BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012625
         (601 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe...    71   2e-10
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...    70   4e-10
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein...    69   7e-10
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...    69   7e-10
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...    69   1e-09
ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein...    69   1e-09
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...    69   1e-09
ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein...    68   2e-09
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...    68   2e-09
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...    68   2e-09
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...    68   2e-09
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...    68   2e-09
ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein...    67   3e-09
gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryz...    67   3e-09
ref|XP_003521660.1| PREDICTED: RNA polymerase-associated protein...    67   3e-09
ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [S...    67   3e-09
ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea ma...    67   3e-09
ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293...    67   3e-09
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi...    67   3e-09
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo...    67   3e-09

>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GFLA+KQ+IEA +G +V ENDGRRHALTL+VSDYKRRMGLL
Sbjct: 606 GFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
           X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform X2 [Glycine max]
          Length = 656

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQKIEA +G +V+ENDGRRHALTL+VSDYKRR GLL
Sbjct: 616 GFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
           vesca subsp. vesca]
          Length = 619

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQ+IEA +GV+V E+DGRRHALTLSVSDYKRR GLL
Sbjct: 579 GFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 619


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
           vesca subsp. vesca]
          Length = 657

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQ+IEA +GV+V E+DGRRHALTLSVSDYKRR GLL
Sbjct: 617 GFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRGLL 657


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
           tuberosum]
          Length = 652

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQ+IEA +G  V ENDGRRHALTLSVSDYKRR GLL
Sbjct: 612 GFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Setaria
           italica]
          Length = 650

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A+KQKIEA +G KV +NDGRRHALTLSVSDYKRR GLL
Sbjct: 610 GYMARKQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 650


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
           [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
           PREDICTED: RNA polymerase-associated protein RTF1
           homolog isoform 2 [Solanum lycopersicum]
          Length = 645

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQ+IEA +G  V ENDGRRHALTLSVSDYKRR GLL
Sbjct: 605 GFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
           [Brachypodium distachyon]
          Length = 658

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A+KQKIEA +G K+ +NDGRRHALTLSVSDYKRR GLL
Sbjct: 618 GYMARKQKIEATMGYKIPDNDGRRHALTLSVSDYKRRRGLL 658


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus
           notabilis]
          Length = 658

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQ+IEA +G +V ENDGRRHALTLSV DYKRR GLL
Sbjct: 618 GFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
           gi|508781058|gb|EOY28314.1| PAF1 complex component
           isoform 1 [Theobroma cacao]
          Length = 660

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQ+IEA +G +V ENDGRRHALTL+VSDYKRR GLL
Sbjct: 620 GFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
           sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
           polymerase-associated protein RTF1 homolog [Cucumis
           sativus]
          Length = 660

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GFLA+KQ+IEA +G +V ENDGRRHALTL+VSDYKRR GLL
Sbjct: 620 GFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 656

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GF+A+KQ+IE+ +G +V+ENDGRRHALTL+VSDYKRR GLL
Sbjct: 616 GFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza
           brachyantha]
          Length = 645

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A+KQKIEA +G KV +NDGRRHALTL+VSDYKRR GLL
Sbjct: 605 GYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 645


>gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
           Group] gi|77556035|gb|ABA98831.1| Plus-3 domain
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|215697432|dbj|BAG91426.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 522

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A+KQKIEA +G KV +NDGRRHALTL+VSDYKRR GLL
Sbjct: 482 GYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 522


>ref|XP_003521660.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
           max]
          Length = 664

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           GFLA+KQKIEA +G++V+E DG RHALTLS+SDYKRR GLL
Sbjct: 624 GFLARKQKIEATVGLQVSEKDGSRHALTLSISDYKRRRGLL 664


>ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
           gi|241942942|gb|EES16087.1| hypothetical protein
           SORBIDRAFT_08g017010 [Sorghum bicolor]
          Length = 656

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A++QKIEA +G KV +NDGRRHALTLSVSDYKRR GLL
Sbjct: 616 GYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 656


>ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays]
           gi|223950353|gb|ACN29260.1| unknown [Zea mays]
           gi|413916604|gb|AFW56536.1| plus-3 domain-containing
           protein [Zea mays]
          Length = 650

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A++QKIEA +G KV +NDGRRHALTLSVSDYKRR GLL
Sbjct: 610 GYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 650


>ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293|gb|ACL52521.1| unknown
           [Zea mays] gi|414878213|tpg|DAA55344.1| TPA:
           hypothetical protein ZEAMMB73_654453 [Zea mays]
          Length = 647

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A++QKIEA +G KV +NDGRRHALTLSVSDYKRR GLL
Sbjct: 607 GYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL 647


>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
          Length = 780

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A+KQKIEA +G KV +NDGRRHALTL+VSDYKRR GLL
Sbjct: 740 GYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 780


>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
          Length = 653

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = -3

Query: 599 GFLAKKQKIEAEIGVKVAENDGRRHALTLSVSDYKRRMGLL 477
           G++A+KQKIEA +G KV +NDGRRHALTL+VSDYKRR GLL
Sbjct: 613 GYMARKQKIEATMGYKVPDNDGRRHALTLTVSDYKRRRGLL 653