BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00007543
         (2065 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao] gi|508...   603   e-170
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   603   e-169
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     602   e-169
gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus pe...   595   e-167
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   578   e-162
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   575   e-161
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   571   e-160
ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,...   567   e-159
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   566   e-158
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   564   e-158
ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,...   561   e-157
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   561   e-157
gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus...   560   e-157
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   560   e-157
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   560   e-156
ref|XP_002333134.1| predicted protein [Populus trichocarpa]           558   e-156
ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,...   551   e-154
ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,...   550   e-153
ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplas...   549   e-153
ref|XP_002331841.1| predicted protein [Populus trichocarpa]           549   e-153

>gb|EOY23460.1| Sigma factor E isoform 1 [Theobroma cacao]
            gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
            [Theobroma cacao]
          Length = 516

 Score =  603 bits (1556), Expect = e-170
 Identities = 327/519 (63%), Positives = 377/519 (72%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVV+ SSSA+RTPLGL  KF S+Q  +S+R   +AFK ++                 IE
Sbjct: 1    MGVVSVSSSAARTPLGLSTKF-STQRCTSRRPLTVAFKADKSDNTALVTPQEHILLP-IE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSAC---DE 594
            T  EH  +R      P   I+  V  +  SP T E+D+NEAAAKLE+IYKL  A    D 
Sbjct: 59   TAKEHPKRRGKAKKDPK--IVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDV 116

Query: 595  QEXXXXXXXXXXXXXENAQDDQKEKGSG--YVVRSKIKKAKRLSLDTRIELKKHNEENKS 768
            +E              + + D+K   S    VVR++  + KRLSLD RI LKK+ EE   
Sbjct: 117  EEVEGKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPV 176

Query: 769  PLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
                              LVR+YS STDLVS+DW+KMKIPPVLPS EH WLFKLMQPMK 
Sbjct: 177  VSVRRKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKA 236

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
            L+Q KE+LQ +LGR+PT+ EL EA NM   QVR+HLEVG+AARNKLIKHNLRLVLF +NK
Sbjct: 237  LLQAKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINK 296

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YFQ+F +GP+ QDLCQAGVKGLITAIDRFEP+R+FRLSTYS+FWIRHAIIRSMT+SSFTR
Sbjct: 297  YFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFTR 356

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            VSFGLESVRVEIQ+AKL+L+FEL R PTEEEI+K+VGISPERYQE+MRASK V SLHSRH
Sbjct: 357  VSFGLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSRH 416

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
            ++TQEE INGITD+   GGD RRQPA             KPKESLVIRQRYGLDGKGDRT
Sbjct: 417  SVTQEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 476

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 477  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|302143685|emb|CBI22546.3| unnamed protein product
            [Vitis vinifera]
          Length = 518

 Score =  603 bits (1554), Expect = e-169
 Identities = 333/522 (63%), Positives = 386/522 (73%), Gaps = 7/522 (1%)
 Frame = +1

Query: 244  MGVVTASSSAS--RTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXX 417
            MGVVT SSSAS  RTP GL+ KF S+  T  +R  +LAFK ++                 
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKF-SNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLP- 58

Query: 418  IETTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQ 597
            IET+ +H+ KRL   ++PSK + +AVS +  SP + ELD+NEAAAKLE+IYKL  A D  
Sbjct: 59   IETSKDHK-KRLRRASKPSKRV-KAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVS 116

Query: 598  EXXXXXXXXXXXXXENAQ----DDQKEKG-SGYVVRSKIKKAKRLSLDTRIELKKHNEEN 762
            E                +    DD+ EK  S  VVR   KK KRLSL+ RI L K  +E 
Sbjct: 117  EAEDLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEK 176

Query: 763  KSPLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPM 942
                                LVR YS STDLVS+DWKKMKIPPVLP SEHAWLFKLMQPM
Sbjct: 177  AVASIQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPM 236

Query: 943  KTLIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVM 1122
            K L++VK++LQ +LGREPTD EL EA++M  VQVRRH+EVG+AARNKLIKHNLRLVLFV+
Sbjct: 237  KGLLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVI 296

Query: 1123 NKYFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSF 1302
            NKYFQEF +GPK QDLCQAGVKGLITAIDRFEPKR FRLSTY +FWIRHAI+RSMT+SSF
Sbjct: 297  NKYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSF 356

Query: 1303 TRVSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHS 1482
            TRVSFGLESVRVEIQ+AKL+L+F+L+R+PTEEEI+++VGISPERY E+MRASKSV+SLH+
Sbjct: 357  TRVSFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHA 416

Query: 1483 RHAITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGD 1662
            RHA TQEE INGITDV   GGD+ RQ A             KPKESLV+RQRYGLDGKGD
Sbjct: 417  RHATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGD 476

Query: 1663 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIY 1788
            RTLGEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLR+YI+
Sbjct: 477  RTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYIF 518


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  602 bits (1553), Expect = e-169
 Identities = 332/519 (63%), Positives = 377/519 (72%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSSASRTPLGL  KF S++S+  K+  I+AFK ++                 +E
Sbjct: 1    MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILP-VE 59

