BLASTX nr result

ID: Rheum21_contig00012047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012047
         (558 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24021.3| unnamed protein product [Vitis vinifera]               76   6e-12
ref|XP_006348213.1| PREDICTED: serine/arginine repetitive matrix...    72   7e-11
ref|XP_006283341.1| hypothetical protein CARUB_v10004381mg [Caps...    70   3e-10
gb|ESW13982.1| hypothetical protein PHAVU_008G243000g [Phaseolus...    69   8e-10
ref|XP_003616102.1| hypothetical protein MTR_5g076140 [Medicago ...    67   4e-09
ref|NP_198517.2| uncharacterized protein [Arabidopsis thaliana] ...    65   1e-08

>emb|CBI24021.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 80/244 (32%), Positives = 99/244 (40%), Gaps = 60/244 (24%)
 Frame = +2

Query: 5   TKSGNLANSATSNSNGGI----RAGKMVSVPATVSIEKKKNIGDCNVKRNGVK------- 151
           T S   A  A+S++N G     R GKMVSVPATV I+K  N G   V  +G K       
Sbjct: 220 TTSAEAAEKASSHANAGCSNATRPGKMVSVPATV-IDKGNN-GSSGVAASGSKTPRSRSP 277

Query: 152 -----------------EESLSRKAEHSPYRRAPLNEIDMGSLANSVKGQHKCSEIEEVV 280
                              + SRKAE SPYRR PL+EID       +K +    EIE   
Sbjct: 278 ANARVVSNDSQNQHPSLSRNSSRKAEQSPYRRNPLSEIDPNINNRGLKAR----EIEP-D 332

Query: 281 AKQHVNVVTQDKLGVAVHGCR----SRGSEVKVI-------------------------- 370
            +Q  N+   +   V VHG      SRG   +V+                          
Sbjct: 333 CQQKPNMKDMNNGKVVVHGTNNRSSSRGKVFQVVEEAGEPKGLQPRTNSIETTIVVASGA 392

Query: 371 XXXXXXXXXXXXXXXXXXDLDINVEALLKPSPATNYNLLLLEDIQNFHQKAACVR--TLP 544
                             DLD+N E LL P+P  +Y  LLLEDIQNFHQK       +LP
Sbjct: 393 ESLKPQALTRTRSSRRSRDLDLNPETLLNPTP--SYTTLLLEDIQNFHQKNTTTPSISLP 450

Query: 545 ECLS 556
            C+S
Sbjct: 451 ACVS 454


>ref|XP_006348213.1| PREDICTED: serine/arginine repetitive matrix protein 3-like,
           partial [Solanum tuberosum]
          Length = 652

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 74/242 (30%), Positives = 95/242 (39%), Gaps = 58/242 (23%)
 Frame = +2

Query: 5   TKSGNLANSATSNSNGGIRAGKMVSVPATVS-----------------------IEKKKN 115
           T  GN+A SA +N N G R GKMVSVPATVS                       I+ K+N
Sbjct: 233 TNGGNVA-SANANGNNGGRPGKMVSVPATVSSMVMDKSIDAGGTDNISAAAVKRIQVKRN 291

Query: 116 IG--------------------------DCNVKRNGVKEESLS------RKAEHSPYRRA 199
            G                          D N   N  +++ +S      RK E SPYRR 
Sbjct: 292 AGGDGPRTAASPRARSPARVNAKVLNERDNNAHSNQNQQQPMSLSRSNSRKHEQSPYRRN 351

Query: 200 PLNEIDMGSLANSVKGQHKCSEIEEVVAKQHVNVVTQDKLGVAVHGCRSRGSEVKVIXXX 379
           PL+EID     N V  Q     ++    K +   V+  K+    H          ++   
Sbjct: 352 PLSEID----TNVVLEQMPAPGLKVPSQKLNAETVSNGKVKEQQHNVAMN----VIVSGP 403

Query: 380 XXXXXXXXXXXXXXXDLDINVEALLKPSPATNYNLLLLEDIQNFHQKAACVR---TLPEC 550
                          DLDIN EAL   +P  +Y  LLLEDIQNFHQK        +LP C
Sbjct: 404 ESHKPQRSRSLRLSRDLDINPEAL--SNPPQSYTALLLEDIQNFHQKTNTTTPAFSLPPC 461

