BLASTX nr result
ID: Rheum21_contig00007848
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00007848
(815 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [A... 120 8e-25
emb|CBI26179.3| unnamed protein product [Vitis vinifera] 119 1e-24
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro... 114 5e-23
ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chro... 112 2e-22
ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-conta... 108 3e-21
ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-conta... 107 4e-21
ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein ... 107 5e-21
gb|ESW26127.1| hypothetical protein PHAVU_003G093200g [Phaseolus... 103 6e-20
ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citr... 100 5e-19
ref|XP_006400458.1| hypothetical protein EUTSA_v10014796mg [Eutr... 97 7e-18
ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp.... 96 2e-17
ref|XP_006286393.1| hypothetical protein CARUB_v10002089mg [Caps... 95 3e-17
ref|NP_197404.2| RNA recognition motif-containing protein [Arabi... 94 6e-17
ref|XP_004293785.1| PREDICTED: multiple RNA-binding domain-conta... 85 3e-14
ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitoch... 84 5e-14
gb|EXB66987.1| Glycine-rich RNA-binding protein 2 [Morus notabilis] 84 8e-14
gb|EOX96861.1| RNA-binding (RRM/RBD/RNP motifs) family protein, ... 83 1e-13
ref|XP_002318331.1| RNA recognition motif-containing family prot... 83 1e-13
gb|EOY05517.1| CBS domain-containing protein with a domain of Un... 82 3e-13
gb|ABK21345.1| unknown [Picea sitchensis] gi|224285462|gb|ACN404... 81 5e-13
>ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
gi|548854453|gb|ERN12363.1| hypothetical protein
AMTR_s00025p00095750 [Amborella trichopoda]
Length = 121
Score = 120 bits (300), Expect = 8e-25
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = -1
Query: 461 DEFSRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDA 282
D+ R+FIKGLS ST+EG L +AFSQFG+V VKV+ D +K+SLGFAY+ F+ EEDA
Sbjct: 24 DDSPSTRVFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFAYIWFTCEEDA 83
Query: 281 QLAIKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
+LA+K+MDGKFF+GRF++VT A P T + KA PY+F
Sbjct: 84 KLAVKKMDGKFFDGRFVHVTMAWPETLSNKRKATPYRF 121
>emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 119 bits (299), Expect = 1e-24
Identities = 59/98 (60%), Positives = 73/98 (74%)
Frame = -1
Query: 461 DEFSRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDA 282
DE S RIFIKGL +ST EGSL+ AFSQFGEV+ V++ + I+ + LGFA+ F+ EE A
Sbjct: 59 DESSSTRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESA 118
Query: 281 QLAIKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
QLA+K MDGKFF GRF++V AKPG +K KA PYKF
Sbjct: 119 QLAVKMMDGKFFHGRFVFVKIAKPGPSKRHVKAAPYKF 156
>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X1 [Solanum tuberosum]
Length = 168
Score = 114 bits (284), Expect = 5e-23
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = -1
Query: 440 IFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLAIKEM 261
IF+KGL+KST EG L+ FSQFG+V+ VK+I D +KESLGFAY+ F + E AQ A++EM
Sbjct: 78 IFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAVQEM 137
Query: 260 DGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
+GKF +GRFI V AKPG+ KL K PYKF
