BLASTX nr result
ID: Rheum21_contig00009995
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009995
(925 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298819.1| PREDICTED: uncharacterized RNA-binding prote... 178 3e-42
gb|EOY24793.1| RNA-binding family protein [Theobroma cacao] 177 4e-42
ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putati... 177 5e-42
gb|EMJ10802.1| hypothetical protein PRUPE_ppa011480mg [Prunus pe... 177 6e-42
ref|XP_002304510.1| hypothetical protein POPTR_0003s13030g [Popu... 177 6e-42
ref|XP_006476526.1| PREDICTED: uncharacterized RNA-binding prote... 176 1e-41
ref|XP_006476525.1| PREDICTED: uncharacterized RNA-binding prote... 176 1e-41
ref|XP_006476524.1| PREDICTED: uncharacterized RNA-binding prote... 176 1e-41
gb|EXB37321.1| Uncharacterized RNA-binding protein [Morus notabi... 171 4e-40
ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding prote... 171 5e-40
ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding prote... 157 4e-36
ref|XP_004973345.1| PREDICTED: serine/arginine-rich splicing fac... 157 7e-36
ref|XP_001756218.1| predicted protein [Physcomitrella patens] gi... 157 7e-36
ref|NP_001061706.1| Os08g0385900 [Oryza sativa Japonica Group] g... 156 1e-35
gb|EEE68615.1| hypothetical protein OsJ_27155 [Oryza sativa Japo... 156 1e-35
ref|XP_006659363.1| PREDICTED: serine/arginine-rich splicing fac... 155 3e-35
ref|XP_006848090.1| hypothetical protein AMTR_s00029p00209460 [A... 153 8e-35
ref|XP_001778182.1| predicted protein [Physcomitrella patens] gi... 152 2e-34
gb|ADE75667.1| unknown [Picea sitchensis] 151 3e-34
ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding prote... 150 5e-34
>ref|XP_004298819.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Fragaria vesca subsp. vesca]
Length = 222
Score = 178 bits (451), Expect = 3e-42
Identities = 82/99 (82%), Positives = 95/99 (95%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+ASNPGNNLYVTGLSTRVTSAD++K+F KEGKV +C+LVTDPRS+ESRGFAF+TME+ ED
Sbjct: 41 DASNPGNNLYVTGLSTRVTSADVEKFFNKEGKVLDCHLVTDPRSRESRGFAFVTMETVED 100
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
A+RC+KYLNR+VLEGRL+TVEKAKR RGRTPTPGRYQGL
Sbjct: 101 AERCIKYLNRSVLEGRLVTVEKAKRKRGRTPTPGRYQGL 139
>gb|EOY24793.1| RNA-binding family protein [Theobroma cacao]
Length = 200
Score = 177 bits (450), Expect = 4e-42
Identities = 83/99 (83%), Positives = 94/99 (94%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+ASNPGNNLYVTGLSTRVT+ADL+KYFG EGKV EC+LVTDPR++ESRGFAF+TME+ E
Sbjct: 37 DASNPGNNLYVTGLSTRVTTADLEKYFGNEGKVVECHLVTDPRTRESRGFAFVTMETVEG 96
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
A+RC+KYLNR+VLEGRLITVEKAKRSRGRTPTPGRY GL
Sbjct: 97 AERCIKYLNRSVLEGRLITVEKAKRSRGRTPTPGRYHGL 135
>ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
gi|223549733|gb|EEF51221.1|
Arginine/serine-rich-splicing factor, putative [Ricinus
communis]
Length = 204
Score = 177 bits (449), Expect = 5e-42
Identities = 83/99 (83%), Positives = 94/99 (94%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+A+NPGNNLYVTGLSTRVT+ DL+KYFGKEGKV EC+LVTDPR++ESRGFAF+TME+ ED
Sbjct: 41 DAANPGNNLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLED 100
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
A+RCVKYLNR+VLEGRLITVEKAKR RGRTPTPGRY GL
Sbjct: 101 AERCVKYLNRSVLEGRLITVEKAKRRRGRTPTPGRYHGL 139
