BLASTX nr result
ID: Rheum21_contig00009720
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009720
(374 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi... 121 8e-26
emb|CBI34688.3| unnamed protein product [Vitis vinifera] 121 8e-26
ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 121 1e-25
ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu... 121 1e-25
ref|XP_006837051.1| hypothetical protein AMTR_s00110p00064100 [A... 120 2e-25
ref|XP_002868608.1| hypothetical protein ARALYDRAFT_493857 [Arab... 120 2e-25
emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera] 119 4e-25
ref|XP_004300199.1| PREDICTED: uncharacterized protein LOC101295... 118 9e-25
ref|XP_006283208.1| hypothetical protein CARUB_v10004239mg [Caps... 117 1e-24
ref|XP_006344899.1| PREDICTED: RNA-binding protein NOB1-like [So... 116 3e-24
gb|EXB37378.1| hypothetical protein L484_024306 [Morus notabilis] 116 3e-24
dbj|BAD43281.1| unknown protein [Arabidopsis thaliana] 115 5e-24
ref|NP_198935.1| RNA-binding protein NOB1 [Arabidopsis thaliana]... 115 5e-24
gb|EMJ10258.1| hypothetical protein PRUPE_ppa016934mg [Prunus pe... 115 6e-24
ref|XP_004503767.1| PREDICTED: RNA-binding protein NOB1-like iso... 114 2e-23
ref|XP_004503766.1| PREDICTED: RNA-binding protein NOB1-like iso... 114 2e-23
ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus ... 114 2e-23
ref|XP_006352279.1| PREDICTED: RNA-binding protein NOB1-like [So... 113 3e-23
ref|XP_004244609.1| PREDICTED: uncharacterized protein LOC101252... 113 3e-23
ref|XP_002303575.1| hypothetical protein POPTR_0003s12480g [Popu... 112 5e-23
>ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera]
Length = 633
Score = 121 bits (304), Expect = 8e-26
Identities = 57/76 (75%), Positives = 71/76 (93%)
Frame = -2
Query: 229 CKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTIETM 50
CKSSKG+S+AVVDA AIIQGGE+L+ AD+FVSV+EVI+E+RDP SRH+L+ +PFTI+TM
Sbjct: 40 CKSSKGISIAVVDATAIIQGGEQLTRCADKFVSVSEVIDEVRDPVSRHKLAFVPFTIDTM 99
Query: 49 EPSPESLKKVVSFARA 2
EPSPESLKKV++FARA
Sbjct: 100 EPSPESLKKVINFARA 115
>emb|CBI34688.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 121 bits (304), Expect = 8e-26
Identities = 57/76 (75%), Positives = 71/76 (93%)
Frame = -2
Query: 229 CKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTIETM 50
CKSSKG+S+AVVDA AIIQGGE+L+ AD+FVSV+EVI+E+RDP SRH+L+ +PFTI+TM
Sbjct: 52 CKSSKGISIAVVDATAIIQGGEQLTRCADKFVSVSEVIDEVRDPVSRHKLAFVPFTIDTM 111
Query: 49 EPSPESLKKVVSFARA 2
EPSPESLKKV++FARA
Sbjct: 112 EPSPESLKKVINFARA 127
>ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like
[Cucumis sativus]
Length = 617
Score = 121 bits (303), Expect = 1e-25
Identities = 57/78 (73%), Positives = 71/78 (91%)
Frame = -2
Query: 235 DGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTIE 56
D CKSSKGV+VAVVDANAIIQGG++LSS AD+FVSV EV++EIRDP SRHRL+ +PFT+E
Sbjct: 36 DSCKSSKGVAVAVVDANAIIQGGDKLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLE 95
Query: 55 TMEPSPESLKKVVSFARA 2
+M+PSP++L KV+ FARA
Sbjct: 96 SMDPSPDALNKVIKFARA 113
>ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus]
Length = 617
Score = 121 bits (303), Expect = 1e-25
Identities = 57/78 (73%), Positives = 71/78 (91%)
Frame = -2
Query: 235 DGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTIE 56
D CKSSKGV+VAVVDANAIIQGG++LSS AD+FVSV EV++EIRDP SRHRL+ +PFT+E
Sbjct: 36 DSCKSSKGVAVAVVDANAIIQGGDKLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLE 95
Query: 55 TMEPSPESLKKVVSFARA 2
+M+PSP++L KV+ FARA
Sbjct: 96 SMDPSPDALNKVIKFARA 113
>ref|XP_006837051.1| hypothetical protein AMTR_s00110p00064100 [Amborella trichopoda]
gi|548839644|gb|ERM99904.1| hypothetical protein
AMTR_s00110p00064100 [Amborella trichopoda]
Length = 616
Score = 120 bits (300), Expect = 2e-25
Identities = 55/79 (69%), Positives = 70/79 (88%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
+L+ CKSSKG+S+AV+DANA+I GGE+LS+ A++FVS+ E + EIRDP SRH++S LPFT
Sbjct: 29 VLEDCKSSKGISIAVIDANAMISGGEKLSNCAEKFVSIKEALEEIRDPVSRHKISFLPFT 88
Query: 61 IETMEPSPESLKKVVSFAR 5
+ETMEPS ESLKKVVSFAR
Sbjct: 89 VETMEPSEESLKKVVSFAR 107
>ref|XP_002868608.1| hypothetical protein ARALYDRAFT_493857 [Arabidopsis lyrata subsp.