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            T  E  +K     A+ S   ++AV+ + AS  T E+D+NEAAAKLE+I+KL SA  E   
Sbjct: 60   TRKE--VKSRVGKAKKSSNRVKAVATDEASTSTMEVDYNEAAAKLENIFKLSSADVEDAV 117

Query: 604  XXXXXXXXXXXXENAQDDQ----KEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENKSP 771
                           + D+    K   S  VVR++ KKAKRLSL  R+ELK+  EEN + 
Sbjct: 118  GLTSRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENVAV 177

Query: 772  -LTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
             L                LVR YS STDLVS+DWKKMKIPPVLPSSEH WLFKLMQP+K 
Sbjct: 178  VLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPLKQ 237

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
            L QV E LQ  LGREPT+ EL EA N+ VVQV+RHLE GRAARNKLIKHNLRLVLFVMNK
Sbjct: 238  LFQVGEDLQKTLGREPTENELAEATNISVVQVKRHLEAGRAARNKLIKHNLRLVLFVMNK 297

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YFQ+F +GPK QDLCQAGV+GLITAIDRFEPKR+FRLSTY +FWIRHAIIRSMTVSSFTR
Sbjct: 298  YFQDFTNGPKFQDLCQAGVRGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTR 357

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            VSFGLESVR EIQKAK++L FELKR+PTEEEI+++VGISPERY E+MRASK VISL+SRH
Sbjct: 358  VSFGLESVRAEIQKAKIELTFELKRLPTEEEIIEKVGISPERYHEVMRASKPVISLNSRH 417

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
              TQEE IN ITDV    GD RR+PA             KPKESLVIRQRYGLDGKGDRT
Sbjct: 418  VTTQEEFINAITDVDGVDGDDRRKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 477

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 478  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYM 516


>gb|EMJ20209.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  595 bits (1535), Expect = e-167
 Identities = 328/522 (62%), Positives = 383/522 (73%), Gaps = 8/522 (1%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSSASRTPLGL  K    +ST  K L I+AFKT+                  IE
Sbjct: 1    MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPL-IVAFKTDEANKTALVAPQEKIPLP-IE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYK----LDSACD 591
            T  +HQ KRL    + +K + ++ + +VASP T E+D+NEAAAKLE++YK     ++  D
Sbjct: 59   TRKKHQ-KRLGKARKLAKSV-KSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSD 116

Query: 592  EQEXXXXXXXXXXXXXENAQDD---QKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEEN 762
             ++             + ++ D    + + S  VVR++ KKAKRLSL+ R+ LK + +E 
Sbjct: 117  VEDVDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEK 176

Query: 763  K-SPLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQP 939
              S +                LVR YS STDLVS+DWKKMKIPPVL SSEHAWLFKLMQP
Sbjct: 177  VISSIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQP 236

Query: 940  MKTLIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFV 1119
            MK L++VKE+LQ +LGREPT+ EL EA NM VVQV++HLEVGRAAR+KLIKHNLRLVLFV
Sbjct: 237  MKGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFV 296

Query: 1120 MNKYFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSS 1299
            MNKYFQ+F +GPK QDLCQAGVKGLITAIDRFEPKR FRLSTY +FWIRHAIIRSMT+SS
Sbjct: 297  MNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSS 356

Query: 1300 FTRVSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLH 1479
            FTRVSFGLESVR EIQKAKL ++F LKR+PTE+EI+++VGISPERY E+MRASK V SLH
Sbjct: 357  FTRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLH 416

Query: 1480 SRHAITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKG 1659
            SRH  TQEE INGITDV    GD R++PA             KPKESLVIRQRYGLDGKG
Sbjct: 417  SRHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 476

Query: 1660 DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 477  DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 520

 Score =  578 bits (1489), Expect = e-162
 Identities = 320/522 (61%), Positives = 373/522 (71%), Gaps = 8/522 (1%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSS SRTPLGL     SSQ ++ ++  I+AF+T++                 IE
Sbjct: 1    MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLP-IE 59

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            T  + Q KRL    +  K + +A     A     ELD+NEAAAKLE++YK     +  + 
Sbjct: 60   TGKKVQ-KRLGKARKLPKSV-KAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDV 117

Query: 604  XXXXXXXXXXXXENAQ-----DDQKEKGSG--YVVRSKIKKAKRLSLDTRIELKKHNEEN 762
                        +  +     DD+ EK +    VVRS  KKAKRLSLD R+ LK + +E 
Sbjct: 118  ENVDGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEK 177

Query: 763  -KSPLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQP 939
              + +                LVR YS STDLVS+DWKKM+IPPVL SSEH WLFKLMQP
Sbjct: 178  VAASVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQP 237

Query: 940  MKTLIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFV 1119
            MK L++VKE LQ +LGREP   EL EA NM VVQV+RHLEVGRAARNKLIKHNLRLVLFV
Sbjct: 238  MKGLLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFV 297

Query: 1120 MNKYFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSS 1299
            +NKYFQ+F +GPK QDLCQAGVKGLITAIDRFEP+R+FRLSTY +FWIRHAIIRSMT+SS
Sbjct: 298  INKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSS 357

