BLASTX nr result
ID: Rheum21_contig00009965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009965
(430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634465.1| PREDICTED: uncharacterized protein LOC100853... 64 2e-08
emb|CBI19898.3| unnamed protein product [Vitis vinifera] 64 2e-08
ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I sub... 63 4e-08
ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I sub... 62 1e-07
ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I sub... 61 2e-07
gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea] 59 9e-07
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ... 58 1e-06
ref|XP_002511364.1| hypothetical protein RCOM_1509920 [Ricinus c... 58 2e-06
ref|XP_002318989.1| transcription factor S-II domain-containing ... 56 4e-06
gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma c... 55 1e-05
>ref|XP_003634465.1| PREDICTED: uncharacterized protein LOC100853901 [Vitis vinifera]
Length = 104
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
M YSR+RDFMFC+LCGTML ++S +A CPLCKS++ VK
Sbjct: 1 MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVK 39
>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
Length = 126
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
M YSR+RDFMFC+LCGTML ++S +A CPLCKS++ VK
Sbjct: 1 MAYSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVK 39
>ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cicer
arietinum]
Length = 116
Score = 63.2 bits (152), Expect = 4e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
M YSR RDF+FC+LCGTML++ S +A CPLCK+K+N+K
Sbjct: 1 MSYSRGRDFLFCNLCGTMLAVPSTEYAQCPLCKTKQNIK 39
>ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
X1 [Cicer arietinum] gi|502132990|ref|XP_004501609.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X2 [Cicer arietinum]
gi|502132992|ref|XP_004501610.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X3 [Cicer
arietinum]
Length = 116
Score = 61.6 bits (148), Expect = 1e-07
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
M YSR RDF+FC LCGTML++ S +A CPLCK++KN++
Sbjct: 1 MSYSRGRDFLFCHLCGTMLAVPSTEYAQCPLCKTRKNIR 39
>ref|XP_004237422.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
[Solanum lycopersicum] gi|565396690|ref|XP_006363942.1|
PREDICTED: DNA-directed RNA polymerase I subunit
RPA12-like isoform X1 [Solanum tuberosum]
gi|565396692|ref|XP_006363943.1| PREDICTED: DNA-directed
RNA polymerase I subunit RPA12-like isoform X2 [Solanum
tuberosum]
Length = 121
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
M Y R+RDFMFC++CGTML+ +S +A CPLCK KK VK
Sbjct: 1 MAYCRQRDFMFCEMCGTMLAFDSPKYARCPLCKFKKRVK 39
>gb|EPS67751.1| hypothetical protein M569_07023 [Genlisea aurea]
Length = 124
Score = 58.5 bits (140), Expect = 9e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +1
Query: 319 YSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
Y RDFMFCD+CGTM+S NS+++A CP+CK +K+ K
Sbjct: 4 YRTNRDFMFCDICGTMMSFNSLDYAQCPVCKIRKSFK 40
>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
gi|357470681|ref|XP_003605625.1| DNA-directed RNA
polymerase I subunit RPA12 [Medicago truncatula]
gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
I subunit RPA12 [Medicago truncatula]
Length = 115
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 319 YSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
YSR RDF+FC LCGTML++ S ++A CPLCK+K N+K
Sbjct: 2 YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIK 38
>ref|XP_002511364.1| hypothetical protein RCOM_1509920 [Ricinus communis]
gi|223550479|gb|EEF51966.1| hypothetical protein
RCOM_1509920 [Ricinus communis]
Length = 61
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKN 423
M +R FMFCDLCGTMLSL + NHA CPLCK KK+
Sbjct: 1 MALARGGGFMFCDLCGTMLSLTTTNHAECPLCKFKKS 37
>ref|XP_002318989.1| transcription factor S-II domain-containing family protein [Populus
trichocarpa] gi|222857365|gb|EEE94912.1| transcription
factor S-II domain-containing family protein [Populus
trichocarpa]
Length = 117
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
M ++R DFMFCDLCGTM+ L S H CPLCK KK+ K
Sbjct: 1 MAHARGGDFMFCDLCGTMMFLYSKEHVECPLCKFKKSAK 39
>gb|EOY15075.1| TFIIB zinc-binding protein, putative [Theobroma cacao]
Length = 119
Score = 55.1 bits (131), Expect = 1e-05
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = +1
Query: 313 MDYSRRRDFMFCDLCGTMLSLNSVNHAHCPLCKSKKNVK 429
M YS+ RDFMFC CG+MLSL S +A CPLCK K + K
Sbjct: 1 MAYSQARDFMFCSFCGSMLSLVSPKYAECPLCKFKPSAK 39