BLASTX nr result
ID: Rheum21_contig00009502
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009502
(911 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233569.1| PREDICTED: uncharacterized protein LOC101255... 76 2e-11
ref|XP_004233568.1| PREDICTED: uncharacterized protein LOC101255... 76 2e-11
ref|XP_006361949.1| PREDICTED: uncharacterized HTH La-type RNA-b... 74 6e-11
ref|XP_006361948.1| PREDICTED: uncharacterized HTH La-type RNA-b... 74 6e-11
emb|CBI22123.3| unnamed protein product [Vitis vinifera] 71 6e-10
emb|CAN73670.1| hypothetical protein VITISV_031857 [Vitis vinifera] 70 8e-10
gb|EMJ05519.1| hypothetical protein PRUPE_ppa003845mg [Prunus pe... 70 1e-09
ref|XP_006361946.1| PREDICTED: la-related protein-like [Solanum ... 66 2e-08
ref|XP_004134846.1| PREDICTED: uncharacterized protein LOC101218... 60 1e-06
ref|XP_006473702.1| PREDICTED: protein enabled homolog [Citrus s... 60 1e-06
ref|XP_004292934.1| PREDICTED: uncharacterized protein LOC101305... 59 2e-06
ref|XP_006361945.1| PREDICTED: la-related protein-like [Solanum ... 59 3e-06
ref|XP_006412048.1| hypothetical protein EUTSA_v10024905mg [Eutr... 59 3e-06
ref|XP_006435232.1| hypothetical protein CICLE_v10000767mg [Citr... 58 6e-06
ref|XP_006435231.1| hypothetical protein CICLE_v10000767mg [Citr... 58 6e-06
ref|XP_006435230.1| hypothetical protein CICLE_v10000767mg [Citr... 58 6e-06
ref|XP_004165604.1| PREDICTED: uncharacterized LOC101218903 [Cuc... 57 7e-06
ref|XP_002869052.1| La domain-containing protein [Arabidopsis ly... 57 7e-06
ref|XP_002531141.1| lupus la ribonucleoprotein, putative [Ricinu... 57 7e-06
>ref|XP_004233569.1| PREDICTED: uncharacterized protein LOC101255266 isoform 2 [Solanum
lycopersicum]
Length = 563
Score = 75.9 bits (185), Expect = 2e-11
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 518 GKAGS-STEVSEAEAQPEGSENGNGSRKNTWNKQYNAALESGLVIGAVSWPTLSESTKGS 694
G A S S E + + Q E N NG++K WNK N A + V+GAVSWP LS+STK S
Sbjct: 94 GNASSLSPEDAAIDTQIESDTNSNGAKKPAWNKPSNGAADVSPVMGAVSWPALSDSTKAS 153
Query: 695 PKPPSADSLKNPNDSPISEPQ 757
PK PS+DSLK+ +D +S Q
Sbjct: 154 PKLPSSDSLKSLSDGSVSVTQ 174
>ref|XP_004233568.1| PREDICTED: uncharacterized protein LOC101255266 isoform 1 [Solanum
lycopersicum]
Length = 570
Score = 75.9 bits (185), Expect = 2e-11
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 518 GKAGS-STEVSEAEAQPEGSENGNGSRKNTWNKQYNAALESGLVIGAVSWPTLSESTKGS 694
G A S S E + + Q E N NG++K WNK N A + V+GAVSWP LS+STK S
Sbjct: 94 GNASSLSPEDAAIDTQIESDTNSNGAKKPAWNKPSNGAADVSPVMGAVSWPALSDSTKAS 153
Query: 695 PKPPSADSLKNPNDSPISEPQ 757
PK PS+DSLK+ +D +S Q
Sbjct: 154 PKLPSSDSLKSLSDGSVSVTQ 174
>ref|XP_006361949.1| PREDICTED: uncharacterized HTH La-type RNA-binding protein
C1527.03-like isoform X2 [Solanum tuberosum]
Length = 561
Score = 74.3 bits (181), Expect = 6e-11
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 533 STEVSEAEAQPEGSENGNGSRKNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPKPPSA 712