Query: 1300 FTRVSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLH 1479
            FTRVSFGLESVR EIQKAKL+++ +LKR+PTE+EI+++VGISPERY E+MRASK V SL+
Sbjct: 358  FTRVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLN 417

Query: 1480 SRHAITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKG 1659
            SRH++TQEE INGITDV    GD RR+PA             KPKESLVIRQRYGLDGKG
Sbjct: 418  SRHSVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKG 477

Query: 1660 DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI
Sbjct: 478  DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 519


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 501

 Score =  575 bits (1482), Expect = e-161
 Identities = 318/519 (61%), Positives = 370/519 (71%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVTASSSA+RTPLGL  KF + +ST  KR  ++AFK ++                   
Sbjct: 1    MGVVTASSSAARTPLGLSLKFSTYRSTV-KRSLVVAFKEDKANDIILVPPR--------- 50

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSAN-VASPFTCELDFNEAAAKLESIYKLDSACDEQE 600
                   +R  L  + SKG  +    N   S  T E+D+NEAAAKLE+IYKL  A D  +
Sbjct: 51   -------ERTPLPIETSKGKKRRGKTNREVSSGTLEVDYNEAAAKLENIYKLSPATDTSD 103

Query: 601  XXXXXXXXXXXXXENAQDDQKEKG----SGYVVRSKIKKAKRLSLDTRIELKKHNEENKS 768
                         +    +  EK     S  +VR++ KK KRLSLD RI LKK+ EE   
Sbjct: 104  VDINGLIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVV 163

Query: 769  PLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
                              LVR YS ST+LVS+DW+KMKIPPVLPS+EHAWLFKLMQPMKT
Sbjct: 164  GPIRKKKDSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKT 223

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
            L+ VK  LQ  LGR+PTD EL EA NM V +VR+ LEVGRAARNKLIKHNLRLV+FVMNK
Sbjct: 224  LLPVKADLQKNLGRDPTDGELAEATNMNVEKVRKQLEVGRAARNKLIKHNLRLVMFVMNK 283

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YFQ+F +GP+ QDLCQAGVKGLITAIDRFEP+R+F+LSTYS+FWIRHAIIRSMT+SSFT+
Sbjct: 284  YFQDFANGPRFQDLCQAGVKGLITAIDRFEPQRRFQLSTYSLFWIRHAIIRSMTLSSFTK 343

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            VSFGLESVR EIQKAKL+L+ EL+R PTEEEI++RVGIS ERY E++RA+K  +SLH+RH
Sbjct: 344  VSFGLESVRTEIQKAKLELLIELQRRPTEEEIIERVGISAERYHEVIRAAKPALSLHARH 403

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
            A+TQEE INGITD+   GGD RRQPA             KPKESLVIRQRYGLDGKGDRT
Sbjct: 404  AVTQEEFINGITDID--GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 461

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRK+EVKALMKLKHPARVDYLRRY+
Sbjct: 462  LGEIAGNLNISREMVRKYEVKALMKLKHPARVDYLRRYV 500


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  571 bits (1472), Expect = e-160
 Identities = 316/521 (60%), Positives = 378/521 (72%), Gaps = 6/521 (1%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSSASR+PLGL  +F S++    KR  I++FK ++                 IE
Sbjct: 1    MGVVTVSSSASRSPLGLSSRF-STRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLS-IE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYK-----LDSAC 588
            T+ E++ KR   V++ S+ +  AV+   ASP T ELD++EAAAKLESIYK       S  
Sbjct: 59   TSKENE-KRSRRVSKRSERV-HAVAIE-ASPSTLELDYSEAAAKLESIYKRSLETASSNT 115

Query: 589  DEQEXXXXXXXXXXXXXENAQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNE-ENK 765
            + Q+                 ++ K++ +  VV+++ K +KRL+LD RI L K+ E E  
Sbjct: 116  EVQDHLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMV 175

Query: 766  SPLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMK 945
            +                  LVR YSG+TDL S+DWKKMKIPPVLPSSEH WLFKLMQPMK
Sbjct: 176  ASSERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMK 235

Query: 946  TLIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMN 1125
             ++QVKE+LQ +LGREPTD E+ EA NM   ++R+ LEVGRAARNKLIKHNLRLVLFVMN
Sbjct: 236  AILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMN 295

Query: 1126 KYFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFT 1305
            KYFQ+F +G + QDLCQAGVKGLITAIDRFEP RKFRLSTY +FWIRHAIIRSMT SSFT
Sbjct: 296  KYFQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFT 355

Query: 1306 RVSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSR 1485
            +V FGLES+RVEIQKAKL+L+FEL+RIPT+EEI++RVG+SPERY E+M+ SK V SLH+R
Sbjct: 356  KVPFGLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHAR 415

Query: 1486 HAITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDR 1665
            +  TQEELINGITDV    GDKR+QPA             KPKESLVIRQRYGLDGKGDR
Sbjct: 416  NKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 475

Query: 1666 TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIY 1788
            TLGEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYI+
Sbjct: 476  TLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_004166500.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 515

