BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00011088
         (634 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358965.1| PREDICTED: putative pentatricopeptide repeat...    68   3e-09
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]    68   3e-09
ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat...    67   4e-09
emb|CBI20261.3| unnamed protein product [Vitis vinifera]               67   4e-09
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...    67   4e-09
ref|XP_004252116.1| PREDICTED: putative pentatricopeptide repeat...    60   5e-07
gb|ESW21488.1| hypothetical protein PHAVU_005G075100g [Phaseolus...    57   3e-06
gb|EXC08475.1| hypothetical protein L484_009618 [Morus notabilis]      56   8e-06
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...    56   8e-06

>ref|XP_006358965.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Solanum tuberosum]
          Length = 489

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 37/96 (38%), Positives = 56/96 (58%)
 Frame = -2

Query: 291 SFQAFSHSHETGHLKLPSCPEDAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSLLNED 112
           SFQ    SH   H ++ +  ++   AL+VQ LLK   + S   ++++       +L +ED
Sbjct: 15  SFQPKMVSHF--HRQMHTISDEENCALKVQTLLKNKADKS-VSDIFQSLSNCNFTL-SED 70

Query: 111 TVVDVLSRHRSDWKPALRFFNWVSRGSHPGGYTPGS 4
            +++VL RHRSDWKPA  FF WV  G +P GY+P +
Sbjct: 71  FILNVLKRHRSDWKPAFTFFKWVLAGENPSGYSPNT 106


>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = -2

Query: 228 DAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSL---LNEDTVVDVLSRHRSDWKPALR 58
           D + AL VQNLLK   +SS  E      +G        L +D V+DVL RHRSDW+PA  
Sbjct: 83  DGETALEVQNLLKTYRDSSVSE-----IEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYV 137

Query: 57  FFNWVSRGSHPGGYTPGSG 1
           FFNW SR     GY+PG G
Sbjct: 138 FFNWASRCGXESGYSPGCG 156


>ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Glycine max]
          Length = 481

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -2

Query: 288 FQAFSHSHETGHLK-LPSCPEDAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSLLNED 112
           FQ FS++ +T   + + SCP     A  +QNLLK   +   E+ LYR  D  G  L N D
Sbjct: 16  FQTFSNNVKTSTPRFVHSCP-----ATFIQNLLKFRRDKPTEQ-LYRALDQCGFDL-NHD 68

Query: 111 TVVDVLSRHRSDWKPALRFFNWVSRGSHPGGYTPGS 4
            V+DVL RHRSDW+PA  FFNW S+ +   GY P S
Sbjct: 69  LVLDVLRRHRSDWRPAHVFFNWASKTT--TGYQPSS 102


>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = -2

Query: 228 DAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSL---LNEDTVVDVLSRHRSDWKPALR 58
           D + AL VQNLLK   +SS  E      +G        L +D V+DVL RHRSDW+PA  
Sbjct: 83  DGETALEVQNLLKTYRDSSVSE-----IEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYV 137

Query: 57  FFNWVSRGSHPGGYTPGSG 1
           FFNW SR     GY+PG G
Sbjct: 138 FFNWASRCGIESGYSPGCG 156


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
 Frame = -2

Query: 228 DAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSL---LNEDTVVDVLSRHRSDWKPALR 58
           D + AL VQNLLK   +SS  E      +G        L +D V+DVL RHRSDW+PA  
Sbjct: 83  DGETALEVQNLLKTYRDSSVSE-----IEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYV 137

Query: 57  FFNWVSRGSHPGGYTPGSG 1
           FFNW SR     GY+PG G
Sbjct: 138 FFNWASRCGIESGYSPGCG 156


>ref|XP_004252116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Solanum lycopersicum]
          Length = 488

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 33/95 (34%), Positives = 48/95 (50%)
 Frame = -2

Query: 288 FQAFSHSHETGHLKLPSCPEDAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSLLNEDT 109
           F +FS      H  + +  ++   AL VQ  LK   + S  +      D      L+ED 
Sbjct: 13  FYSFSKMTSGFHRLMHTISDEENCALEVQTFLKNKADKSVSDIFQSLSDC--NFTLSEDF 70

Query: 108 VVDVLSRHRSDWKPALRFFNWVSRGSHPGGYTPGS 4
           +++VL RHRSDWKPA  FF W+  G +P  Y+P +
Sbjct: 71  ILNVLKRHRSDWKPAFIFFKWILAGENPCRYSPNT 105


>gb|ESW21488.1| hypothetical protein PHAVU_005G075100g [Phaseolus vulgaris]
          Length = 478

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/79 (45%), Positives = 44/79 (55%)
 Frame = -2

Query: 240 SCPEDAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSLLNEDTVVDVLSRHRSDWKPAL 61
           SCP     A  +QNLLK   +   ++ L+R  D  G  L N + V+DVL RHRSDW+PA 
Sbjct: 32  SCP-----ASLIQNLLKFRRDKPTDQ-LHRALDQCGVDL-NHNLVLDVLRRHRSDWRPAH 84

Query: 60  RFFNWVSRGSHPGGYTPGS 4
            FFNW    S   GY P S
Sbjct: 85  VFFNW----SKTAGYEPSS 99


>gb|EXC08475.1| hypothetical protein L484_009618 [Morus notabilis]
          Length = 530

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/97 (36%), Positives = 55/97 (56%)
 Frame = -2

Query: 294 PSFQAFSHSHETGHLKLPSCPEDAQIALRVQNLLKLSTNSSDEEELYRQFDGFGQSLLNE 115
           P  ++F++S ++   +    P D +IA+ +QN++K     S EE + R  D  G  L  E
Sbjct: 68  PFVRSFANSADSDEFE--GDPND-RIAVWIQNIIKFRREKSTEE-IERALDMCGFEL-TE 122

Query: 114 DTVVDVLSRHRSDWKPALRFFNWVSRGSHPGGYTPGS 4
           + +++VL RH+SDWK A  FFNW  +G    G+  GS
Sbjct: 123 ELLLNVLHRHQSDWKLAYVFFNWACKGGGSNGFLLGS 159


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
 Frame = -2

Query: 222 QIALRVQNLLKLSTNSSDE--EELYRQFDGFGQSLLNEDTVVDVLSRHRSDWKPALRFFN 49
           ++AL+VQN+LK   +S     E    Q +      + ED ++ VL RHRSDWKPAL FFN
Sbjct: 47  ELALKVQNVLKNYRDSPTRKIELALTQCN----PTVTEDLILKVLKRHRSDWKPALIFFN 102

Query: 48  WVSRGSHPGGYTPGSG 1
           WVS+G   G    GSG
Sbjct: 103 WVSKG---GKVLMGSG 115