            [Theobroma cacao]
          Length = 1935

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
 Frame = -1

Query: 433  FVPSSGRRPTT-VVKSRTWHRIDNPTSVSNLPGQNSSTIFVPQQKQTFDQTVRTQSNSYV 257
            F  S    P+T + K RTWHR +N +S S L G   S+   P Q+Q   +    QS SY+
Sbjct: 1321 FSASKNTTPSTNITKPRTWHRTNN-SSASPLSGNKPSSSANPLQRQMPKKAAFFQSPSYI 1379

Query: 256  RKGNSLLRNPVT---------------------AVSQTLKTSVPATSVPQLNLFTSEDAT 140
            RKGNSL+R PV                       V +  K + P + V  ++L T     
Sbjct: 1380 RKGNSLVRKPVAVPALPQGSHSLSSSVYRMNPGVVDEVKKGTGPNSRVGAVDLRTGGANA 1439

Query: 139  PCEVPVN--LSSTCNIDSSNCNLAPLGDPRCSPVADSSMA 26
              E P    LSS   +   NC     G+   SP+A+ S++
Sbjct: 1440 SFERPTTPPLSSVSKV--PNCTSNSPGECTSSPLAEPSIS 1477


>gb|EOY16452.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 2
            [Theobroma cacao]
          Length = 1962

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
 Frame = -1

Query: 433  FVPSSGRRPTT-VVKSRTWHRIDNPTSVSNLPGQNSSTIFVPQQKQTFDQTVRTQSNSYV 257
            F  S    P+T + K RTWHR +N +S S L G   S+   P Q+Q   +    QS SY+
Sbjct: 1321 FSASKNTTPSTNITKPRTWHRTNN-SSASPLSGNKPSSSANPLQRQMPKKAAFFQSPSYI 1379

Query: 256  RKGNSLLRNPVT---------------------AVSQTLKTSVPATSVPQLNLFTSEDAT 140
            RKGNSL+R PV                       V +  K + P + V  ++L T     
Sbjct: 1380 RKGNSLVRKPVAVPALPQGSHSLSSSVYRMNPGVVDEVKKGTGPNSRVGAVDLRTGGANA 1439

Query: 139  PCEVPVN--LSSTCNIDSSNCNLAPLGDPRCSPVADSSMA 26
              E P    LSS   +   NC     G+   SP+A+ S++
Sbjct: 1440 SFERPTTPPLSSVSKV--PNCTSNSPGECTSSPLAEPSIS 1477


>gb|EOY16451.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform 1
            [Theobroma cacao]
          Length = 2110

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
 Frame = -1

Query: 433  FVPSSGRRPTT-VVKSRTWHRIDNPTSVSNLPGQNSSTIFVPQQKQTFDQTVRTQSNSYV 257
            F  S    P+T + K RTWHR +N +S S L G   S+   P Q+Q   +    QS SY+
Sbjct: 1321 FSASKNTTPSTNITKPRTWHRTNN-SSASPLSGNKPSSSANPLQRQMPKKAAFFQSPSYI 1379

Query: 256  RKGNSLLRNPVT---------------------AVSQTLKTSVPATSVPQLNLFTSEDAT 140
            RKGNSL+R PV                       V +  K + P + V  ++L T     
Sbjct: 1380 RKGNSLVRKPVAVPALPQGSHSLSSSVYRMNPGVVDEVKKGTGPNSRVGAVDLRTGGANA 1439

Query: 139  PCEVPVN--LSSTCNIDSSNCNLAPLGDPRCSPVADSSMA 26
              E P    LSS   +   NC     G+   SP+A+ S++
Sbjct: 1440 SFERPTTPPLSSVSKV--PNCTSNSPGECTSSPLAEPSIS 1477


>gb|EMJ23125.1| hypothetical protein PRUPE_ppa000052mg [Prunus persica]
          Length = 2092

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 33/81 (40%), Positives = 46/81 (56%)
 Frame = -1

Query: 406  TTVVKSRTWHRIDNPTSVSNLPGQNSSTIFVPQQKQTFDQTVRTQSNSYVRKGNSLLRNP 227
            T + K RTWHR  N  S S+LP     +  VP Q+    +  + QSNSYVRKGNSL+R P
Sbjct: 1311 THMAKPRTWHRNGN-ASASSLPASMPFSSTVPPQRNLPQKDGKLQSNSYVRKGNSLVRKP 1369

Query: 226  VTAVSQTLKTSVPATSVPQLN 164
            V   +    +   +++V +LN
Sbjct: 1370 VPVAALPQSSHGFSSAVYRLN 1390


Top