 Score =  567 bits (1461), Expect = e-159
 Identities = 318/520 (61%), Positives = 375/520 (72%), Gaps = 6/520 (1%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SS+A+RTP  L  KF S+ S++ KR  I+AFK ++                 +E
Sbjct: 1    MGVVTVSSAAARTPFRLGVKF-SNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLP-VE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            + +  + KR    ++P K + +AV  + A+P + +LD+NEAAAKLE+I+KL S   E   
Sbjct: 59   SNNRRK-KRSGNTSKPLKRV-KAVLIDEATPCSLDLDYNEAAAKLENIFKL-SPMTEDSD 115

Query: 604  XXXXXXXXXXXXENAQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELK-----KHNEENKS 768
                        + ++      G G +VR++ K+ KRL LD RI LK     K N+E K+
Sbjct: 116  KECKDGRSKRGQKRSKKSANRPGDG-IVRNQTKRIKRLDLDKRIALKNKRKAKRNKEGKA 174

Query: 769  -PLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMK 945
             P                 LVR+YS STDLVS+DWKKMKIPPVLPSSEH  LFKL+QPMK
Sbjct: 175  VPSLRKQKETKNEDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMK 234

Query: 946  TLIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMN 1125
             L++V+E LQ  LGREPT+ EL  A NM V+QVRR LEVGRAARNKLIKHNLRLVLFV+N
Sbjct: 235  ALVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVIN 294

Query: 1126 KYFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFT 1305
            KYF++F SGPK QDLCQAGVKGLITAIDRFEPKRKFRLSTY++FWIRHAIIRSMT+SSFT
Sbjct: 295  KYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT 354

Query: 1306 RVSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSR 1485
            RVSFGL+SVRVEIQ+AKL+L+ EL R+PTE EI  +VGIS ERY E+MRA+K V SLHSR
Sbjct: 355  RVSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSR 414

Query: 1486 HAITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDR 1665
            H+ T EELINGITDV   GGD RRQPA             KPKESLVIRQRYGLDGKG+R
Sbjct: 415  HSTTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNR 474

Query: 1666 TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 475  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 514


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
            gi|567858878|ref|XP_006422122.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
            gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Citrus
            sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Citrus
            sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Citrus
            sinensis] gi|557523994|gb|ESR35361.1| hypothetical
            protein CICLE_v10004760mg [Citrus clementina]
            gi|557523995|gb|ESR35362.1| hypothetical protein
            CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  566 bits (1458), Expect = e-158
 Identities = 310/519 (59%), Positives = 368/519 (70%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSS +R+P+GL      S  ++SKR  I+AFK ++                 IE
Sbjct: 1    MGVVTISSSPARSPIGLST---ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLP-IE 56

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            T   HQ +R     +  +  ++ V ++ ASP T ++D+NEAAAKLE+IYKL  A    E 
Sbjct: 57   TPKRHQKRRENSRKRLER--VKGVFSDEASPCTLDVDYNEAAAKLENIYKLSPAVTTSEV 114

Query: 604  XXXXXXXXXXXXENAQDDQKEKGSGYV-----VRSKIKKAKRLSLDTRIELKKHNEENKS 768
                           +  + EK S  V     VR+++K+ KRLSLD RIEL+K NE+ K 
Sbjct: 115  KYADGVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRK-NEDEKV 173

Query: 769  PLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
                              LVR YS STDLVS+DWKKMKIPPVL S+EH WLFKLMQPMK 
Sbjct: 174  VTKTRKTDSKDEHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKV 233

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
             +QVKE LQ +LGREPTD EL EA NM   QV++ LEVGRAARNKLIKHNLRLVLFV+ K
Sbjct: 234  FVQVKEQLQKDLGREPTDVELAEATNMSAAQVKKCLEVGRAARNKLIKHNLRLVLFVIKK 293

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YFQ+F +GP+ QDLCQAGVKGLITAIDRFEPKR+FRLSTY +FWIRHAIIRSMTVSSFTR
Sbjct: 294  YFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTVSSFTR 353

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            V FGLESVR EIQ+AKL+L+FELKR+PT+EEI++ V ISPERY+E+M+ASK ++SLHSRH
Sbjct: 354  VPFGLESVRGEIQRAKLELLFELKRVPTDEEIIQGVNISPERYREVMKASKPILSLHSRH 413

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
             +TQEE INGITDV     + +RQPA             KPKESLVIRQR+GLDGKGDRT
Sbjct: 414  GVTQEEFINGITDVDGVENENQRQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRT 473

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRKHEVK LMKLKHP RVDYLR+++
Sbjct: 474  LGEIAGNLNISREMVRKHEVKGLMKLKHPTRVDYLRQHM 512


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
            gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
            polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 512

 Score =  564 bits (1453), Expect = e-158
 Identities = 309/516 (59%), Positives = 369/516 (71%), Gaps = 2/516 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGV+T S+SA+RTPL L+ +  S Q    KR  ILAFK N+                 +E
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQVH-KRPIILAFKGNKSNKTTLVSPQEKIPLP-LE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACD--EQ 597
            T  +HQ KR+   ++  K + +AVS    SP T ++D+NEAAAKLE+IYKL    D    
Sbjct: 59   TAKKHQ-KRVGKTSESLKRV-RAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNV 116