Sbjct: 138 NGKFLDGRFIQVQMAKPGSCKLNIKTMPYKF 168
>ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like [Solanum lycopersicum]
Length = 168
Score = 112 bits (279), Expect = 2e-22
Identities = 56/98 (57%), Positives = 70/98 (71%)
Frame = -1
Query: 461 DEFSRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDA 282
D+ S IF+KGL+KST EG L+ FSQFG V VK++ D +KESLGFAY+ F + E A
Sbjct: 71 DDDSTTIIFLKGLAKSTPEGRLKVVFSQFGNVNRVKIVTDKKSKESLGFAYIWFPDNESA 130
Query: 281 QLAIKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
Q AI+EM+GKF +GRFI V AKPG+ K K+ PYKF
Sbjct: 131 QSAIREMNGKFLDGRFIQVQMAKPGSCKPNVKSMPYKF 168
>ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 157
Score = 108 bits (269), Expect = 3e-21
Identities = 53/95 (55%), Positives = 70/95 (73%)
Frame = -1
Query: 452 SRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLA 273
S +IF+KGL STSEG L FS+FG+V V++ +D + +SLGFAY+ F EE AQLA
Sbjct: 63 SSPKIFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFAYIWFVKEESAQLA 122
Query: 272 IKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
++EM+GKFF+GRFIYVT AKPG++K + YKF
Sbjct: 123 VQEMNGKFFDGRFIYVTIAKPGSSKSSKRTTAYKF 157
>ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X1 [Glycine max]
Length = 160
Score = 107 bits (268), Expect = 4e-21
Identities = 54/95 (56%), Positives = 69/95 (72%)
Frame = -1
Query: 452 SRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLA 273
S +IF+KGL STSEG L FS+FGEV +++ +D + +SLGFAY+ F EE AQLA
Sbjct: 66 SSPKIFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLA 125
Query: 272 IKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
+ EM+GKFF GRFIYVT AKPG++K +A YKF
Sbjct: 126 VLEMNGKFFYGRFIYVTIAKPGSSKSSKRATAYKF 160
>ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 162
Score = 107 bits (267), Expect = 5e-21
Identities = 54/95 (56%), Positives = 67/95 (70%)
Frame = -1
Query: 452 SRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLA 273
S +IFIKGL S SE L FS FGEV VK+++D + +SLGFAY+ F EE AQLA
Sbjct: 68 SSTKIFIKGLPLSISEVRLTKVFSGFGEVTQVKILIDKESGQSLGFAYISFDKEESAQLA 127
Query: 272 IKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
KEM+GKFF+GRFIYV+ AKPG++K + YKF
Sbjct: 128 AKEMNGKFFDGRFIYVSIAKPGSSKSWKRTTAYKF 162
>gb|ESW26127.1| hypothetical protein PHAVU_003G093200g [Phaseolus vulgaris]
Length = 161
Score = 103 bits (258), Expect = 6e-20
Identities = 53/95 (55%), Positives = 68/95 (71%)
Frame = -1
Query: 452 SRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLA 273
S +IF+KGL S SEG L FS+FGEV V++ +D + +SLGFA++ F EE AQLA
Sbjct: 67 SSAKIFVKGLPHSASEGRLMKVFSEFGEVNLVQLPIDEESGQSLGFAFIWFVKEESAQLA 126
Query: 272 IKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
I+EM+GKFF+GRFIYVT AKPG++K YKF
Sbjct: 127 IQEMNGKFFDGRFIYVTIAKPGSSKKLKGTTAYKF 161
>ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citrus clementina]
gi|568872263|ref|XP_006489291.1| PREDICTED:
polyadenylate-binding protein RBP47C'-like isoform X1
[Citrus sinensis] gi|557521678|gb|ESR33045.1|
hypothetical protein CICLE_v10006073mg [Citrus
clementina]
Length = 167
Score = 100 bits (250), Expect = 5e-19
Identities = 50/102 (49%), Positives = 70/102 (68%)
Frame = -1
Query: 473 SLQFDEFSRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSN 294
S + D SR IFIKGL +S +EG ++ AFSQFGEV VK++ + ++K+ LG A++ FS
