BLASTX nr result
ID: Rheum21_contig00007646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00007646
(713 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Popu... 87 5e-15
emb|CBI25619.3| unnamed protein product [Vitis vinifera] 87 5e-15
ref|XP_006295354.1| hypothetical protein CARUB_v10024445mg, part... 87 7e-15
gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma c... 86 1e-14
ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group] g... 86 1e-14
dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa... 86 1e-14
ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group] g... 86 1e-14
gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays] 86 1e-14
gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana] 86 1e-14
ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [B... 86 1e-14
ref|XP_003564203.1| PREDICTED: 60S ribosomal protein L39-like [B... 86 1e-14
ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatu... 86 1e-14
emb|CBI25617.3| unnamed protein product [Vitis vinifera] 86 1e-14
emb|CBI21094.3| unnamed protein product [Vitis vinifera] 86 1e-14
ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus co... 86 1e-14
ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like ... 84 5e-14
ref|XP_004973151.1| PREDICTED: 60S ribosomal protein L39-3-like ... 84 5e-14
ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [S... 84 5e-14
ref|XP_004287217.1| PREDICTED: 60S ribosomal protein L39-1-like ... 84 5e-14
ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like ... 84 5e-14
>ref|XP_006372129.1| hypothetical protein POPTR_0018s12030g [Populus trichocarpa]
gi|550318562|gb|ERP49926.1| hypothetical protein
POPTR_0018s12030g [Populus trichocarpa]
Length = 104
Score = 87.0 bits (214), Expect = 5e-15
Identities = 41/55 (74%), Positives = 42/55 (76%)
Frame = -1
Query: 665 RSLKMPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
R KMPSH KMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 50 RPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 104
>emb|CBI25619.3| unnamed protein product [Vitis vinifera]
Length = 72
Score = 87.0 bits (214), Expect = 5e-15
Identities = 43/65 (66%), Positives = 45/65 (69%)
Frame = -1
Query: 695 PNSCCRFLKYRSLKMPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRR 516
PN R + KMPSH KMRQNRPIP+WIRMRTDNTIRYNAKRRHWRR
Sbjct: 8 PNFFLRRRARKISKMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRR 67
Query: 515 TKLGF 501
TKLGF
Sbjct: 68 TKLGF 72
>ref|XP_006295354.1| hypothetical protein CARUB_v10024445mg, partial [Capsella rubella]
gi|482564062|gb|EOA28252.1| hypothetical protein
CARUB_v10024445mg, partial [Capsella rubella]
Length = 77
Score = 86.7 bits (213), Expect = 7e-15
Identities = 40/55 (72%), Positives = 43/55 (78%)
Frame = -1
Query: 665 RSLKMPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
+S KMPSH KMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 23 QSFKMPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 77
>gb|EOY29623.1| Ribosomal protein L39 family protein [Theobroma cacao]
Length = 51
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|NP_001174637.1| Os06g0181566 [Oryza sativa Japonica Group]
gi|514794821|ref|XP_004973152.1| PREDICTED: 60S
ribosomal protein L39-3-like isoform X2 [Setaria
italica] gi|75251551|sp|Q5SMI4.1|RL393_ORYSJ RecName:
Full=60S ribosomal protein L39-3
gi|55771364|dbj|BAD72315.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|55773789|dbj|BAD72572.1| 60S ribosomal protein L39
[Oryza sativa Japonica Group]
gi|125554313|gb|EAY99918.1| hypothetical protein
OsI_21918 [Oryza sativa Indica Group]
gi|125596264|gb|EAZ36044.1| hypothetical protein
OsJ_20351 [Oryza sativa Japonica Group]
gi|255676783|dbj|BAH93365.1| Os06g0181566 [Oryza sativa
Japonica Group]
Length = 51
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>dbj|BAD19088.1| putative 60S ribosomal protein L39 [Oryza sativa Japonica Group]
Length = 118
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 68 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 118
