BLASTX nr result
ID: Rheum21_contig00011633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00011633
(708 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei... 151 2e-34
gb|AFK40678.1| unknown [Lotus japonicus] 148 1e-33
ref|XP_002318331.1| RNA recognition motif-containing family prot... 145 9e-33
ref|XP_004301228.1| PREDICTED: cold-inducible RNA-binding protei... 144 2e-32
ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin... 144 2e-32
gb|ESW24590.1| hypothetical protein PHAVU_004G143300g [Phaseolus... 144 4e-32
ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein ... 143 5e-32
ref|XP_006478116.1| PREDICTED: glycine-rich RNA-binding protein ... 142 1e-31
ref|XP_006441346.1| hypothetical protein CICLE_v10022555mg [Citr... 141 2e-31
gb|EMJ11299.1| hypothetical protein PRUPE_ppa019414mg, partial [... 141 2e-31
ref|XP_006340998.1| PREDICTED: cold-inducible RNA-binding protei... 139 9e-31
ref|XP_004246450.1| PREDICTED: RNA-binding motif protein, X chro... 137 3e-30
ref|XP_006855610.1| hypothetical protein AMTR_s00044p00073410 [A... 137 3e-30
ref|XP_006390546.1| hypothetical protein EUTSA_v10019191mg [Eutr... 134 3e-29
gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japo... 133 5e-29
gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indi... 133 5e-29
ref|XP_002888931.1| RNA recognition motif-containing protein [Ar... 132 8e-29
ref|NP_177494.1| RNA recognition motif-containing protein [Arabi... 130 3e-28
ref|XP_006301161.1| hypothetical protein CARUB_v10021559mg, part... 129 9e-28
ref|XP_006302887.1| hypothetical protein CARUB_v10021018mg [Caps... 128 2e-27
>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product
[Vitis vinifera]
Length = 170
Score = 151 bits (381), Expect = 2e-34
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
RLYVSGLSFRTTEESLRNAFE FGQL EVNLVMDKIANRPRGFAFLRY+TEEE+ KAI+G
Sbjct: 80 RLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEG 139
Query: 206 MHGKFLHGRVIFVEVAKPRSQLR 138
MHGKFL GRVIFVEVAKPRS+LR
Sbjct: 140 MHGKFLDGRVIFVEVAKPRSELR 162
>gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 148 bits (374), Expect = 1e-33
Identities = 73/88 (82%), Positives = 81/88 (92%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
RLYVSGLSFRTTEESLRN F+ FGQL +VNLVMDK+ANRPRGFAFLRYATEEE++KAI+G
Sbjct: 95 RLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEG 154
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNTTQK 123
MHGKFL GRVIFVEVAKPRS+LR Q+
Sbjct: 155 MHGKFLDGRVIFVEVAKPRSELRQRFQQ 182
>ref|XP_002318331.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222859004|gb|EEE96551.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 181
Score = 145 bits (367), Expect = 9e-33
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTEESLRNAF+ FGQL +VNLVMDK+A RPRGFAFLRY TEEEA+KAI+G
Sbjct: 91 KLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEG 150
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNT 132
MHGKFL GRVIFVEVAKPRS+LR +
Sbjct: 151 MHGKFLDGRVIFVEVAKPRSELRQS 175
>ref|XP_004301228.1| PREDICTED: cold-inducible RNA-binding protein-like [Fragaria vesca
subsp. vesca]
Length = 166
Score = 144 bits (364), Expect = 2e-32
Identities = 74/94 (78%), Positives = 82/94 (87%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTEESLRNAF+ FG+L EVNLVMD+IANRPRGFAFLRY TEEE++KAI G
Sbjct: 74 KLYVSGLSFRTTEESLRNAFQNFGRLVEVNLVMDRIANRPRGFAFLRYETEEESQKAIKG 133
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNTTQKP*SSPR 105
MHGKFL GRVIFVE AKPRS+LR T P +PR
Sbjct: 134 MHGKFLDGRVIFVEEAKPRSELRQT---PRQNPR 164
>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 144 bits (364), Expect = 2e-32
Identities = 72/88 (81%), Positives = 80/88 (90%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTEESLRNAF+ FGQL EV LVMD+IANRPRGFAFLRYATEEE++KAI+G
Sbjct: 89 KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEG 148
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNTTQK 123
MHGKFL GRVIFVEVAKPRS+L Q+
Sbjct: 149 MHGKFLDGRVIFVEVAKPRSELAPRKQE 176
