BLASTX nr result
ID: Rheum21_contig00010308
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00010308
(386 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX93802.1| 40S ribosomal protein S8 isoform 3 [Theobroma cacao] 60 6e-09
gb|ESW21662.1| hypothetical protein PHAVU_005G089100g [Phaseolus... 60 7e-09
ref|XP_002534344.1| 40S ribosomal protein S8, putative [Ricinus ... 60 9e-09
ref|XP_006601753.1| PREDICTED: uncharacterized protein LOC100500... 60 9e-09
ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycin... 60 9e-09
ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycin... 60 9e-09
gb|AFW73090.1| putative ribosomal protein S8e family protein [Ze... 59 1e-08
ref|XP_003574981.1| PREDICTED: 40S ribosomal protein S8-like [Br... 60 1e-08
ref|XP_003557224.1| PREDICTED: 40S ribosomal protein S8-like [Br... 60 1e-08
ref|XP_006484807.1| PREDICTED: 40S ribosomal protein S8-like [Ci... 60 1e-08
ref|XP_006452497.1| hypothetical protein CICLE_v10009415mg [Citr... 60 1e-08
ref|XP_006437243.1| hypothetical protein CICLE_v10032694mg [Citr... 60 1e-08
gb|ABL85034.1| ribosomal subunit 8E protein [Brachypodium sylvat... 60 1e-08
ref|NP_001105391.1| 40S ribosomal protein S8 [Zea mays] gi|62267... 60 1e-08
ref|XP_004975334.1| PREDICTED: 40S ribosomal protein S8-like [Se... 60 1e-08
ref|XP_004953910.1| PREDICTED: 40S ribosomal protein S8-like [Se... 60 1e-08
ref|XP_002452585.1| hypothetical protein SORBIDRAFT_04g028530 [S... 60 1e-08
ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vi... 60 1e-08
gb|EAY93669.1| hypothetical protein OsI_15456 [Oryza sativa Indi... 60 1e-08
ref|NP_001052526.1| Os04g0349500 [Oryza sativa Japonica Group] g... 60 1e-08
>gb|EOX93802.1| 40S ribosomal protein S8 isoform 3 [Theobroma cacao]
Length = 195
Score = 59.7 bits (143), Expect(2) = 6e-09
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 20 LSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 59
Score = 26.2 bits (56), Expect(2) = 6e-09
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
RYELGRQ NTKL
Sbjct: 8 RYELGRQPANTKL 20
>gb|ESW21662.1| hypothetical protein PHAVU_005G089100g [Phaseolus vulgaris]
Length = 217
Score = 59.7 bits (143), Expect(2) = 7e-09
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.8 bits (55), Expect(2) = 7e-09
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ+ NTKL
Sbjct: 26 KYELGRQSANTKL 38
>ref|XP_002534344.1| 40S ribosomal protein S8, putative [Ricinus communis]
gi|223525453|gb|EEF28038.1| 40S ribosomal protein S8,
putative [Ricinus communis]
Length = 221
Score = 59.7 bits (143), Expect(2) = 9e-09
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.4 bits (54), Expect(2) = 9e-09
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQAANTKL 38
>ref|XP_006601753.1| PREDICTED: uncharacterized protein LOC100500112 isoform X1 [Glycine
max]
Length = 217
Score = 59.7 bits (143), Expect(2) = 9e-09
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.4 bits (54), Expect(2) = 9e-09
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQAANTKL 38
>ref|NP_001240243.1| uncharacterized protein LOC100813170 [Glycine max]
gi|255636051|gb|ACU18370.1| unknown [Glycine max]
Length = 217
Score = 59.7 bits (143), Expect(2) = 9e-09
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.4 bits (54), Expect(2) = 9e-09
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQAANTKL 38
>ref|NP_001236970.1| uncharacterized protein LOC100500112 [Glycine max]
gi|255629291|gb|ACU14990.1| unknown [Glycine max]
Length = 217
Score = 59.7 bits (143), Expect(2) = 9e-09
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.4 bits (54), Expect(2) = 9e-09
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQAANTKL 38
>gb|AFW73090.1| putative ribosomal protein S8e family protein [Zea mays]
Length = 423
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEA+TRKT
Sbjct: 204 LSSNKTVRRVCVRGGNVKWRALRLDTGNYSWGSEALTRKT 243