Query: 598  EXXXXXXXXXXXXXENAQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENKSPLT 777
            E             +   +++ +     VVR++ KKAKRLSLD RI LK + +E     T
Sbjct: 117  EDIDSKIERVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQT 176

Query: 778  XXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKTLIQ 957
                           L+R+YS STDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMK L+Q
Sbjct: 177  QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236

Query: 958  VKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1137
             KE L+ E+ +E T  EL +A NM ++QVR+ +EVGRAARNKLIKHNLRLVLFV+NKYFQ
Sbjct: 237  AKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQ 295

Query: 1138 EFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTRVSF 1317
            +F SGP+ QDLCQAGVKGLITAIDRFEPKR+ +LSTYS+FWIRH+I+RS+T+SSFTRV F
Sbjct: 296  DFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 1318 GLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRHAIT 1497
            GLE VRV+IQ+ KLKL FEL+R PTEEE+V+R+GIS ERY E+M+ASK ++SLHSRH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITT 415

Query: 1498 QEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1677
            QEE INGITDV    GD RRQ A             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475

Query: 1678 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            IAGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 476  IAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 511


>ref|XP_004149458.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  561 bits (1447), Expect = e-157
 Identities = 315/519 (60%), Positives = 370/519 (71%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SS+A+RTP  L  KF S+ S++ KR  I+AFK ++                 +E
Sbjct: 1    MGVVTVSSAAARTPFRLGVKF-SNHSSTLKRPSIVAFKADKHTNTTLVSPHEQVTLP-VE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            + +  + KR    ++P K + +AV  + A+P + +LD+NEAAAKLE+I+KL S   E   
Sbjct: 59   SNNRRK-KRSGNTSKPLKRV-KAVLIDEATPCSLDLDYNEAAAKLENIFKL-SPMTEDSD 115

Query: 604  XXXXXXXXXXXXENAQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENKSPLTXX 783
                        + ++      G G +VR++ K+ KRL LD RI LK   E     L   
Sbjct: 116  KECKDGRSKRGQKRSKKSANRPGDG-IVRNQTKRIKRLDLDKRIALKNKKEGKAVALLRK 174

Query: 784  XXXXXXXXXXXXX-----LVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
                              LVR+YS STDLVS+DWKKMKIPPVLPSSEH  LFKL+QPMK 
Sbjct: 175  QKDTKNEADEIDDDEIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKA 234

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
            L++V+E LQ  LGREPT+ EL  A NM V+QVRR LEVGRAARNKLIKHNLRLVLFV+NK
Sbjct: 235  LVEVQEELQKGLGREPTEGELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINK 294

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YF++F SGPK QDLCQAGVKGLITAIDRFEPKRKFRLSTY++FWIRHAIIRSMT+SSFTR
Sbjct: 295  YFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTR 354

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            VSFGL+SVRVEIQ+AKL+L+ EL R+PTE EI  +VGIS ERY E+MRA+K V SLHSRH
Sbjct: 355  VSFGLDSVRVEIQRAKLELLCELHRLPTEGEITAKVGISQERYLEVMRATKPVYSLHSRH 414

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
            + T EELINGITDV   GGD RRQPA             KPKESLVIRQRYGLDGKG+RT
Sbjct: 415  STTSEELINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRT 474

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY+
Sbjct: 475  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL 513


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
            gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
            [Glycine max]
          Length = 512

 Score =  561 bits (1446), Expect = e-157
 Identities = 309/516 (59%), Positives = 367/516 (71%), Gaps = 2/516 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT S+ A+RTPL L+ +  S Q    KR  I+AFK N+                 IE
Sbjct: 1    MGVVTVSTLAARTPLRLNTRLTSHQQVH-KRPLIVAFKGNKLNKAALVSPQEQIPLP-IE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACD--EQ 597
            T  + Q KR+   ++  K + +AVS    SP T ++D+NEAAAKLE+IYKL    D    
Sbjct: 59   TAKKDQ-KRVGKTSESLKRV-RAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNM 116

Query: 598  EXXXXXXXXXXXXXENAQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENKSPLT 777
            E                 ++  ++    VVR++ KKAKRLSLD RI LK + +E     T
Sbjct: 117  EDIDSKVERVLWRRRKVGNEHDDENCDIVVRNQNKKAKRLSLDKRITLKNNAKEEVIDQT 176

Query: 778  XXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKTLIQ 957
                           L+R+YS STDLVSMDWKKMKIP VLPSSEHAWLFKLMQPMK L+Q
Sbjct: 177  QKIRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQ 236

Query: 958  VKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1137
             KE LQ+ +G+E TD EL +A NM ++QVR+ +EVGRAARNKLIKHNLRLVLFV++KYFQ
Sbjct: 237  AKEDLQS-VGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQ 295

Query: 1138 EFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTRVSF 1317
            +F SG + QDLCQAGVKGLITAIDRFEPKR+ +LSTYS+FWIRH+I+RS+T+SSFTRV F
Sbjct: 296  DFASGRRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 355