Sbjct: 66 STESDTSSRTGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSR 125
Query: 293 EEDAQLAIKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
+E A LA++ M+GKFF GRFI V A+ G +K R + YKF
Sbjct: 126 KESADLAVENMNGKFFYGRFILVKIAEAGLSKNRGRRTRYKF 167
>ref|XP_006400458.1| hypothetical protein EUTSA_v10014796mg [Eutrema salsugineum]
gi|557101548|gb|ESQ41911.1| hypothetical protein
EUTSA_v10014796mg [Eutrema salsugineum]
Length = 181
Score = 97.1 bits (240), Expect = 7e-18
Identities = 44/87 (50%), Positives = 67/87 (77%)
Frame = -1
Query: 452 SRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLA 273
S + +F+KGL S SEG LR FS++GEV++VK+I++ T++SLG+ Y+ F+ +EDAQLA
Sbjct: 84 SISSVFVKGLPDSVSEGRLRKVFSEYGEVSNVKIIVNEKTRQSLGYGYVWFNKKEDAQLA 143
Query: 272 IKEMDGKFFEGRFIYVTNAKPGTTKLR 192
++ M+GKFF+GRFI V +PG ++ R
Sbjct: 144 VEAMNGKFFDGRFILVKFGQPGMSRRR 170
>ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319762|gb|EFH50184.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 95.9 bits (237), Expect = 2e-17
Identities = 42/83 (50%), Positives = 64/83 (77%)
Frame = -1
Query: 440 IFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLAIKEM 261
+F+KG S S SEG L+ FS+FG+V +VK+I++ T++SLG+ Y+ F+ +EDAQLA++ M
Sbjct: 77 VFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIINERTRQSLGYGYVWFNRKEDAQLAVEAM 136
Query: 260 DGKFFEGRFIYVTNAKPGTTKLR 192
+GKFF+GRFI V +PG ++ R
Sbjct: 137 NGKFFDGRFILVKFGQPGLSRRR 159
>ref|XP_006286393.1| hypothetical protein CARUB_v10002089mg [Capsella rubella]
gi|482555099|gb|EOA19291.1| hypothetical protein
CARUB_v10002089mg [Capsella rubella]
Length = 177
Score = 95.1 bits (235), Expect = 3e-17
Identities = 43/91 (47%), Positives = 69/91 (75%)
Frame = -1
Query: 440 IFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLAIKEM 261
IF+KG+ S SEG L+ FS+FG+V++VK+I++ T++SLG+ Y+ F+++EDAQLA++ M
Sbjct: 83 IFVKGIPDSVSEGRLKIVFSEFGQVSNVKIIINEKTQQSLGYGYVWFNSKEDAQLAVEAM 142
Query: 260 DGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
+GKFF+GRFI V +PG ++ R + + F
Sbjct: 143 NGKFFDGRFILVKFGQPGLSRHRKPHSGFLF 173
>ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005259|gb|AED92642.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 172
Score = 94.0 bits (232), Expect = 6e-17
Identities = 43/95 (45%), Positives = 68/95 (71%)
Frame = -1
Query: 452 SRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLA 273
S + +F+KG S S SEG L+ FS+FG+V +VK+I + T++SLG+ Y+ F+++EDAQ A
Sbjct: 75 SISSLFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSA 134
Query: 272 IKEMDGKFFEGRFIYVTNAKPGTTKLRAKANPYKF 168
++ M+GKFF+GRFI V +PG ++ R + + F
Sbjct: 135 VEAMNGKFFDGRFILVKFGQPGLSRRRRPHSDFLF 169
>ref|XP_004293785.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform 1 [Fragaria vesca subsp. vesca]
gi|470115191|ref|XP_004293786.1| PREDICTED: multiple
RNA-binding domain-containing protein 1-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 155
Score = 84.7 bits (208), Expect = 3e-14
Identities = 39/80 (48%), Positives = 58/80 (72%)
Frame = -1
Query: 446 NRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLAIK 267
+RI +K + STSE SL+ FS FGE+A VK++ D I+K S GFA++ +++++DA LA++
Sbjct: 46 SRIMVKNIPYSTSENSLQQKFSNFGEIAEVKLVQDEISKRSKGFAFIQYTSQDDAMLALE 105
Query: 266 EMDGKFFEGRFIYVTNAKPG 207