lyrata] gi|297314444|gb|EFH44867.1| hypothetical protein
ARALYDRAFT_493857 [Arabidopsis lyrata subsp. lyrata]
Length = 599
Score = 120 bits (300), Expect = 2e-25
Identities = 58/105 (55%), Positives = 76/105 (72%)
Frame = -2
Query: 316 WSSVLXXXXXXXXXXXXXXXXXXXQILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRF 137
WSS++ ++ CKS+KG+S+AVVDANA+I+GG+ L++FADRF
Sbjct: 9 WSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISMAVVDANAVIEGGQSLTNFADRF 68
Query: 136 VSVAEVINEIRDPTSRHRLSVLPFTIETMEPSPESLKKVVSFARA 2
V+V EV++EIRDP SR RLS +PFTI+TMEPSPESL KV+ FARA
Sbjct: 69 VTVPEVLSEIRDPASRRRLSFIPFTIDTMEPSPESLSKVIKFARA 113
>emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera]
Length = 621
Score = 119 bits (298), Expect = 4e-25
Identities = 56/76 (73%), Positives = 70/76 (92%)
Frame = -2
Query: 229 CKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTIETM 50
CKSSKG+S+AVVDA AIIQGGE+L+ AD+FVSV+EVI+E+RDP S H+L+ +PFTI+TM
Sbjct: 40 CKSSKGISIAVVDATAIIQGGEQLTRCADKFVSVSEVIDEVRDPVSXHKLAFVPFTIDTM 99
Query: 49 EPSPESLKKVVSFARA 2
EPSPESLKKV++FARA
Sbjct: 100 EPSPESLKKVINFARA 115
>ref|XP_004300199.1| PREDICTED: uncharacterized protein LOC101295525 [Fragaria vesca
subsp. vesca]
Length = 630
Score = 118 bits (295), Expect = 9e-25
Identities = 56/80 (70%), Positives = 70/80 (87%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
+++ CKSSKG++VAVVDANAIIQGGE L+ AD+FVSV EV+ EIRDP SRHRL+V+PF
Sbjct: 50 LVESCKSSKGIAVAVVDANAIIQGGETLAHCADKFVSVPEVMAEIRDPISRHRLAVVPFQ 109
Query: 61 IETMEPSPESLKKVVSFARA 2
++TMEPSP+SL KV+ FARA
Sbjct: 110 VQTMEPSPDSLNKVIKFARA 129
>ref|XP_006283208.1| hypothetical protein CARUB_v10004239mg [Capsella rubella]
gi|482551913|gb|EOA16106.1| hypothetical protein
CARUB_v10004239mg [Capsella rubella]
Length = 723
Score = 117 bits (294), Expect = 1e-24
Identities = 56/105 (53%), Positives = 76/105 (72%)
Frame = -2
Query: 316 WSSVLXXXXXXXXXXXXXXXXXXXQILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRF 137
WSS++ ++ CKS+KG+S+AVVDANA+I+GG+ L++FAD+F
Sbjct: 121 WSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISLAVVDANAVIEGGQSLTNFADKF 180
Query: 136 VSVAEVINEIRDPTSRHRLSVLPFTIETMEPSPESLKKVVSFARA 2
V+V EV++EIRDP SR RL+ +PFTI+TMEPSPESL KV+ FARA
Sbjct: 181 VTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARA 225
>ref|XP_006344899.1| PREDICTED: RNA-binding protein NOB1-like [Solanum tuberosum]
Length = 645
Score = 116 bits (291), Expect = 3e-24
Identities = 54/80 (67%), Positives = 70/80 (87%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
++ CKS+KG++VAVVD NAIIQGG++L+ ADRFVS+ EV++EIRDP SR L+ LPFT
Sbjct: 56 LVGSCKSTKGIAVAVVDTNAIIQGGDKLNHSADRFVSIPEVLSEIRDPNSRRSLNFLPFT 115
Query: 61 IETMEPSPESLKKVVSFARA 2
++TMEPSP+SLKKV+SFARA