S E + + Q E N NG++K WNK N A + V+GAVSWP LS+STK SPK PS+
Sbjct: 100 SPEDAAIDTQLESDTNSNGAKKPAWNKPSNGAADVSPVMGAVSWPALSDSTKASPKLPSS 159
Query: 713 DSLKNPNDSPIS 748
DSLK+ +D +S
Sbjct: 160 DSLKSLSDGSVS 171
>ref|XP_006361948.1| PREDICTED: uncharacterized HTH La-type RNA-binding protein
C1527.03-like isoform X1 [Solanum tuberosum]
Length = 570
Score = 74.3 bits (181), Expect = 6e-11
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +2
Query: 533 STEVSEAEAQPEGSENGNGSRKNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPKPPSA 712
S E + + Q E N NG++K WNK N A + V+GAVSWP LS+STK SPK PS+
Sbjct: 100 SPEDAAIDTQLESDTNSNGAKKPAWNKPSNGAADVSPVMGAVSWPALSDSTKASPKLPSS 159
Query: 713 DSLKNPNDSPIS 748
DSLK+ +D +S
Sbjct: 160 DSLKSLSDGSVS 171
>emb|CBI22123.3| unnamed protein product [Vitis vinifera]
Length = 568
Score = 70.9 bits (172), Expect = 6e-10
Identities = 39/77 (50%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Frame = +2
Query: 530 SSTEVSEAEAQPEGSENGNGS--RKNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPKP 703
S + S+ EAQ E S+NGNG+ ++ WNK N E G V+GA SWP LSES + S K
Sbjct: 84 SPEDSSQVEAQLESSDNGNGNAGKRPAWNKPSNGVAEVGPVMGASSWPALSESARASAKS 143
Query: 704 PSADSLKNPNDSPISEP 754
S DSLK+P D IS P
Sbjct: 144 AS-DSLKSPTDGSISTP 159
>emb|CAN73670.1| hypothetical protein VITISV_031857 [Vitis vinifera]
Length = 404
Score = 70.5 bits (171), Expect = 8e-10
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Frame = +2
Query: 530 SSTEVSEAEAQPEGSENGNGS--RKNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPKP 703
S + S+ EAQ E S+NGNG+ ++ WNK N E G V+GA SWP LSES + S K
Sbjct: 84 SPEDSSQVEAQLESSDNGNGNAGKRPAWNKPSNGVAEVGPVMGASSWPALSESARASAKS 143
Query: 704 PSADSLKNPNDSPISEP 754
S DSLK P D IS P
Sbjct: 144 AS-DSLKGPTDGSISTP 159
>gb|EMJ05519.1| hypothetical protein PRUPE_ppa003845mg [Prunus persica]
Length = 544
Score = 69.7 bits (169), Expect = 1e-09
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Frame = +2
Query: 503 SSSGQGKAGSSTEVSEAEAQP------EGSENGNGSRKNTWNKQYNAALESGLVIGAVSW 664
SSS Q ++ S+ + + + P EGSENGN ++ WNK N A+E G V+GAVSW
Sbjct: 88 SSSSQSQSNSAPQSNSSSPPPAEESVGEGSENGNAGKRPAWNKPSNGAIEVGPVMGAVSW 147
Query: 665 PTLSESTKGSPKPPSADSLKNPNDSPIS 748
P LSES + S K S + LK ++ P+S
Sbjct: 148 PALSESARASTK-LSPEPLKGVSEPPLS 174
>ref|XP_006361946.1| PREDICTED: la-related protein-like [Solanum tuberosum]
Length = 567
Score = 65.9 bits (159), Expect = 2e-08
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Frame = +2
Query: 497 EVSSSGQGKAGSSTEVSEAEAQPEGSE---NGNGSRKNTWNKQYNAALESGLVIGAVSWP 667
+V+++ + +T ++ E GS NGNG++K WNK N A + V+GAVSWP
Sbjct: 84 QVATADSASSLDATTEAQIENSDNGSSDGTNGNGAKKQAWNKPSNGAADLSPVMGAVSWP 143
Query: 668 TLSESTKGSPK--PPSADSLKNPNDS 739
LS+STK SPK S+D LK P+ S
Sbjct: 144 ALSDSTKASPKLSSSSSDLLKTPSRS 169
>ref|XP_004134846.1| PREDICTED: uncharacterized protein LOC101218903 [Cucumis sativus]
Length = 529
Score = 60.1 bits (144), Expect = 1e-06
Identities = 39/95 (41%), Positives = 50/95 (52%)
