BLASTX nr result

ID: Rheum21_contig00008954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00008954
         (657 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829835.1| hypothetical protein AMTR_s00119p00099150 [A...    42   3e-07
ref|XP_004491816.1| PREDICTED: cyclic dof factor 2-like [Cicer a...    41   3e-07

>ref|XP_006829835.1| hypothetical protein AMTR_s00119p00099150 [Amborella trichopoda]
           gi|548835416|gb|ERM97251.1| hypothetical protein
           AMTR_s00119p00099150 [Amborella trichopoda]
          Length = 515

 Score = 41.6 bits (96), Expect(2) = 3e-07
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 602 LKKPDKIVPCPRCNSMDT 655
           LKKPDK++PCPRCNS+DT
Sbjct: 114 LKKPDKVLPCPRCNSLDT 131



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 25/76 (32%), Positives = 37/76 (48%)
 Frame = +3

Query: 264 MSEAKDPGIKLFGKTIQLASNDDVSHAVEVVVLDCEQSSCDHNSNCLSCSNDSVSPTSLF 443
           M E KDP IKLFGKTI L  N+ +S +++    D  Q++ D    C   +  S       
Sbjct: 1   MLEVKDPAIKLFGKTIPLLENNFLSDSID--KSDDIQATSDEKETCQENNEASGDKAGAN 58

Query: 444 DKNSASGEGSTDSKQE 491
            ++ AS     + K+E
Sbjct: 59  TEDPASPNDLKECKEE 74


>ref|XP_004491816.1| PREDICTED: cyclic dof factor 2-like [Cicer arietinum]
          Length = 493

 Score = 41.2 bits (95), Expect(2) = 3e-07
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = +2

Query: 602 LKKPDKIVPCPRCNSMDT 655
           LKKPDKI+PCPRC+SMDT
Sbjct: 123 LKKPDKILPCPRCSSMDT 140



 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = +3

Query: 264 MSEAKDPGIKLFGKTIQLASNDDVSHAVEVVVLDCEQSSCDHN-SNCLSCSNDSVSPTSL 440
           MSE KDP IKLFGKTI +   D +     +   D    S D N  + ++ S D      +
Sbjct: 1   MSETKDPAIKLFGKTIPVP--DILVGTPALSSGDVVDESIDQNHDSSINSSKDEQEQEIV 58

Query: 441 FDKNSASGEGSTDSKQEDGXCWKNKRGVKT 530
            D     G+  TD K+EDG   K+     T
Sbjct: 59  MD---TLGDKPTDGKKEDGVPTKSSEEFST 85


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