>ref|NP_001048394.1| Os02g0797200 [Oryza sativa Japonica Group]
gi|162459376|ref|NP_001105473.1| 60S ribosomal protein
L39 [Zea mays] gi|242063386|ref|XP_002452982.1|
hypothetical protein SORBIDRAFT_04g036030 [Sorghum
bicolor] gi|242094938|ref|XP_002437959.1| hypothetical
protein SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|356507420|ref|XP_003522465.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356515092|ref|XP_003526235.1| PREDICTED: 60S
ribosomal protein L39-2-like isoform X1 [Glycine max]
gi|356515112|ref|XP_003526245.1| PREDICTED: 60S
ribosomal protein L39-2 isoform 1 [Glycine max]
gi|356530615|ref|XP_003533876.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|356556588|ref|XP_003546606.1| PREDICTED: 60S
ribosomal protein L39-2-like [Glycine max]
gi|502125052|ref|XP_004498777.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502132450|ref|XP_004501366.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|502172688|ref|XP_004515175.1| PREDICTED: 60S
ribosomal protein L39-2-like [Cicer arietinum]
gi|514719418|ref|XP_004954230.1| PREDICTED: 60S
ribosomal protein L39-like [Setaria italica]
gi|1710551|sp|P51425.1|RL39_MAIZE RecName: Full=60S
ribosomal protein L39
gi|55977802|sp|P51426.2|RL392_ORYSJ RecName: Full=60S
ribosomal protein L39-2
gi|306756293|sp|Q6KAJ8.2|RL391_ORYSJ RecName: Full=60S
ribosomal protein L39-1 gi|1177369|emb|CAA64728.1|
ribosomal protein L39 [Zea mays]
gi|47497037|dbj|BAD19090.1| 60S RIBOSOMAL PROTEIN L39
[Oryza sativa Japonica Group]
gi|113537925|dbj|BAF10308.1| Os02g0797200 [Oryza sativa
Japonica Group] gi|125541470|gb|EAY87865.1| hypothetical
protein OsI_09286 [Oryza sativa Indica Group]
gi|125541472|gb|EAY87867.1| hypothetical protein
OsI_09288 [Oryza sativa Indica Group]
gi|125584013|gb|EAZ24944.1| hypothetical protein
OsJ_08725 [Oryza sativa Japonica Group]
gi|125584015|gb|EAZ24946.1| hypothetical protein
OsJ_08727 [Oryza sativa Japonica Group]
gi|149390885|gb|ABR25460.1| 60S ribosomal protein l39
[Oryza sativa Indica Group] gi|195609506|gb|ACG26583.1|
60S ribosomal protein L39 [Zea mays]
gi|195609702|gb|ACG26681.1| 60S ribosomal protein L39
[Zea mays] gi|195609876|gb|ACG26768.1| 60S ribosomal
protein L39 [Zea mays] gi|195609896|gb|ACG26778.1| 60S
ribosomal protein L39 [Zea mays]
gi|195609966|gb|ACG26813.1| 60S ribosomal protein L39
[Zea mays] gi|195610006|gb|ACG26833.1| 60S ribosomal
protein L39 [Zea mays] gi|195610038|gb|ACG26849.1| 60S
ribosomal protein L39 [Zea mays]
gi|195611058|gb|ACG27359.1| 60S ribosomal protein L39
[Zea mays] gi|195612224|gb|ACG27942.1| 60S ribosomal
protein L39 [Zea mays] gi|195641468|gb|ACG40202.1| 60S
ribosomal protein L39 [Zea mays]
gi|195643810|gb|ACG41373.1| 60S ribosomal protein L39
[Zea mays] gi|195659485|gb|ACG49210.1| 60S ribosomal
protein L39 [Zea mays] gi|215767950|dbj|BAH00179.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215769187|dbj|BAH01416.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|238011942|gb|ACR37006.1| unknown [Zea mays]
gi|238012804|gb|ACR37437.1| unknown [Zea mays]
gi|241916182|gb|EER89326.1| hypothetical protein
SORBIDRAFT_10g005510 [Sorghum bicolor]
gi|241932813|gb|EES05958.1| hypothetical protein
SORBIDRAFT_04g036030 [Sorghum bicolor]
gi|413939321|gb|AFW73872.1| 60S ribosomal protein L39
[Zea mays] gi|552562415|gb|AFW64137.2| 60S ribosomal
protein L39 [Zea mays] gi|561010059|gb|ESW08966.1|
hypothetical protein PHAVU_009G089400g [Phaseolus
vulgaris] gi|561011513|gb|ESW10420.1| hypothetical
protein PHAVU_009G207900g [Phaseolus vulgaris]
gi|561028279|gb|ESW26919.1| hypothetical protein
PHAVU_003G159100g [Phaseolus vulgaris]
Length = 51
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>gb|AFW85570.1| 60S ribosomal protein L39, partial [Zea mays]
Length = 99
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 49 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 99
>gb|AEY84990.1| 60S ribosomal protein L39 [Wolffia australiana]
Length = 51
