BLASTX nr result

ID: Rheum21_contig00011375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00011375
         (297 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF79619.1| unknown [Zea mays]                                      42   5e-06

>gb|ACF79619.1| unknown [Zea mays]
          Length = 93

 Score = 42.4 bits (98), Expect(2) = 5e-06
 Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +3

Query: 174 PCSSTSL---IQGPLSSVWKQWVKWCV 245
           PC+   L   + GPLSSVWK+WVKWCV
Sbjct: 10  PCTDIILLGKVSGPLSSVWKEWVKWCV 36



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +2

Query: 248 FGIQANAIITVPHDWR 295
           FGI+ANAII VP+DWR
Sbjct: 38  FGIEANAIIAVPYDWR 53


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