BLASTX nr result
ID: Rheum21_contig00012251
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012251
(370 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ06479.1| hypothetical protein PRUPE_ppa006524mg [Prunus pe... 62 1e-07
gb|EXB84816.1| 60S ribosomal protein L4 [Morus notabilis] 61 1e-07
ref|XP_004981434.1| PREDICTED: 60S ribosomal protein L4-1-like [... 61 1e-07
ref|NP_001147047.1| 60S ribosomal protein L4 [Zea mays] gi|19560... 61 1e-07
gb|ACF86133.1| unknown [Zea mays] gi|414591976|tpg|DAA42547.1| T... 61 1e-07
ref|NP_001130220.1| uncharacterized protein LOC100191314 [Zea ma... 61 1e-07
ref|NP_001130508.1| uncharacterized protein LOC100191607 [Zea ma... 61 2e-07
gb|ACF78753.1| unknown [Zea mays] gi|224031407|gb|ACN34779.1| un... 61 2e-07
ref|NP_187574.1| 60S ribosomal protein L4-1 [Arabidopsis thalian... 60 3e-07
ref|XP_006650729.1| PREDICTED: 60S ribosomal protein L4-like [Or... 60 3e-07
ref|XP_006381503.1| hypothetical protein POPTR_0006s13470g [Popu... 60 3e-07
ref|NP_001030663.1| 60S ribosomal protein L4-1 [Arabidopsis thal... 60 3e-07
ref|XP_002463741.1| hypothetical protein SORBIDRAFT_01g005210 [S... 60 3e-07
ref|XP_002336155.1| predicted protein [Populus trichocarpa] 60 3e-07
ref|XP_002322848.1| 60S ribosomal protein L1 [Populus trichocarp... 60 3e-07
dbj|BAH20258.1| AT3G09630 [Arabidopsis thaliana] 60 3e-07
gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides] 60 3e-07
ref|XP_002326163.1| predicted protein [Populus trichocarpa] gi|5... 60 3e-07
ref|NP_001173666.1| Os03g0796501 [Oryza sativa Japonica Group] g... 60 3e-07
gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arabidopsis thal... 60 3e-07
>gb|EMJ06479.1| hypothetical protein PRUPE_ppa006524mg [Prunus persica]
Length = 408
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
IKA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 377 IKAAGKAWYKTMISDSDYTEFENFTKWLGV 406
>gb|EXB84816.1| 60S ribosomal protein L4 [Morus notabilis]
Length = 408
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
IKA+GKS+Y+TMISDSDYTEFENFTKWLGV
Sbjct: 377 IKAAGKSWYQTMISDSDYTEFENFTKWLGV 406
>ref|XP_004981434.1| PREDICTED: 60S ribosomal protein L4-1-like [Setaria italica]
Length = 404
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
+KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 373 VKAAGKAWYKTMISDSDYTEFENFTKWLGV 402
>ref|NP_001147047.1| 60S ribosomal protein L4 [Zea mays] gi|195606864|gb|ACG25262.1| 60S
ribosomal protein L4 [Zea mays]
Length = 404
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
+KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 373 VKAAGKAWYKTMISDSDYTEFENFTKWLGV 402
>gb|ACF86133.1| unknown [Zea mays] gi|414591976|tpg|DAA42547.1| TPA: 60S ribosomal
protein L4 [Zea mays]
Length = 404
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
+KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 373 VKAAGKAWYKTMISDSDYTEFENFTKWLGV 402
>ref|NP_001130220.1| uncharacterized protein LOC100191314 [Zea mays]
gi|194688582|gb|ACF78375.1| unknown [Zea mays]
gi|219885387|gb|ACL53068.1| unknown [Zea mays]
gi|414873365|tpg|DAA51922.1| TPA: hypothetical protein
ZEAMMB73_952734 [Zea mays]
Length = 404
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
+KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 373 VKAAGKAWYKTMISDSDYTEFENFTKWLGV 402
>ref|NP_001130508.1| uncharacterized protein LOC100191607 [Zea mays]
gi|195619738|gb|ACG31699.1| 60S ribosomal protein L4
[Zea mays]
Length = 404
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
+KA+GK++YKTM+SDSDYTEFENFTKWLGV
Sbjct: 373 VKAAGKAWYKTMVSDSDYTEFENFTKWLGV 402
>gb|ACF78753.1| unknown [Zea mays] gi|224031407|gb|ACN34779.1| unknown [Zea mays]
gi|413932810|gb|AFW67361.1| 60S ribosomal protein L4
[Zea mays]
Length = 404
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
+KA+GK++YKTM+SDSDYTEFENFTKWLGV
Sbjct: 373 VKAAGKAWYKTMVSDSDYTEFENFTKWLGV 402
>ref|NP_187574.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
gi|17369604|sp|Q9SF40.1|RL4A_ARATH RecName: Full=60S
ribosomal protein L4-1; Short=L1
gi|6682241|gb|AAF23293.1|AC016661_18 putative 60S