Score = 26.2 bits (56), Expect(2) = 1e-08
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
RYELGRQ NTKL
Sbjct: 192 RYELGRQPANTKL 204
>ref|XP_003574981.1| PREDICTED: 40S ribosomal protein S8-like [Brachypodium distachyon]
Length = 229
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_003557224.1| PREDICTED: 40S ribosomal protein S8-like [Brachypodium distachyon]
Length = 226
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_006484807.1| PREDICTED: 40S ribosomal protein S8-like [Citrus sinensis]
Length = 223
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_006452497.1| hypothetical protein CICLE_v10009415mg [Citrus clementina]
gi|568842040|ref|XP_006474961.1| PREDICTED: 40S
ribosomal protein S8-like [Citrus sinensis]
gi|557555723|gb|ESR65737.1| hypothetical protein
CICLE_v10009415mg [Citrus clementina]
Length = 223
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_006437243.1| hypothetical protein CICLE_v10032694mg [Citrus clementina]
gi|557539439|gb|ESR50483.1| hypothetical protein
CICLE_v10032694mg [Citrus clementina]
Length = 223
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>gb|ABL85034.1| ribosomal subunit 8E protein [Brachypodium sylvaticum]
Length = 223
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|NP_001105391.1| 40S ribosomal protein S8 [Zea mays]
gi|6226702|sp|Q08069.2|RS8_MAIZE RecName: Full=40S
ribosomal protein S8 gi|1498053|gb|AAB06330.1| ribosomal
protein S8 [Zea mays] gi|194692698|gb|ACF80433.1|
unknown [Zea mays] gi|195605614|gb|ACG24637.1| 40S
ribosomal protein S8 [Zea mays]
gi|413926193|gb|AFW66125.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926197|gb|AFW66129.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926198|gb|AFW66130.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926206|gb|AFW66138.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926210|gb|AFW66142.1| putative ribosomal protein
S8e family protein [Zea mays]
Length = 221
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_004975334.1| PREDICTED: 40S ribosomal protein S8-like [Setaria italica]
Length = 221
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_004953910.1| PREDICTED: 40S ribosomal protein S8-like [Setaria italica]
Length = 221
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_002452585.1| hypothetical protein SORBIDRAFT_04g028530 [Sorghum bicolor]
gi|241932416|gb|EES05561.1| hypothetical protein
SORBIDRAFT_04g028530 [Sorghum bicolor]
Length = 221
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|XP_002269042.2| PREDICTED: 40S ribosomal protein S8-like [Vitis vinifera]
gi|147772691|emb|CAN64937.1| hypothetical protein
VITISV_011515 [Vitis vinifera]
Length = 221
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 30/40 (75%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT VKWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>gb|EAY93669.1| hypothetical protein OsI_15456 [Oryza sativa Indica Group]
Length = 221
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT +KWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNLKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38
>ref|NP_001052526.1| Os04g0349500 [Oryza sativa Japonica Group]
gi|32489919|emb|CAE05511.1| OSJNBa0038P21.4 [Oryza
sativa Japonica Group] gi|113564097|dbj|BAF14440.1|
Os04g0349500 [Oryza sativa Japonica Group]
gi|125589973|gb|EAZ30323.1| hypothetical protein
OsJ_14370 [Oryza sativa Japonica Group]
gi|215686988|dbj|BAG90858.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 221
Score = 59.7 bits (143), Expect(2) = 1e-08
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = -2
Query: 244 LSSNKTXXXXXXXXXXVKWRALRLDTGNYSWGSEAVTRKT 125
LSSNKT +KWRALRLDTGNYSWGSEAVTRKT
Sbjct: 38 LSSNKTVRRVRVRGGNLKWRALRLDTGNYSWGSEAVTRKT 77
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 287 RYELGRQTTNTKL 249
+YELGRQ NTKL
Sbjct: 26 KYELGRQPANTKL 38