>gb|ESW24590.1| hypothetical protein PHAVU_004G143300g [Phaseolus vulgaris]
Length = 188
Score = 144 bits (362), Expect = 4e-32
Identities = 70/82 (85%), Positives = 78/82 (95%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTEESLRNAF+ FGQL EV LVMD+IANRPRGFAFLRYATEEE++KAI+G
Sbjct: 97 KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEG 156
Query: 206 MHGKFLHGRVIFVEVAKPRSQL 141
MHGKFL GRVIFVE+AKPRS+L
Sbjct: 157 MHGKFLDGRVIFVEIAKPRSEL 178
>ref|XP_004515251.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 183
Score = 143 bits (361), Expect = 5e-32
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTEESLRNAF+ FGQL EVNLVMDK+ANRPRGF FLRY TEEE++KAI+G
Sbjct: 93 KLYVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKVANRPRGFGFLRYETEEESKKAIEG 152
Query: 206 MHGKFLHGRVIFVEVAKPRSQLR 138
MHGKFL GRVIFVEVAKPRS+++
Sbjct: 153 MHGKFLDGRVIFVEVAKPRSKIQ 175
>ref|XP_006478116.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Citrus sinensis]
Length = 171
Score = 142 bits (358), Expect = 1e-31
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
RL+VSGLSFRT+E+SLRNAF+ FGQL EVNLVMDKIANRPRGFAFLRYATEEE+R+AI+G
Sbjct: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLVMDKIANRPRGFAFLRYATEEESRRAIEG 138
Query: 206 MHGKFLHGRVIFVEVAKPRSQLR 138
MHGKFL GRVIFVE+AK R++LR
Sbjct: 139 MHGKFLDGRVIFVEIAKSRAELR 161
>ref|XP_006441346.1| hypothetical protein CICLE_v10022555mg [Citrus clementina]
gi|567897718|ref|XP_006441347.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
gi|557543608|gb|ESR54586.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
gi|557543609|gb|ESR54587.1| hypothetical protein
CICLE_v10022555mg [Citrus clementina]
Length = 171
Score = 141 bits (355), Expect = 2e-31
Identities = 68/83 (81%), Positives = 79/83 (95%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
RL+VSGLSFRT+E+SLRNAF+ FGQL EVNL+MDKIANRPRGFAFLRYATEEE+R+AI+G
Sbjct: 79 RLFVSGLSFRTSEDSLRNAFQGFGQLVEVNLMMDKIANRPRGFAFLRYATEEESRRAIEG 138
Query: 206 MHGKFLHGRVIFVEVAKPRSQLR 138
MHGKFL GRVIFVE+AK R++LR
Sbjct: 139 MHGKFLDGRVIFVEIAKSRAELR 161
>gb|EMJ11299.1| hypothetical protein PRUPE_ppa019414mg, partial [Prunus persica]
Length = 129
Score = 141 bits (355), Expect = 2e-31
Identities = 72/88 (81%), Positives = 79/88 (89%)
Frame = -2
Query: 368 LSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDGMHGKFL 189
LSFRTTEESLRNAF+ FGQL EVNLVMD+IANRPRGFAFLRYATEEE++KAI+GMHGKFL
Sbjct: 43 LSFRTTEESLRNAFQNFGQLVEVNLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFL 102
Query: 188 HGRVIFVEVAKPRSQLRNTTQKP*SSPR 105
GRVIFVEVAKPRS+LR T P +PR
Sbjct: 103 DGRVIFVEVAKPRSELRQT---PKQNPR 127
>ref|XP_006340998.1| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
tuberosum]
Length = 163
Score = 139 bits (350), Expect = 9e-31
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+L+VSGLSFRTTEESLR AF FG+L EVNL+MDKIANRPRGFAF+RYATEEE++KAI+G
Sbjct: 71 KLFVSGLSFRTTEESLRKAFNNFGELVEVNLMMDKIANRPRGFAFIRYATEEESQKAIEG 130
Query: 206 MHGKFLHGRVIFVEVAKPRSQLR 138
MHGKFL GRVIFVEVAK RS+LR
Sbjct: 131 MHGKFLDGRVIFVEVAKSRSELR 153
>ref|XP_004246450.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Solanum
lycopersicum]
Length = 160
Score = 137 bits (346), Expect = 3e-30
Identities = 67/83 (80%), Positives = 76/83 (91%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+L+VSGLSFRTTEESLR F FG+L EVNL+MDKIANRPRGFAF+RYATEEE++KAI+G
Sbjct: 71 KLFVSGLSFRTTEESLRKTFNHFGELVEVNLMMDKIANRPRGFAFIRYATEEESQKAIEG 130
Query: 206 MHGKFLHGRVIFVEVAKPRSQLR 138
MHGKFL GRVIFVEVAK RS+LR
Sbjct: 131 MHGKFLDGRVIFVEVAKSRSELR 153
>ref|XP_006855610.1| hypothetical protein AMTR_s00044p00073410 [Amborella trichopoda]
gi|548859397|gb|ERN17077.1| hypothetical protein
AMTR_s00044p00073410 [Amborella trichopoda]
Length = 170
Score = 137 bits (345), Expect = 3e-30
Identities = 68/85 (80%), Positives = 77/85 (90%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTEESLRNAF+ FGQL EV LVMDK ANRPRGFAFL YATEEE+R+AI+G
Sbjct: 78 KLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDKRANRPRGFAFLEYATEEESRQAIEG 137