MD + +GR IYV AKPG
Sbjct: 106 NMDRQTLDGRVIYVELAKPG 125
>ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Vitis
vinifera]
Length = 145
Score = 84.3 bits (207), Expect = 5e-14
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = -1
Query: 461 DEFSRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDA 282
DE S RIFIKGL +ST EGSL+ AFSQFGEV+ V++ + I+ + LGFA+ F+ EE A
Sbjct: 59 DESSSTRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESA 118
Query: 281 QLAIKEMDGK 252
QLA+K MDGK
Sbjct: 119 QLAVKMMDGK 128
>gb|EXB66987.1| Glycine-rich RNA-binding protein 2 [Morus notabilis]
Length = 157
Score = 83.6 bits (205), Expect = 8e-14
Identities = 42/86 (48%), Positives = 59/86 (68%)
Frame = -1
Query: 464 FDEFSRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEED 285
FD +RI ++ L STSE SL FS FG++A VK+I D +T+ S GFA++ F++++D
Sbjct: 41 FDYPLASRIIVRNLPYSTSERSLLENFSNFGQIAEVKLIKDKMTRRSKGFAFIQFTSQDD 100
Query: 284 AQLAIKEMDGKFFEGRFIYVTNAKPG 207
A LAI+ MD + +GR IYV AKPG
Sbjct: 101 AMLAIENMDHQNLDGRLIYVEIAKPG 126
>gb|EOX96861.1| RNA-binding (RRM/RBD/RNP motifs) family protein, putative
[Theobroma cacao]
Length = 147
Score = 83.2 bits (204), Expect = 1e-13
Identities = 37/85 (43%), Positives = 60/85 (70%)
Frame = -1
Query: 446 NRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLAIK 267
+RIF++ L +T E SL+ F+ FG++A VK++ D+ TK S G+A++ +++++DA LA++
Sbjct: 37 SRIFVRNLPYTTKESSLQKEFANFGQIAEVKLVKDDFTKRSKGYAFIQYTSQDDAMLAVE 96
Query: 266 EMDGKFFEGRFIYVTNAKPGTTKLR 192
MD + F GR IYV AKPG + R
Sbjct: 97 NMDQQVFGGRPIYVEIAKPGKDRFR 121
>ref|XP_002318331.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222859004|gb|EEE96551.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 181
Score = 82.8 bits (203), Expect = 1e-13
Identities = 43/101 (42%), Positives = 64/101 (63%)
Frame = -1
Query: 482 SIPSLQFDEFSRNRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLV 303
S PS F + ++++ GLS T+E SLR+AF FG++ V +++D + K GFA+L
Sbjct: 78 SSPSSFGFNFRKTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLR 137
Query: 302 FSNEEDAQLAIKEMDGKFFEGRFIYVTNAKPGTTKLRAKAN 180
+ EE+AQ AI+ M GKF +GR I+V AKP ++LR N
Sbjct: 138 YETEEEAQKAIEGMHGKFLDGRVIFVEVAKP-RSELRQSHN 177
>gb|EOY05517.1| CBS domain-containing protein with a domain of Uncharacterized
protein function isoform 1 [Theobroma cacao]
Length = 628
Score = 81.6 bits (200), Expect = 3e-13
Identities = 39/69 (56%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -1
Query: 440 IFIKGLSKSTSEGSLRSAFSQFGEVAH-VKVILDNITKESLGFAYLVFSNEEDAQLAIKE 264
+FIKGL +ST+EG L+ FSQFGEV V V+ + ++K+SLG A++ F E+ AQLA+KE
Sbjct: 69 VFIKGLPQSTAEGRLKRVFSQFGEVKQAVNVVRERVSKQSLGSAFVWFDEEQSAQLAVKE 128
Query: 263 MDGKFFEGR 237
M+GKFF+GR
Sbjct: 129 MNGKFFDGR 137
>gb|ABK21345.1| unknown [Picea sitchensis] gi|224285462|gb|ACN40453.1| unknown
[Picea sitchensis]
Length = 198
Score = 80.9 bits (198), Expect = 5e-13
Identities = 40/92 (43%), Positives = 60/92 (65%)
Frame = -1
Query: 446 NRIFIKGLSKSTSEGSLRSAFSQFGEVAHVKVILDNITKESLGFAYLVFSNEEDAQLAIK 267
N++F+ GLS T+E +L++AFS +G+V V++I++ T+ S GF ++ FS EE+A A+K
Sbjct: 88 NKLFVTGLSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTALK 147
Query: 266 EMDGKFFEGRFIYVTNAKPGTTKLRAKANPYK 171
EM+GK G I V AKP RA+ P K
Sbjct: 148 EMNGKILNGWLISVDIAKPTPRSGRAREMPQK 179