>gb|EMJ10802.1| hypothetical protein PRUPE_ppa011480mg [Prunus persica]
Length = 208
Score = 177 bits (448), Expect = 6e-42
Identities = 82/99 (82%), Positives = 94/99 (94%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+ASNPGNNLYVTGLSTRVTS+DL+K+F KEGKV EC+LVTDPR++ESRGF F+TME+ ED
Sbjct: 41 DASNPGNNLYVTGLSTRVTSSDLEKFFNKEGKVLECHLVTDPRTRESRGFGFVTMETVED 100
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
A+RCVKYLNR+VLEGRL+TVEKAKR RGRTPTPGRYQGL
Sbjct: 101 AERCVKYLNRSVLEGRLVTVEKAKRKRGRTPTPGRYQGL 139
>ref|XP_002304510.1| hypothetical protein POPTR_0003s13030g [Populus trichocarpa]
gi|222841942|gb|EEE79489.1| hypothetical protein
POPTR_0003s13030g [Populus trichocarpa]
Length = 208
Score = 177 bits (448), Expect = 6e-42
Identities = 83/99 (83%), Positives = 94/99 (94%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+ASNPGNNLYVTGLSTRVTS+DL+KYF EGKV EC+LVTDPR++ESRGFAF+TME+ ED
Sbjct: 42 DASNPGNNLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVED 101
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
A+RCVKYLNR+VLEGR+ITVEKAKR RGRTPTPGRYQGL
Sbjct: 102 ANRCVKYLNRSVLEGRVITVEKAKRKRGRTPTPGRYQGL 140
>ref|XP_006476526.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X3 [Citrus sinensis]
Length = 156
Score = 176 bits (445), Expect = 1e-41
Identities = 82/99 (82%), Positives = 94/99 (94%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+A+NPGNNLYVTGLSTRVT+ADL+K+FG EGKVTEC+LVTDPR++ESRGFAF+TME+ E
Sbjct: 44 DAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETVEG 103
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRC+KYLNR+VLEGRLITVEKAKRSRGRTPTPG Y GL
Sbjct: 104 ADRCIKYLNRSVLEGRLITVEKAKRSRGRTPTPGHYHGL 142
>ref|XP_006476525.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X2 [Citrus sinensis]
Length = 201
Score = 176 bits (445), Expect = 1e-41
Identities = 82/99 (82%), Positives = 94/99 (94%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+A+NPGNNLYVTGLSTRVT+ADL+K+FG EGKVTEC+LVTDPR++ESRGFAF+TME+ E
Sbjct: 32 DAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETVEG 91
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRC+KYLNR+VLEGRLITVEKAKRSRGRTPTPG Y GL
Sbjct: 92 ADRCIKYLNRSVLEGRLITVEKAKRSRGRTPTPGHYHGL 130
>ref|XP_006476524.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Citrus sinensis]
Length = 213
Score = 176 bits (445), Expect = 1e-41
Identities = 82/99 (82%), Positives = 94/99 (94%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+A+NPGNNLYVTGLSTRVT+ADL+K+FG EGKVTEC+LVTDPR++ESRGFAF+TME+ E
Sbjct: 44 DAANPGNNLYVTGLSTRVTNADLEKFFGGEGKVTECHLVTDPRTRESRGFAFVTMETVEG 103
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRC+KYLNR+VLEGRLITVEKAKRSRGRTPTPG Y GL
Sbjct: 104 ADRCIKYLNRSVLEGRLITVEKAKRSRGRTPTPGHYHGL 142
>gb|EXB37321.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 314
Score = 171 bits (433), Expect = 4e-40
Identities = 79/98 (80%), Positives = 90/98 (91%)
Frame = +3
Query: 174 ASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTEDA 353
A NPGNNLYVTGLSTRVT++DL+K+FGKEGKV C+LVTDP +KESRGF F+TME+ EDA
Sbjct: 152 ADNPGNNLYVTGLSTRVTTSDLEKFFGKEGKVVACHLVTDPHTKESRGFGFVTMETVEDA 211
Query: 354 DRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
DRC+K LNR+VLEGRL+TVEKAKR RGRTPTPGRYQGL
Sbjct: 212 DRCIKQLNRSVLEGRLVTVEKAKRKRGRTPTPGRYQGL 249
>ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
vinifera]
Length = 211
Score = 171 bits (432), Expect = 5e-40