Sbjct: 116 VDTMEPSPDSLKKVISFARA 135
>gb|EXB37378.1| hypothetical protein L484_024306 [Morus notabilis]
Length = 595
Score = 116 bits (290), Expect = 3e-24
Identities = 53/78 (67%), Positives = 69/78 (88%)
Frame = -2
Query: 235 DGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTIE 56
+ CKS+KG++VAVVDANAII GGERLS AD+FVSV EV++E+RDP SRHRL+ +PF+++
Sbjct: 41 ESCKSTKGIAVAVVDANAIIDGGERLSQCADKFVSVPEVMDEVRDPVSRHRLAFIPFSVQ 100
Query: 55 TMEPSPESLKKVVSFARA 2
++EPSPESL KV+ FARA
Sbjct: 101 SIEPSPESLNKVIKFARA 118
>dbj|BAD43281.1| unknown protein [Arabidopsis thaliana]
Length = 602
Score = 115 bits (289), Expect = 5e-24
Identities = 56/105 (53%), Positives = 75/105 (71%)
Frame = -2
Query: 316 WSSVLXXXXXXXXXXXXXXXXXXXQILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRF 137
WSS++ ++ CKS+KG+S+AVVDANAII+G + L++FAD+F
Sbjct: 9 WSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLTNFADKF 68
Query: 136 VSVAEVINEIRDPTSRHRLSVLPFTIETMEPSPESLKKVVSFARA 2
V+V EV++EIRDP SR RL+ +PFTI+TMEPSPESL KV+ FARA
Sbjct: 69 VTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARA 113
>ref|NP_198935.1| RNA-binding protein NOB1 [Arabidopsis thaliana]
gi|9759165|dbj|BAB09721.1| unnamed protein product
[Arabidopsis thaliana] gi|332007269|gb|AED94652.1|
RNA-binding protein NOB1 [Arabidopsis thaliana]
Length = 602
Score = 115 bits (289), Expect = 5e-24
Identities = 56/105 (53%), Positives = 75/105 (71%)
Frame = -2
Query: 316 WSSVLXXXXXXXXXXXXXXXXXXXQILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRF 137
WSS++ ++ CKS+KG+S+AVVDANAII+G + L++FAD+F
Sbjct: 9 WSSIVKKDPPSKPPVNDGAPAAILGMVGNCKSTKGISIAVVDANAIIEGRQSLTNFADKF 68
Query: 136 VSVAEVINEIRDPTSRHRLSVLPFTIETMEPSPESLKKVVSFARA 2
V+V EV++EIRDP SR RL+ +PFTI+TMEPSPESL KV+ FARA
Sbjct: 69 VTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARA 113
>gb|EMJ10258.1| hypothetical protein PRUPE_ppa016934mg [Prunus persica]
Length = 656
Score = 115 bits (288), Expect = 6e-24
Identities = 53/80 (66%), Positives = 69/80 (86%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
+++ CKSSKG+++AVVDANAIIQGGE LS AD+ VSV EV++E+RDP SRHRL+ +PF
Sbjct: 61 LVESCKSSKGIAIAVVDANAIIQGGESLSHRADKLVSVPEVMDEVRDPVSRHRLAFVPFQ 120
Query: 61 IETMEPSPESLKKVVSFARA 2
++TMEPSPE+L KV+ FARA
Sbjct: 121 VQTMEPSPEALNKVIKFARA 140
>ref|XP_004503767.1| PREDICTED: RNA-binding protein NOB1-like isoform X2 [Cicer
arietinum]
Length = 632
Score = 114 bits (284), Expect = 2e-23
Identities = 56/79 (70%), Positives = 65/79 (82%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
IL+ ++ G+SVA+VDANA+IQ GE L S AD+FVSV EVI EIRDP SRHRLS LPFT
Sbjct: 36 ILEDTRNRHGISVAIVDANAVIQSGETLHSLADKFVSVPEVIEEIRDPVSRHRLSFLPFT 95
Query: 61 IETMEPSPESLKKVVSFAR 5
I+TMEPSPES+ KVV FAR
Sbjct: 96 IQTMEPSPESINKVVKFAR 114