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNT 132
MHGKFL GRVIFVEVAK +S+L+ +
Sbjct: 138 MHGKFLDGRVIFVEVAKSKSELQKS 162
>ref|XP_006390546.1| hypothetical protein EUTSA_v10019191mg [Eutrema salsugineum]
gi|557086980|gb|ESQ27832.1| hypothetical protein
EUTSA_v10019191mg [Eutrema salsugineum]
Length = 187
Score = 134 bits (337), Expect = 3e-29
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTE++LR AFE FG+L VNLVMDK+ANRPRGFAFLRY TEEE+ KAI+G
Sbjct: 83 KLYVSGLSFRTTEDNLRKAFEQFGKLVFVNLVMDKVANRPRGFAFLRYETEEESMKAIEG 142
Query: 206 MHGKFLHGRVIFVEVAKPRSQLR 138
MHGKFL GRVIFVE AKPRS ++
Sbjct: 143 MHGKFLDGRVIFVEEAKPRSDIQ 165
>gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 133 bits (335), Expect = 5e-29
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
RLYVSGLSFRTTEESLRNAFE FGQLTEVNLVM+++A RPRGFAFL YA+EEE++ A++G
Sbjct: 68 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 127
Query: 206 MHGKFLHGRVIFVEVAKPRSQL 141
M GKFL GRVIFVEVA+ RS+L
Sbjct: 128 MQGKFLDGRVIFVEVARQRSEL 149
>gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 133 bits (335), Expect = 5e-29
Identities = 65/82 (79%), Positives = 75/82 (91%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
RLYVSGLSFRTTEESLRNAFE FGQLTEVNLVM+++A RPRGFAFL YA+EEE++ A++G
Sbjct: 71 RLYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEG 130
Query: 206 MHGKFLHGRVIFVEVAKPRSQL 141
M GKFL GRVIFVEVA+ RS+L
Sbjct: 131 MQGKFLDGRVIFVEVARQRSEL 152
>ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297334772|gb|EFH65190.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 132 bits (333), Expect = 8e-29
Identities = 66/95 (69%), Positives = 76/95 (80%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTE++LR+ FE FG+L +NLVMDK+ANRPRGFAFLRY TEEEA KAI G
Sbjct: 78 KLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQG 137
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNTTQKP*SSPRP 102
MHGKFL GRVIFVE AK RS + +P P+P
Sbjct: 138 MHGKFLDGRVIFVEEAKTRSDISRAKPRP-DFPKP 171
>ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding
glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis
thaliana] gi|114050615|gb|ABI49457.1| At1g73530
[Arabidopsis thaliana] gi|332197351|gb|AEE35472.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 181
Score = 130 bits (328), Expect = 3e-28
Identities = 67/99 (67%), Positives = 76/99 (76%), Gaps = 5/99 (5%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+LYVSGLSFRTTE++LR+ FE FG L +N+VMDK+ANRP+GFAFLRY TEEEA KAI G
Sbjct: 78 KLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQG 137
Query: 206 MHGKFLHGRVIFVEVAKPRSQL-----RNTTQKP*SSPR 105
MHGKFL GRVIFVE AK RS + R KP S PR
Sbjct: 138 MHGKFLDGRVIFVEEAKTRSDMSRAKPRRDFPKPQSKPR 176
>ref|XP_006301161.1| hypothetical protein CARUB_v10021559mg, partial [Capsella rubella]
gi|482569871|gb|EOA34059.1| hypothetical protein
CARUB_v10021559mg, partial [Capsella rubella]
Length = 182
Score = 129 bits (324), Expect = 9e-28
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+L+VSGLSFRTTE++LR+ FE FG+L +NLVMDK+ANRP+GFAFLRY TEEEA KAI+G
Sbjct: 76 KLFVSGLSFRTTEDTLRDTFEQFGKLVHMNLVMDKVANRPKGFAFLRYDTEEEAMKAIEG 135
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNTTQKP 120
MHGKFL GRVIFVE AK RS + +P
Sbjct: 136 MHGKFLDGRVIFVEEAKSRSDISRGKPRP 164
>ref|XP_006302887.1| hypothetical protein CARUB_v10021018mg [Capsella rubella]
gi|565490497|ref|XP_006302888.1| hypothetical protein
CARUB_v10021018mg [Capsella rubella]
gi|482571597|gb|EOA35785.1| hypothetical protein
CARUB_v10021018mg [Capsella rubella]
gi|482571598|gb|EOA35786.1| hypothetical protein
CARUB_v10021018mg [Capsella rubella]
Length = 181
Score = 128 bits (321), Expect = 2e-27
Identities = 61/89 (68%), Positives = 74/89 (83%)
Frame = -2
Query: 386 RLYVSGLSFRTTEESLRNAFEMFGQLTEVNLVMDKIANRPRGFAFLRYATEEEARKAIDG 207
+L+VSGLSFRTTE++LR+ FE FG+L +NLVMDK+ANRP+GFAFLRY TEEEA KAI+G
Sbjct: 78 KLFVSGLSFRTTEDTLRDTFEQFGKLVHMNLVMDKVANRPKGFAFLRYDTEEEAMKAIEG 137
Query: 206 MHGKFLHGRVIFVEVAKPRSQLRNTTQKP 120
MHGKFL G+VIFVE AK RS + +P
Sbjct: 138 MHGKFLDGKVIFVEEAKSRSDISRGKPRP 166