Frame = +2
Query: 452 SSESLATALVPEFGYEVSSSGQGKAGSSTEVSEAEAQPEGSENGNGSRKNTWNKQYNAAL 631
SS + TA+V + SSS + G S + N +K WNK N
Sbjct: 68 SSSASPTAVVEPVSFFSSSSSEEPVGESYDGGNGST-------ANAGKKPAWNKLANGT- 119
Query: 632 ESGLVIGAVSWPTLSESTKGSPKPPSADSLKNPND 736
E+G V+GAVSWP LSES KG+PK S+DSLK+ D
Sbjct: 120 EAGPVMGAVSWPALSESAKGTPK-SSSDSLKSLGD 153
>ref|XP_006473702.1| PREDICTED: protein enabled homolog [Citrus sinensis]
Length = 547
Score = 59.7 bits (143), Expect = 1e-06
Identities = 42/95 (44%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Frame = +2
Query: 455 SESLATALVPEFGYEVSSSGQGKAGSSTEVSEAEAQP-----EGSENGNGSR--KNTWNK 613
S L T +PE VS S KA +S S P ++ GN +R K WNK
Sbjct: 61 SPPLTTTSLPEPTGSVSPS---KAVASAPSSPPPDNPIAAGSSDADKGNAARPKKLAWNK 117
Query: 614 QYNAALESGLVIGAVSWPTLSESTKGSPKPPSADS 718
N +E G V+GA SWP LSESTK SPK SADS
Sbjct: 118 PSNGVVEVGPVMGAASWPALSESTKPSPKSSSADS 152
>ref|XP_004292934.1| PREDICTED: uncharacterized protein LOC101305142 [Fragaria vesca
subsp. vesca]
Length = 556
Score = 59.3 bits (142), Expect = 2e-06
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 551 AEAQPEGSENGNGSR--KNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPKPPSADSLK 724
A A+ +NGN +R K WNK A+E G V+GAV+WP LSES + SPK P+ S K
Sbjct: 92 AAAESADGQNGNAARGKKPAWNKPSKDAVEVGPVMGAVAWPALSESARASPKLPADSSSK 151
Query: 725 NPNDSPISEP 754
D + P
Sbjct: 152 TVTDVSVPPP 161
>ref|XP_006361945.1| PREDICTED: la-related protein-like [Solanum tuberosum]
Length = 501
Score = 58.5 bits (140), Expect = 3e-06
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 566 EGSENGNGSRKNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPK-PPSADSLKNPNDSP 742
E N NG++K WNK N A + V+GA+SWP LS+STK S K S+DSL+ +
Sbjct: 67 ESDTNSNGAKKTVWNKPSNGAADVSPVMGALSWPALSDSTKASFKSSSSSDSLRTLPNGS 126
Query: 743 ISEPQ 757
+SE Q
Sbjct: 127 VSETQ 131
>ref|XP_006412048.1| hypothetical protein EUTSA_v10024905mg [Eutrema salsugineum]
gi|557113218|gb|ESQ53501.1| hypothetical protein
EUTSA_v10024905mg [Eutrema salsugineum]
Length = 525
Score = 58.5 bits (140), Expect = 3e-06
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 500 VSSSGQGKAGSSTEVSEAEAQPEGSENG---NGSRKNTWNKQYNAALESGLVIGAVSWPT 670
++S S V A + E+G N +K W + N A E G V+GA SWP
Sbjct: 76 IASVSVAPPASLLTVEAAAGDDKSEESGGQSNAGKKPVWKRPSNGASEVGPVMGASSWPA 135
Query: 671 LSESTKGSPKPPSADSLKNPNDSPISEP 754
L+E+TK S+DSLK+ D P+S P
Sbjct: 136 LNEATKAPSNKSSSDSLKSLGDVPVSSP 163
>ref|XP_006435232.1| hypothetical protein CICLE_v10000767mg [Citrus clementina]
gi|557537354|gb|ESR48472.1| hypothetical protein
CICLE_v10000767mg [Citrus clementina]
Length = 547
Score = 57.8 bits (138), Expect = 6e-06
Identities = 38/96 (39%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +2
Query: 482 PEFGYEVSSSGQGKAGSSTEVSEAEAQPEGSENGNGSR--KNTWNKQYNAALESGLVIGA 655
P G S + S + A ++ GN +R K WNK N +E G V+GA
Sbjct: 72 PTGGVSPSKAVASAPSSPPPDNPIAAGSSDADKGNAARPKKLAWNKPSNGVVEVGPVMGA 131
Query: 656 VSWPTLSESTKGSPKPPSAD--SLKNPNDSPISEPQ 757