>ref|XP_004503766.1| PREDICTED: RNA-binding protein NOB1-like isoform X1 [Cicer
arietinum]
Length = 631
Score = 114 bits (284), Expect = 2e-23
Identities = 56/79 (70%), Positives = 65/79 (82%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
IL+ ++ G+SVA+VDANA+IQ GE L S AD+FVSV EVI EIRDP SRHRLS LPFT
Sbjct: 36 ILEDTRNRHGISVAIVDANAVIQSGETLHSLADKFVSVPEVIEEIRDPVSRHRLSFLPFT 95
Query: 61 IETMEPSPESLKKVVSFAR 5
I+TMEPSPES+ KVV FAR
Sbjct: 96 IQTMEPSPESINKVVKFAR 114
>ref|XP_002509778.1| RNA-binding protein nob1, putative [Ricinus communis]
gi|223549677|gb|EEF51165.1| RNA-binding protein nob1,
putative [Ricinus communis]
Length = 628
Score = 114 bits (284), Expect = 2e-23
Identities = 56/120 (46%), Positives = 82/120 (68%)
Frame = -2
Query: 361 SSSPSFKLATMGATSWSSVLXXXXXXXXXXXXXXXXXXXQILDGCKSSKGVSVAVVDANA 182
S SPS ++ ++ WS+++ ++ CKSSKG+S+AV+DANA
Sbjct: 4 SQSPS---SSAQSSCWSNIVKNPPQQPNNQNPSPNPTNQIFVESCKSSKGISMAVIDANA 60
Query: 181 IIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTIETMEPSPESLKKVVSFARA 2
+I+GGE+L + AD+FV+V EV+ EIRDP SRHRLS +PFTI+++EPS ++L KV+ FARA
Sbjct: 61 VIEGGEKLHNLADKFVTVPEVLAEIRDPVSRHRLSFVPFTIDSLEPSTDALNKVIKFARA 120
>ref|XP_006352279.1| PREDICTED: RNA-binding protein NOB1-like [Solanum tuberosum]
Length = 647
Score = 113 bits (282), Expect = 3e-23
Identities = 54/79 (68%), Positives = 69/79 (87%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
++ CKS+KG++VAVVDANAIIQGG++L+ ADRFV+V EV+ EIRD SRH L++LPFT
Sbjct: 57 LVGSCKSTKGIAVAVVDANAIIQGGDKLNHSADRFVTVPEVLAEIRDRNSRHSLNLLPFT 116
Query: 61 IETMEPSPESLKKVVSFAR 5
I+T EPSP+SLKKV+SFAR
Sbjct: 117 IDTTEPSPDSLKKVISFAR 135
>ref|XP_004244609.1| PREDICTED: uncharacterized protein LOC101252008 [Solanum
lycopersicum]
Length = 647
Score = 113 bits (282), Expect = 3e-23
Identities = 54/80 (67%), Positives = 70/80 (87%)
Frame = -2
Query: 241 ILDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFT 62
++ CKS+KG++VAVVDANAIIQGG++L+ ADRFV+V EV+ EIRD SRH L++LPFT
Sbjct: 57 MVGSCKSTKGIAVAVVDANAIIQGGDKLNHSADRFVTVPEVLAEIRDRNSRHSLNLLPFT 116
Query: 61 IETMEPSPESLKKVVSFARA 2
I+T EPSP+SLKKV+SFAR+
Sbjct: 117 IDTTEPSPDSLKKVISFARS 136
>ref|XP_002303575.1| hypothetical protein POPTR_0003s12480g [Populus trichocarpa]
gi|222841007|gb|EEE78554.1| hypothetical protein
POPTR_0003s12480g [Populus trichocarpa]
Length = 588
Score = 112 bits (280), Expect = 5e-23
Identities = 51/79 (64%), Positives = 68/79 (86%)
Frame = -2
Query: 238 LDGCKSSKGVSVAVVDANAIIQGGERLSSFADRFVSVAEVINEIRDPTSRHRLSVLPFTI 59
++ CKS+ G+SVAV+DANAIIQGGE+L++FAD+F +V EV+ EIRDP SRHRL+ +PF+I
Sbjct: 40 VESCKSTHGISVAVIDANAIIQGGEKLNNFADKFFTVPEVLAEIRDPVSRHRLAFIPFSI 99
Query: 58 ETMEPSPESLKKVVSFARA 2
+ EPSP+SL KV+ FARA
Sbjct: 100 DCREPSPDSLNKVIKFARA 118