BLASTX nr result

ID: Rheum21_contig00010871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00010871
         (1930 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004981234.1| PREDICTED: uncharacterized protein LOC101757...    67   3e-08
gb|EOX93184.1| HAT transposon superfamily, putative [Theobroma c...    64   2e-07

>ref|XP_004981234.1| PREDICTED: uncharacterized protein LOC101757413 [Setaria italica]
          Length = 803

 Score = 67.0 bits (162), Expect = 3e-08
 Identities = 76/325 (23%), Positives = 130/325 (40%), Gaps = 31/325 (9%)
 Frame = +1

Query: 100 GRPRDEFAWRH--VTRLNDGSRWECKFCGKIFAGSA-SRIINHLSGKGKDIRVCPRVPME 270
           G  + + AW+H  + R     R +C +CGK F G    R   HL+ +  +   CP+VP +
Sbjct: 26  GAQKHDPAWKHCLMVRAEGRVRLKCAYCGKHFLGGGIHRFKEHLARRPGNACCCPKVPRD 85

Query: 271 IREEALNRRD--AANKIGEMMSXXXXXXXXXXXXMAPLSSGDINLVGETDMMSNYVLPRG 444
           +++  +   D  AA K+   ++                S       G TD    +++P  
Sbjct: 86  VQDTMMRSLDAVAAKKMQRKLANALPPGDMRRFAPTDASPASAASGGATD-SPIHMIPLN 144

Query: 445 DLVD-----TNHSVPSLSEIFSGGGESDVASSDLNELMSEFGR-LITPSAVAQEVSG--- 597
           +++D      +   P L E   G     V+S    +++S      +TP  + Q V     
Sbjct: 145 EVLDFEPVPLDEQRPPLPETMRG----SVSSKKKRKMLSNASTPPLTPPTLQQHVPSTPQ 200

Query: 598 --------MEVDSVVVNTAHLG--------VTDAFMKLLMFINCSSSAVTDFMESPHLRE 729
                   M VD+V  ++ H G        V+ A  + L  +     AV      P L  
Sbjct: 201 TNPLHQVVMAVDAVTPSSGHFGHAGLDKEQVSVAVGRFLYDVGVPLEAVNSVYFQPMLEA 260

Query: 730 FLERASEYGVPSGLLAGD-ADVVIRKSVLNIKEEVYRNTLMLKESWKTTGCTLMMFEGIF 906
               AS  G P  L   D    +++KS+    ++        K SW  TGC+++  E I 
Sbjct: 261 I---ASAGGRPEALSYHDFRGHILKKSL----DDATSRLEFFKGSWTRTGCSVLADEWI- 312

Query: 907 PSRDQDMCMFGFYCPKGIVFVEAPD 981
             + + +  F  YCP+G +F+++ D
Sbjct: 313 TDKGRTLINFSVYCPEGTMFLKSVD 337


>gb|EOX93184.1| HAT transposon superfamily, putative [Theobroma cacao]
          Length = 750

 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 12/305 (3%)
 Frame = +1

Query: 103 RPRDEFAWRHVTRLNDGSRWE--CKFCGKIFAGSA-SRIINHLSGKGKDIRVCPRVPMEI 273
           + + + AW H     +G R +  C +CGK+F G    R   HL+G+     +C +VP  +
Sbjct: 12  KQKQDPAWNHCEAFKNGERLQIKCMYCGKMFKGGGIHRFKEHLAGRKGQGPICEQVPPGV 71

Query: 274 R---EEALN-----RRDAANKIGEMMSXXXXXXXXXXXXMAPLSSGDINLVGETDMMSNY 429
           R   +E+LN     + +  N I E+++                 +G+I+    +D ++N 
Sbjct: 72  RALMQESLNGVLLKQDNKQNAIPELLACGGSSPH----------AGEIDKSAYSDDVNNG 121

Query: 430 VLPRGDLVDTNHSVPSLSEIFSGGGESDVASSDLNELMSEFGRLITPSAVAQEVSGMEVD 609
           V P   L   N   P  S + +G GE      D  +   +   L    + A+    + V 
Sbjct: 122 VKPIQVL---NSLEPDSSLVLNGKGEVSQGIRDSKKRGRDRSLLANSHSCAKSDLAL-VS 177

Query: 610 SVVVNTAHLGVTDAFMKLLMFINCSSSAVTDFMESPHLREFLERASEYGVPSGLLAGDAD 789
               N  H+ +     + L  I  +  AV      P +       S    PS   + D  
Sbjct: 178 IGAENPVHMAIG----RFLYDIGVNLDAVNSVYFQPMIDAIASTGSGIVPPS---SQDLR 230

Query: 790 VVIRKSVLN-IKEEVYRNTLMLKESWKTTGCTLMMFEGIFPSRDQDMCMFGFYCPKGIVF 966
             I K+V+  +K+++ RN  M    W  TGC++++ E   P   + +  F  YCP+  VF
Sbjct: 231 GWILKNVMEEVKDDIDRNKTM----WGKTGCSILV-EQWSPKSGRTLLSFLVYCPQATVF 285

Query: 967 VEAPD 981
           +++ D
Sbjct: 286 LKSVD 290


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