Identities = 79/99 (79%), Positives = 90/99 (90%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+A NPGNNLYVTGLSTRV ++DL+KYF EGKV EC+LVTDPR++ESRGF F+TME+ ED
Sbjct: 48 DAVNPGNNLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVED 107
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRC+KYLNR+VLEGRLITVEKAKR RGRTPTPGRY GL
Sbjct: 108 ADRCIKYLNRSVLEGRLITVEKAKRRRGRTPTPGRYHGL 146
>ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Glycine max]
Length = 191
Score = 157 bits (398), Expect = 4e-36
Identities = 71/98 (72%), Positives = 85/98 (86%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+ NPGNNLYVTGLSTR+T +DL KYF KEGKV +C+LV DP +KESRGF F+TME+ +D
Sbjct: 40 DVENPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMETNDD 99
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQG 464
A+ C+KYLNR+V EGRLITVEKAKR+RGRTPTPG+Y G
Sbjct: 100 AECCIKYLNRSVFEGRLITVEKAKRNRGRTPTPGKYCG 137
>ref|XP_004973345.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform X1
[Setaria italica] gi|514795629|ref|XP_004973346.1|
PREDICTED: serine/arginine-rich splicing factor 2-like
isoform X2 [Setaria italica]
gi|514795632|ref|XP_004973347.1| PREDICTED:
serine/arginine-rich splicing factor 2-like isoform X3
[Setaria italica]
Length = 283
Score = 157 bits (396), Expect = 7e-36
Identities = 73/95 (76%), Positives = 85/95 (89%)
Frame = +3
Query: 180 NPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTEDADR 359
NPGNNLYVTGLSTRVT DL+K+F KEGKV C++V DPRSKESRGFAF+TM++ EDA R
Sbjct: 86 NPGNNLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRSKESRGFAFVTMDTVEDARR 145
Query: 360 CVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQG 464
C+KYL+RTVLEGRL+TVEKAKR+R RTPTPG+Y G
Sbjct: 146 CIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG 180
>ref|XP_001756218.1| predicted protein [Physcomitrella patens]
gi|162692728|gb|EDQ79084.1| predicted protein
[Physcomitrella patens]
Length = 158
Score = 157 bits (396), Expect = 7e-36
Identities = 71/99 (71%), Positives = 85/99 (85%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+A+NPGNNLYVTGLSTRVT DL ++F +EGKV EC LV DPR++ESRGF F+TM++ +D
Sbjct: 11 DATNPGNNLYVTGLSTRVTEKDLDEHFSREGKVVECRLVVDPRTRESRGFGFVTMDNADD 70
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRCVKYLNR+ LEGR+ITVEKAKR R RTPTPG Y G+
Sbjct: 71 ADRCVKYLNRSTLEGRIITVEKAKRKRARTPTPGEYLGV 109
>ref|NP_001061706.1| Os08g0385900 [Oryza sativa Japonica Group]
gi|40253470|dbj|BAD05420.1| putative transformer-SR
ribonucleoprotein [Oryza sativa Japonica Group]
gi|40253902|dbj|BAD05836.1| putative transformer-SR
ribonucleoprotein [Oryza sativa Japonica Group]
gi|113623675|dbj|BAF23620.1| Os08g0385900 [Oryza sativa
Japonica Group] gi|215697910|dbj|BAG92152.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 279
Score = 156 bits (394), Expect = 1e-35
Identities = 72/95 (75%), Positives = 85/95 (89%)
Frame = +3
Query: 180 NPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTEDADR 359
NPGNNLYVTGLSTRVT DL+K+F KEGKV C++V DPR+KESRGFAF+TM+S +DA R
Sbjct: 88 NPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDSVDDARR 147
Query: 360 CVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQG 464
C+KYL+RTVLEGRL+TVEKAKR+R RTPTPG+Y G
Sbjct: 148 CIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG 182
>gb|EEE68615.1| hypothetical protein OsJ_27155 [Oryza sativa Japonica Group]