Query: 1318 GLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRHAIT 1497
            GLE VRV+IQ+ KLKL FEL+R PTEEE+V+R+GISPERY E+M+ASK ++SLHSRH  T
Sbjct: 356  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITT 415

Query: 1498 QEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1677
            QEE INGITDV    GD RRQ A             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 416  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 475

Query: 1678 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            IAGNLNISREMVRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 476  IAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYV 511


>gb|ESW33340.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  560 bits (1443), Expect = e-157
 Identities = 305/517 (58%), Positives = 377/517 (72%), Gaps = 3/517 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT S+SA+RTPL L  K  S Q  + KRL I+AFK N+                 +E
Sbjct: 1    MGVVTVSTSAARTPLRLSTKLISLQQ-AHKRLLIVAFKGNKLNKTTLVSPKEQIPLP-LE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSA---CDE 594
            T  +H+ KR+       K + +AVS +  +PFT ++D+NEAAAKLE+IYKL S    CD 
Sbjct: 59   TAKKHR-KRIGKTNDSVKRV-RAVSTDETTPFTLDVDYNEAAAKLENIYKLSSVSSTCDT 116

Query: 595  QEXXXXXXXXXXXXXENAQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENKSPL 774
            ++             +N  D+  ++  G VVR++ KKAKRLSLD RI LK+ N + +  +
Sbjct: 117  EDIDSKTKRVLRRR-KNVGDEHDDRNDGSVVRNQNKKAKRLSLDKRIALKR-NPKQEVIV 174

Query: 775  TXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKTLI 954
                            L+R YS STDLVSMDWKK+KIPPVLPSSEHAWLFKLM+PMK L+
Sbjct: 175  QAQKKRDVNRIENIDALIREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELL 234

Query: 955  QVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNKYF 1134
            QV+E LQ E+G+E +D EL +A ++ V+QVR+ LEVG+AARNKLIKHNLRLVLFV+NKYF
Sbjct: 235  QVREDLQ-EVGKEISDGELADANSISVIQVRKALEVGQAARNKLIKHNLRLVLFVINKYF 293

Query: 1135 QEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTRVS 1314
            Q+F SGP+ QDLCQAGVKGLITAIDRFE KR+ +LSTYS+FWIRH+I+RS+T+SS TRV 
Sbjct: 294  QDFASGPRFQDLCQAGVKGLITAIDRFESKRRLQLSTYSLFWIRHSIVRSITLSSLTRVP 353

Query: 1315 FGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRHAI 1494
            FGL+ VR +I +AKL+L FEL+R PTE+E+V+R+GISPERY ++++ASK +ISLHSRH +
Sbjct: 354  FGLDRVRADIHRAKLELRFELQRSPTEKEVVERIGISPERYYDVLKASKPIISLHSRHIV 413

Query: 1495 TQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLG 1674
            TQEE INGITD+    GD RRQ A             KPKESLV+RQRYGLDGKGDRTLG
Sbjct: 414  TQEEFINGITDLDGVDGDNRRQLAVLRLALDDVLDSLKPKESLVMRQRYGLDGKGDRTLG 473

Query: 1675 EIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            EIAGNLNISREMVRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 474  EIAGNLNISREMVRKHEVKALMKLKHPARLDYLRRYV 510


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform 1 [Solanum
            lycopersicum]
          Length = 516

 Score =  560 bits (1443), Expect = e-157
 Identities = 313/522 (59%), Positives = 376/522 (72%), Gaps = 7/522 (1%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSSASR+PLGL  +F S++    KR  I++FK +                  IE
Sbjct: 1    MGVVTVSSSASRSPLGLSSRF-SARLCPLKRPVIVSFKKD-ITKNTTLVSPKESISSPIE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYK--LDSACDEQ 597
            T+ E++ KR   V++ ++ +  AV+   A P T ELD++EAAAKLESIYK  L++A    
Sbjct: 59   TSKENE-KRSRRVSKRTERV-HAVTIE-APPSTLELDYSEAAAKLESIYKRSLETASPNT 115

Query: 598  EXXXXXXXXXXXXXEN---AQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENK- 765
            E             +    + ++ K++    VV+++ KK+KRL+LD RI L K N+E K 
Sbjct: 116  EVKDHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLK-NKEGKM 174

Query: 766  -SPLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPM 942
             +                  LVR YSG+TDL S+DWKKMKIPPVLPSSEH WLFKLMQPM
Sbjct: 175  LASSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPM 234

Query: 943  KTLIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVM 1122
            K ++QVKE+LQ +LGREPTD E+ EA NM   ++R+ LE GRAARNKLIKHNLRLVLFVM
Sbjct: 235  KAILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVM 294

Query: 1123 NKYFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSF 1302
            NKYFQ+F +  + QDLCQAGVKGLITAIDRFEP RKFRLSTY +FWIRHAIIR MT SSF
Sbjct: 295  NKYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSF 354

Query: 1303 TRVSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHS 1482
            T+V FGLES+RVEIQKAKL+L+FEL+RIPT++EI+KRVG SPERY E+M+ SK + SLH+
Sbjct: 355  TKVPFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHA 414