ribosomal protein L1 [Arabidopsis thaliana]
gi|15982715|gb|AAL09727.1| AT3g09630/F11F8_22
[Arabidopsis thaliana] gi|27311665|gb|AAO00798.1|
putative 60S ribosomal protein L1 [Arabidopsis thaliana]
gi|30725664|gb|AAP37854.1| At3g09630 [Arabidopsis
thaliana] gi|332641268|gb|AEE74789.1| 60S ribosomal
protein L4-1 [Arabidopsis thaliana]
Length = 406
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLG 284
IKA+GKS+YKTMISDSDYTEF+NFTKWLG
Sbjct: 375 IKAAGKSWYKTMISDSDYTEFDNFTKWLG 403
>ref|XP_006650729.1| PREDICTED: 60S ribosomal protein L4-like [Oryza brachyantha]
Length = 403
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
IKA+GK++YKTMISDSDYTEFENF+KWLGV
Sbjct: 372 IKAAGKAWYKTMISDSDYTEFENFSKWLGV 401
>ref|XP_006381503.1| hypothetical protein POPTR_0006s13470g [Populus trichocarpa]
gi|550336207|gb|ERP59300.1| hypothetical protein
POPTR_0006s13470g [Populus trichocarpa]
Length = 374
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 367 KASGKSFYKTMISDSDYTEFENFTKWLGV 281
KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 344 KAAGKAWYKTMISDSDYTEFENFTKWLGV 372
>ref|NP_001030663.1| 60S ribosomal protein L4-1 [Arabidopsis thaliana]
gi|332641269|gb|AEE74790.1| 60S ribosomal protein L4-1
[Arabidopsis thaliana]
Length = 405
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLG 284
IKA+GKS+YKTMISDSDYTEF+NFTKWLG
Sbjct: 374 IKAAGKSWYKTMISDSDYTEFDNFTKWLG 402
>ref|XP_002463741.1| hypothetical protein SORBIDRAFT_01g005210 [Sorghum bicolor]
gi|241917595|gb|EER90739.1| hypothetical protein
SORBIDRAFT_01g005210 [Sorghum bicolor]
Length = 404
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
+KA+GK++YKTMISDSDYTE+ENFTKWLGV
Sbjct: 373 VKAAGKAWYKTMISDSDYTEYENFTKWLGV 402
>ref|XP_002336155.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 367 KASGKSFYKTMISDSDYTEFENFTKWLGV 281
KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 378 KAAGKAWYKTMISDSDYTEFENFTKWLGV 406
>ref|XP_002322848.1| 60S ribosomal protein L1 [Populus trichocarpa]
gi|222867478|gb|EEF04609.1| 60S ribosomal protein L1
[Populus trichocarpa]
Length = 407
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 367 KASGKSFYKTMISDSDYTEFENFTKWLGV 281
KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 377 KAAGKAWYKTMISDSDYTEFENFTKWLGV 405
>dbj|BAH20258.1| AT3G09630 [Arabidopsis thaliana]
Length = 173
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLG 284
IKA+GKS+YKTMISDSDYTEF+NFTKWLG
Sbjct: 142 IKAAGKSWYKTMISDSDYTEFDNFTKWLG 170
>gb|ABK96375.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 407
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 367 KASGKSFYKTMISDSDYTEFENFTKWLGV 281
KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 377 KAAGKAWYKTMISDSDYTEFENFTKWLGV 405
>ref|XP_002326163.1| predicted protein [Populus trichocarpa]
gi|566176151|ref|XP_006381505.1| hypothetical protein
POPTR_0006s13480g [Populus trichocarpa]
gi|118486971|gb|ABK95318.1| unknown [Populus
trichocarpa] gi|550336209|gb|ERP59302.1| hypothetical
protein POPTR_0006s13480g [Populus trichocarpa]
Length = 408
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 367 KASGKSFYKTMISDSDYTEFENFTKWLGV 281
KA+GK++YKTMISDSDYTEFENFTKWLGV
Sbjct: 378 KAAGKAWYKTMISDSDYTEFENFTKWLGV 406
>ref|NP_001173666.1| Os03g0796501 [Oryza sativa Japonica Group]
gi|31126753|gb|AAP44673.1| putative 60S ribosomal
protein L1 [Oryza sativa Japonica Group]
gi|50400025|gb|AAT76413.1| putative 60S ribosomal
protein L1 [Oryza sativa Japonica Group]
gi|222625961|gb|EEE60093.1| hypothetical protein
OsJ_12950 [Oryza sativa Japonica Group]
gi|255674964|dbj|BAH92394.1| Os03g0796501 [Oryza sativa
Japonica Group]
Length = 404
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLGV 281
IKA+GK++YKTMISDSDYTEFENF+KWLGV
Sbjct: 373 IKAAGKAWYKTMISDSDYTEFENFSKWLGV 402
>gb|AAM65510.1| 60S ribosomal protein L4-B (L1) [Arabidopsis thaliana]
Length = 406
Score = 60.1 bits (144), Expect = 3e-07
Identities = 26/29 (89%), Positives = 29/29 (100%)
Frame = -1
Query: 370 IKASGKSFYKTMISDSDYTEFENFTKWLG 284
IKA+GKS+YKTMISDSDYTEF+NFTKWLG
Sbjct: 375 IKAAGKSWYKTMISDSDYTEFDNFTKWLG 403