Length = 271
Score = 156 bits (394), Expect = 1e-35
Identities = 72/95 (75%), Positives = 85/95 (89%)
Frame = +3
Query: 180 NPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTEDADR 359
NPGNNLYVTGLSTRVT DL+K+F KEGKV C++V DPR+KESRGFAF+TM+S +DA R
Sbjct: 80 NPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDSVDDARR 139
Query: 360 CVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQG 464
C+KYL+RTVLEGRL+TVEKAKR+R RTPTPG+Y G
Sbjct: 140 CIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG 174
>ref|XP_006659363.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform X1
[Oryza brachyantha]
Length = 277
Score = 155 bits (391), Expect = 3e-35
Identities = 71/95 (74%), Positives = 85/95 (89%)
Frame = +3
Query: 180 NPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTEDADR 359
NPGNNLYVTGLSTRVT DL+K+F KEGKV C++V DPR+KESRGFAF+TM++ +DA R
Sbjct: 86 NPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDTVDDARR 145
Query: 360 CVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQG 464
C+KYL+RTVLEGRL+TVEKAKR+R RTPTPG+Y G
Sbjct: 146 CIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG 180
>ref|XP_006848090.1| hypothetical protein AMTR_s00029p00209460 [Amborella trichopoda]
gi|548851395|gb|ERN09671.1| hypothetical protein
AMTR_s00029p00209460 [Amborella trichopoda]
Length = 382
Score = 153 bits (387), Expect = 8e-35
Identities = 69/99 (69%), Positives = 86/99 (86%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
E NPGNNLYVTGLS+R TS DL+K+F EG VT+C+LV DPR++ESRGF F+TM + E+
Sbjct: 38 EVENPGNNLYVTGLSSRATSRDLEKHFASEGTVTDCHLVVDPRTRESRGFGFVTMSTVEE 97
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRC+KYL+R+VLEGR+ITVEKA+R RGRTPTPG+Y G+
Sbjct: 98 ADRCLKYLDRSVLEGRVITVEKARRRRGRTPTPGKYLGV 136
>ref|XP_001778182.1| predicted protein [Physcomitrella patens]
gi|162670395|gb|EDQ56964.1| predicted protein
[Physcomitrella patens]
Length = 172
Score = 152 bits (384), Expect = 2e-34
Identities = 69/99 (69%), Positives = 83/99 (83%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+ +NPGNNLYVTGLSTRV DL+++F +EGKV EC LV DPR++ESRGF F+TME ED
Sbjct: 7 DINNPGNNLYVTGLSTRVNEKDLQEHFSREGKVLECRLVLDPRTRESRGFGFVTMEHLED 66
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
A+RC+KYLNR+ LEGR+ITVEKAKR R RTPTPG Y G+
Sbjct: 67 AERCIKYLNRSTLEGRMITVEKAKRKRARTPTPGEYLGV 105
>gb|ADE75667.1| unknown [Picea sitchensis]
Length = 216
Score = 151 bits (382), Expect = 3e-34
Identities = 69/99 (69%), Positives = 83/99 (83%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+ SNPGNNLYVTGLS RV ADL++ F +EGKV +C +V DPRS+ESRGF F+TM++ E+
Sbjct: 57 DVSNPGNNLYVTGLSARVVEADLEELFSQEGKVVDCRIVVDPRSRESRGFGFVTMDTLEN 116
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRCVKYLNR+ LEGR+ITVEKAKR R RTPTPG Y G+
Sbjct: 117 ADRCVKYLNRSTLEGRIITVEKAKRKRARTPTPGSYLGV 155
>ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Glycine max]
Length = 362
Score = 150 bits (380), Expect = 5e-34
Identities = 70/99 (70%), Positives = 85/99 (85%)
Frame = +3
Query: 171 EASNPGNNLYVTGLSTRVTSADLKKYFGKEGKVTECNLVTDPRSKESRGFAFITMESTED 350
+A NPGNNLYVTGLS R+T +L+K+F EGKV + +LV DP ++ESRGF F+TME+ E+
Sbjct: 42 DAENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEE 101
Query: 351 ADRCVKYLNRTVLEGRLITVEKAKRSRGRTPTPGRYQGL 467
ADRCVKYLNR+VLEGR+ITVEKAKR RGRTPTPG+Y GL
Sbjct: 102 ADRCVKYLNRSVLEGRVITVEKAKRRRGRTPTPGKYLGL 140