Query: 1483 RHAITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGD 1662
            R+  TQEELINGITDV    GDKR+QPA             KPKESLVIRQRYGLDGKGD
Sbjct: 415  RNKTTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGD 474

Query: 1663 RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIY 1788
            RTLGEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RRYI+
Sbjct: 475  RTLGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYIF 516


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
            trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
            sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  560 bits (1442), Expect = e-156
 Identities = 316/519 (60%), Positives = 363/519 (69%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVV+ SSSASRTPLGL  KF S+  +++KR  I+AFK N+                 +E
Sbjct: 1    MGVVSVSSSASRTPLGLSTKF-STYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLP-VE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            TT     KRL   ++ S   ++AV   V SP T  +D+NEAAAKLE+IYKL    D  + 
Sbjct: 59   TTKGK--KRLGK-SKKSSNRLKAVRTEV-SPCTLLVDYNEAAAKLENIYKLSPGTDTSDV 114

Query: 604  XXXXXXXXXXXXENAQ----DDQKEKGSG-YVVRSKIKKAKRLSLDTRIELKKHNEENKS 768
                           +    D + E  +G  +VR++ KKAKRLSL+ RI L+  NEE   
Sbjct: 115  EDASGVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLV 174

Query: 769  PLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
                              LVR YS STDLVS+DWKKMKIPPVL SSEH WLFKLMQPMK 
Sbjct: 175  SSAGKRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKA 234

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
            L+QVKE LQ  LG EPTD EL +A NM V+QVR+ + VGRAARNKLIKHNLRLVLFV+ K
Sbjct: 235  LLQVKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKK 294

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YFQ+F +G K QD CQAGVKGLITAIDRFEPKR+FRLSTY +FWIRHAIIRSMT+SSFTR
Sbjct: 295  YFQDFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTR 354

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            VSFGLES+R EIQKAKL+L F+LKR P E+EI+++V ISPERY E+ RASK V+SLHSRH
Sbjct: 355  VSFGLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRH 414

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
              TQEE I GI DV   GGD RRQ A             KPKESLV+RQRYGLDGKGDRT
Sbjct: 415  KTTQEEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRT 472

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRRY+
Sbjct: 473  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_002333134.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  558 bits (1437), Expect = e-156
 Identities = 312/519 (60%), Positives = 363/519 (69%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVV+ SSSASRTPLGL  KF S+  +++KR  I+AFK ++                 +E
Sbjct: 1    MGVVSVSSSASRTPLGLSTKF-STYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLP-VE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            TT     KRL   ++ S   ++AV   V SP T  +D+NEAAAKLE+IYKL    D  + 
Sbjct: 59   TTKGK--KRLGK-SKKSSNRLKAVRTEV-SPCTLLVDYNEAAAKLENIYKLSPGTDTSDV 114

Query: 604  XXXXXXXXXXXXENAQ-----DDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENKS 768
                           +      + +++    +VR++ KKAKRLSL+ RI L+  NEE   
Sbjct: 115  EDASGVIRRGRQRKRKISEGGKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLV 174

Query: 769  PLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
                              LVR YS STDLVS+DWKKMKIPPVL SSEH WLFKLMQPMK 
Sbjct: 175  SSAGKRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKA 234

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
            L+QVKE LQ  LG EPTD EL +A+NM V+QVR+ + VGRAARNKLIKHNLRLVLFV+ K
Sbjct: 235  LLQVKEHLQENLGGEPTDVELAKAINMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKK 294

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YFQ+F +G K QD CQAGVKGLITAIDRFEPKR+FRLSTY +FWIRHAIIRSMT+SSFTR
Sbjct: 295  YFQDFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTR 354

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            VSFGLES+R EIQKAKL+L F+LKR P E+EI+++V ISPERY E+ RASK V+SLHSRH
Sbjct: 355  VSFGLESIRSEIQKAKLELWFQLKRQPMEDEIIEKVRISPERYHEVTRASKPVLSLHSRH 414

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
              TQEE I GI DV   GGD RRQ A             KPKESLV+RQRYGLDGKGDRT
Sbjct: 415  KTTQEEFIGGIADVD--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRYGLDGKGDRT 472

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRRY+
Sbjct: 473  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYV 511


>ref|XP_006581623.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 507

 Score =  551 bits (1421), Expect = e-154
 Identities = 303/518 (58%), Positives = 363/518 (70%), Gaps = 4/518 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSSA+RTPLGL+ KF +++    KR  I+AFK ++                 +E
Sbjct: 1    MGVVTVSSSAARTPLGLNTKFCNNRL---KRPLIVAFKGDKHNDSALVATQEKIPVP-VE 56

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            T  + Q KR+        G    +    +SP + ++D+NEAAA LE++YKL  A D  E 
Sbjct: 57   TAKKTQKKRI--------GKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAEC 108

Query: 604  XXXXXXXXXXXXENAQDDQKEKG--SGYVVRS--KIKKAKRLSLDTRIELKKHNEENKSP 771
                        +   D+ +EK     +VVR+  K KK KRL+LD RI LK +   ++  
Sbjct: 109  IDGKIKRVSRRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVI 168