Query: 551 LS 556
           ++
Sbjct: 462 VT 463


>ref|XP_006283341.1| hypothetical protein CARUB_v10004381mg [Capsella rubella]
           gi|482552046|gb|EOA16239.1| hypothetical protein
           CARUB_v10004381mg [Capsella rubella]
          Length = 623

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 70/232 (30%), Positives = 95/232 (40%), Gaps = 50/232 (21%)
 Frame = +2

Query: 11  SGNLANSATSNSNGGIRAGKMVSVPATVSIEKKKNIGDCNVKRNGVKEE----------- 157
           SGN  NS+ +N+    + GK VSVPAT   +   N GD +VKR  VK             
Sbjct: 234 SGNSVNSSNNNN----KPGKFVSVPATD--KALSNNGDGSVKRVAVKRNVGKAASPRSQS 287

Query: 158 -----------SLSRKAEHSPYRRAPLNEIDMGSLA---NSVKGQHKCSEIEE-----VV 280
                       LSRK E SPYRR PL EID  S+A   N  K  ++  E+ +     V 
Sbjct: 288 PARAASQPSPSKLSRKTELSPYRRNPLGEIDTNSVAGNTNCNKRMNRDIEMNKDSCNFVA 347

Query: 281 AKQHVNVVTQDKLGVAVHGCRSRGSEVKVIXXXXXXXXXXXXXXXXXX-----DLDINVE 445
            K +  + TQ  +  +    R+   + +++                       D D + +
Sbjct: 348 QKMNPKIATQAPIRRSASPIRAMKEQQEIVEECKVELVKPQIMSRSRSLRKSRDFDFSPD 407

Query: 446 ALLKPSPATN---------------YNLLLLEDIQNFHQKAACVRTLPECLS 556
           ALL  +   N               Y  LLLEDIQNFHQK+  V TL   +S
Sbjct: 408 ALLSSNIDNNNINSNNATAGSTLPSYTALLLEDIQNFHQKSVNVNTLSSSMS 459


>gb|ESW13982.1| hypothetical protein PHAVU_008G243000g [Phaseolus vulgaris]
          Length = 652

 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 71/240 (29%), Positives = 95/240 (39%), Gaps = 67/240 (27%)
 Frame = +2

Query: 38  SNSNGGIRAGKMVSVPATVS------------------IEKKKNIGDCN----------- 130
           SN+N   R GKMVSVP TVS                  I  K+N+GD             
Sbjct: 240 SNNNASSRPGKMVSVPPTVSSLAMDKSNNCGGESGTKRITVKRNVGDVGSRGAASPRTQS 299

Query: 131 -VKRNG------------------VKEESLSRKAEHSPYRRAPLNEIDMGSLANSVKGQH 253
             + NG                  +   + SRKAE SPYRR PL+E+D     NS   Q+
Sbjct: 300 PARVNGNVASARVLSENQQHQQPSLSRNNSSRKAEQSPYRRNPLSEVDN----NSKVQQN 355

Query: 254 KCSEIEEVVAKQHVNVVTQDKLGVAVHGCRSRGSEVKV---------------IXXXXXX 388
           K     E + K +  V  +   GV V+ C+++     V               +      
Sbjct: 356 KPKTEAEAMQKPNGRVALEK--GVTVN-CKTKEHHEDVSLDSAVVKTTVASSGVDNLKPQ 412

Query: 389 XXXXXXXXXXXXDLDINVEALLKPSPATNYNLLLLEDIQNFHQK----AACVRTLPECLS 556
                       DLDIN E+++  +P  +Y  LLLEDIQNFHQK         +LP CL+
Sbjct: 413 GLTRSRSSRRSRDLDINPESVVNVNPTHSYASLLLEDIQNFHQKNTPQQPSSTSLPACLT 472


>ref|XP_003616102.1| hypothetical protein MTR_5g076140 [Medicago truncatula]
            gi|355517437|gb|AES99060.1| hypothetical protein
            MTR_5g076140 [Medicago truncatula]
          Length = 651