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFLIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_003572901.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
Length = 97
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 47 MPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 97
>ref|XP_003564203.1| PREDICTED: 60S ribosomal protein L39-like [Brachypodium distachyon]
gi|357145454|ref|XP_003573648.1| PREDICTED: 60S
ribosomal protein L39-like [Brachypodium distachyon]
Length = 51
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKQKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_003603321.1| 60S ribosomal protein L39 [Medicago truncatula]
gi|355492369|gb|AES73572.1| 60S ribosomal protein L39
[Medicago truncatula] gi|388513831|gb|AFK44977.1|
unknown [Medicago truncatula]
gi|388516927|gb|AFK46525.1| unknown [Medicago
truncatula]
Length = 51
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFVIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>emb|CBI25617.3| unnamed protein product [Vitis vinifera]
Length = 70
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = -1
Query: 656 KMPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
KMPSH KMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 19 KMPSHKTFMIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 70
>emb|CBI21094.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = -1
Query: 656 KMPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
KMPSH KMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 61 KMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 112
>ref|XP_002523523.1| ribosomal protein L39e, putative [Ricinus communis]
gi|223537230|gb|EEF38862.1| ribosomal protein L39e,
putative [Ricinus communis]
Length = 67
Score = 85.9 bits (211), Expect = 1e-14
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = -1
Query: 656 KMPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
KMPSH KMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 16 KMPSHKTFIIKKKLAKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 67
>ref|XP_006338352.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 84.0 bits (206), Expect = 5e-14
Identities = 39/51 (76%), Positives = 39/51 (76%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH K RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_004973151.1| PREDICTED: 60S ribosomal protein L39-3-like isoform X1 [Setaria
italica]
Length = 52
Score = 84.0 bits (206), Expect = 5e-14
Identities = 39/50 (78%), Positives = 39/50 (78%)
Frame = -1
Query: 650 PSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
PSH KMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 3 PSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 52
>ref|XP_004964674.1| PREDICTED: 60S ribosomal protein L39-like [Setaria italica]
Length = 51
Score = 84.0 bits (206), Expect = 5e-14
Identities = 39/51 (76%), Positives = 39/51 (76%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH K RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFRIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_004287217.1| PREDICTED: 60S ribosomal protein L39-1-like [Fragaria vesca subsp.
vesca]
Length = 51
Score = 84.0 bits (206), Expect = 5e-14
Identities = 39/51 (76%), Positives = 40/51 (78%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH KMRQNRPIP+WIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKTFIIKKKLGKKMRQNRPIPHWIRMRTDNTIRYNAKRRHWRRTKLGF 51
>ref|XP_004251767.1| PREDICTED: 60S ribosomal protein L39-3-like [Solanum lycopersicum]
gi|565353539|ref|XP_006343687.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
gi|565366803|ref|XP_006350074.1| PREDICTED: 60S
ribosomal protein L39-3-like [Solanum tuberosum]
Length = 51
Score = 84.0 bits (206), Expect = 5e-14
Identities = 39/51 (76%), Positives = 39/51 (76%)
Frame = -1
Query: 653 MPSHXXXXXXXXXXXKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 501
MPSH K RQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1 MPSHKSFMIKKKLAKKQRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51