SWP LSESTK SPK SAD S K+ D +S Q
Sbjct: 132 ASWPALSESTKPSPKSSSADSSSSKSVADGSVSGTQ 167
>ref|XP_006435231.1| hypothetical protein CICLE_v10000767mg [Citrus clementina]
gi|557537353|gb|ESR48471.1| hypothetical protein
CICLE_v10000767mg [Citrus clementina]
Length = 538
Score = 57.8 bits (138), Expect = 6e-06
Identities = 38/96 (39%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +2
Query: 482 PEFGYEVSSSGQGKAGSSTEVSEAEAQPEGSENGNGSR--KNTWNKQYNAALESGLVIGA 655
P G S + S + A ++ GN +R K WNK N +E G V+GA
Sbjct: 72 PTGGVSPSKAVASAPSSPPPDNPIAAGSSDADKGNAARPKKLAWNKPSNGVVEVGPVMGA 131
Query: 656 VSWPTLSESTKGSPKPPSAD--SLKNPNDSPISEPQ 757
SWP LSESTK SPK SAD S K+ D +S Q
Sbjct: 132 ASWPALSESTKPSPKSSSADSSSSKSVADGSVSGTQ 167
>ref|XP_006435230.1| hypothetical protein CICLE_v10000767mg [Citrus clementina]
gi|557537352|gb|ESR48470.1| hypothetical protein
CICLE_v10000767mg [Citrus clementina]
Length = 458
Score = 57.8 bits (138), Expect = 6e-06
Identities = 38/96 (39%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +2
Query: 482 PEFGYEVSSSGQGKAGSSTEVSEAEAQPEGSENGNGSR--KNTWNKQYNAALESGLVIGA 655
P G S + S + A ++ GN +R K WNK N +E G V+GA
Sbjct: 72 PTGGVSPSKAVASAPSSPPPDNPIAAGSSDADKGNAARPKKLAWNKPSNGVVEVGPVMGA 131
Query: 656 VSWPTLSESTKGSPKPPSAD--SLKNPNDSPISEPQ 757
SWP LSESTK SPK SAD S K+ D +S Q
Sbjct: 132 ASWPALSESTKPSPKSSSADSSSSKSVADGSVSGTQ 167
>ref|XP_004165604.1| PREDICTED: uncharacterized LOC101218903 [Cucumis sativus]
Length = 529
Score = 57.4 bits (137), Expect = 7e-06
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Frame = +2
Query: 545 SEAEAQPEGSENGNGS-----RKNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPKPPS 709
S E E + GNGS +K WNK N E+G V+GAVSWP LSES KG+PK S
Sbjct: 87 SSEEPVGESYDGGNGSTANAGKKPAWNKLANGT-EAGPVMGAVSWPALSESAKGTPK-SS 144
Query: 710 ADSLKNPND 736
+DSLK+ D
Sbjct: 145 SDSLKSLGD 153
>ref|XP_002869052.1| La domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297314888|gb|EFH45311.1| La domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 526
Score = 57.4 bits (137), Expect = 7e-06
Identities = 29/65 (44%), Positives = 35/65 (53%)
Frame = +2
Query: 554 EAQPEGSENGNGSRKNTWNKQYNAALESGLVIGAVSWPTLSESTKGSPKPPSADSLKNPN 733
E E GN +K W + N A E G V+GA SWP LSE+TK S+DSLK+
Sbjct: 99 EKSEESGGQGNAGKKPVWKRPSNGASEVGPVMGASSWPALSETTKAPSNKSSSDSLKSLG 158
Query: 734 DSPIS 748
D P S
Sbjct: 159 DVPSS 163
>ref|XP_002531141.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223529254|gb|EEF31226.1| lupus la ribonucleoprotein,
putative [Ricinus communis]
Length = 471
Score = 57.4 bits (137), Expect = 7e-06
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 452 SSESLATALVPEFGYEVSSSGQGKAGSSTEVSEAEAQPEGSENG-NGSRKNTWNKQYNAA 628
S +++AT VS + + + S V E EG++NG N ++ WNK N A
Sbjct: 62 SLDAIATPAGAIAAAPVSPTREAVSEQSVVVEE-----EGTDNGANAGKRPVWNKPSNGA 116
Query: 629 LESGLVIGAVSWPTLSESTKGSPKPPSAD 715
+E G V+GAVSWP LSES + S KP D
Sbjct: 117 VEVGAVMGAVSWPALSESARVSGKPSQQD 145