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 80/265 (30%), Positives = 102/265 (38%), Gaps = 81/265 (30%)
 Frame = +2

Query: 5    TKSGNLANSATSNSNGG----IRAGKMVSVPATVS---IEKKKNIGD-----CNVKRNGV 148
            +++G+  N+  +NSNG      R GKMV+VPATV+   ++K  N G       NVKRN  
Sbjct: 258  SENGSNNNNNNNNSNGSGSGCTRPGKMVTVPATVTSLVMDKSNNGGGEGVKRVNVKRNVA 317

Query: 149  KEESLS---------------------------------------RKAEHSPYRRAPLNE 211
               S+S                                       RK E SPYRR PL+E
Sbjct: 318  SPRSMSPARGNVNGLNQQRSMSPARGNGNVVNQNQQPSLSRNNSARKTEVSPYRRNPLSE 377

Query: 212  IDMGSLA--------NSVKGQHKCSEIEEVVAKQHVNVVTQDKL------------GVAV 331
            +D  SLA           K Q+K  +  EV   Q   V  +D              GV  
Sbjct: 378  VDPNSLAYPQSNANNGGSKVQNKGKKEIEVETIQKPTVEMRDNTRNRTNNRVGMEKGVNC 437

Query: 332  HGCRSRGSEVKVIXXXXXXXXXXXXXXXXXX-------DLDI-NVEALLKPSPATNYNLL 487
            H    +  E+KV+                         D D  N E L  P P T+Y  L
Sbjct: 438  HTKEQQQEEIKVMSDNTIVKNVVMPSGITRSRSSRRSRDFDTANPEPLTNP-PQTSYTSL 496

Query: 488  LLEDIQNFHQKAACVR--TLPECLS 556
            LLEDIQNFHQK       +LP CL+
Sbjct: 497  LLEDIQNFHQKNTTQPSVSLPACLN 521


>ref|NP_198517.2| uncharacterized protein [Arabidopsis thaliana]
           gi|9758524|dbj|BAB08971.1| unnamed protein product
           [Arabidopsis thaliana] gi|26449396|dbj|BAC41825.1|
           putative serine-rich protein [Arabidopsis thaliana]
           gi|29028998|gb|AAO64878.1| At5g37010 [Arabidopsis
           thaliana] gi|332006753|gb|AED94136.1| uncharacterized
           protein AT5G37010 [Arabidopsis thaliana]
          Length = 637

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 77/259 (29%), Positives = 99/259 (38%), Gaps = 77/259 (29%)
 Frame = +2

Query: 11  SGNLANSATSNSNGGIRAGKMVSVPATVSIEKKKNIGDCNVKRNGVKEE----------- 157
           SGN  NS+ +N     R GK VSVPAT       N GD +VKR  VK             
Sbjct: 229 SGNSVNSSNNN-----RPGKFVSVPATDKALSNNN-GDGSVKRITVKRNVGKAASPRSQS 282

Query: 158 -----------SLSRKAEHSPYRRAPLNEIDMGSLA------------NSVKGQHKCSEI 268
                       LSRK EHSPYRR PL+EID  S+A            N+++  ++ +E 
Sbjct: 283 PARAASQPSPSKLSRKTEHSPYRRNPLSEIDPNSVAFPLSQGDKLGSGNNIRMMNRDNEN 342

Query: 269 EEVVAK------QHVNVVTQDKLGV-------------------AVHGCR---SRGSEVK 364
           + +V +      Q +N V   K                      AV  C+   S G+E+ 
Sbjct: 343 QGLVKESGTFVAQKLNPVMNTKTVTQAPIRRTASPSRAIKEQQEAVEECKIVVSSGTEL- 401

Query: 365 VIXXXXXXXXXXXXXXXXXXDLDINVEALLK---------------PSPATNYNLLLLED 499
                               D D + EALL                 S   +Y  LLLED
Sbjct: 402 ----AKPQIVSRSRSLRKSRDFDFSPEALLSNNIDINNVNSNNATAGSTFPSYTALLLED 457

Query: 500 IQNFHQKAACVRTLPECLS 556
           IQNFHQK+  V  L   +S
Sbjct: 458 IQNFHQKSVNVSALSSSMS 476


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