Query: 772  LTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKTL 951
             T               L+R YS STD VSMDWK+M+IPPVL SSEHAWLFKLMQPMK L
Sbjct: 169  PTRKKRNVGNKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKAL 228

Query: 952  IQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNKY 1131
            +QVKE LQ EL REP D EL +A NM + QVR+ ++VG+AARNKLIKHNLRLVLFV+NKY
Sbjct: 229  LQVKEDLQQELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKY 288

Query: 1132 FQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTRV 1311
            F +F SGP+ QDLCQAGVKGLITAIDRFEP R+FRLSTYS+FWIRHAIIRSMT+S+FTRV
Sbjct: 289  FTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRV 348

Query: 1312 SFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRHA 1491
             FGLESVR EIQKAK +L FEL+R PTEEEI++RV ISPERY ++++ASKS++SL+SRH 
Sbjct: 349  PFGLESVRAEIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHT 408

Query: 1492 ITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTL 1671
             TQEE INGI D     GD R+QPA             KPKESLVIRQR+GLDGKGDRTL
Sbjct: 409  TTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTL 468

Query: 1672 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            GEIAGNLNISREMVRKHEVKALMKLKH AR+DYLRRY+
Sbjct: 469  GEIAGNLNISREMVRKHEVKALMKLKHSARLDYLRRYV 506


>ref|XP_006593758.1| PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like isoform X3 [Glycine max]
          Length = 488

 Score =  550 bits (1416), Expect = e-153
 Identities = 301/516 (58%), Positives = 360/516 (69%), Gaps = 2/516 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGV+T S+SA+RTPL L+ +  S Q                                 +E
Sbjct: 1    MGVITVSTSAARTPLRLNTRLISHQQEK--------------------------IPLPLE 34

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACD--EQ 597
            T  +HQ KR+   ++  K + +AVS    SP T ++D+NEAAAKLE+IYKL    D    
Sbjct: 35   TAKKHQ-KRVGKTSESLKRV-RAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCNV 92

Query: 598  EXXXXXXXXXXXXXENAQDDQKEKGSGYVVRSKIKKAKRLSLDTRIELKKHNEENKSPLT 777
            E             +   +++ +     VVR++ KKAKRLSLD RI LK + +E     T
Sbjct: 93   EDIDSKIERVLRRRKKVSEERDDGNCDNVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQT 152

Query: 778  XXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKTLIQ 957
                           L+R+YS STDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMK L+Q
Sbjct: 153  QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 212

Query: 958  VKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1137
             KE L+ E+ +E T  EL +A NM ++QVR+ +EVGRAARNKLIKHNLRLVLFV+NKYFQ
Sbjct: 213  AKEDLK-EVDKEITGGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVINKYFQ 271

Query: 1138 EFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTRVSF 1317
            +F SGP+ QDLCQAGVKGLITAIDRFEPKR+ +LSTYS+FWIRH+I+RS+T+SSFTRV F
Sbjct: 272  DFASGPRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPF 331

Query: 1318 GLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRHAIT 1497
            GLE VRV+IQ+ KLKL FEL+R PTEEE+V+R+GIS ERY E+M+ASK ++SLHSRH  T
Sbjct: 332  GLERVRVDIQRTKLKLTFELQRSPTEEELVERIGISLERYHEVMKASKPILSLHSRHITT 391

Query: 1498 QEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGE 1677
            QEE INGITDV    GD RRQ A             KPKESLVIRQRYGLDGKGDRTLGE
Sbjct: 392  QEEYINGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGE 451

Query: 1678 IAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            IAGNLNISRE+VRKHEVKALMKLKHPAR+DYLRRY+
Sbjct: 452  IAGNLNISREIVRKHEVKALMKLKHPARLDYLRRYV 487


>ref|NP_001276145.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
            [Glycine max] gi|382365034|dbj|BAM05478.1| sigma-like
            factor 5B [Glycine max]
          Length = 507

 Score =  549 bits (1415), Expect = e-153
 Identities = 302/518 (58%), Positives = 362/518 (69%), Gaps = 4/518 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MGVVT SSSA+RTPLGL+ KF +++    KR  I+AFK ++                 +E
Sbjct: 1    MGVVTVSSSAARTPLGLNTKFCNNRL---KRPLIVAFKGDKHNDSALVATQEKIPVP-VE 56

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            T  + Q KR+        G    +    +SP + ++D+NEAAA LE++YKL  A D  E 
Sbjct: 57   TAKKTQKKRI--------GKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAEC 108

Query: 604  XXXXXXXXXXXXENAQDDQKEKG--SGYVVRS--KIKKAKRLSLDTRIELKKHNEENKSP 771
                        +   D+ +EK     +VVR+  K KK KRL+LD RI LK +   ++  
Sbjct: 109  IDGKIKRVSRRGKKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVI 168

Query: 772  LTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKTL 951
             T               L+R YS STD VSMDWK+M+IPPVL SSEHAWLFKLMQPMK L
Sbjct: 169  PTRKKRNVGNKIEKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKAL 228

Query: 952  IQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNKY 1131
            +QVKE LQ EL REP D EL +A NM + QVR+ ++VG+AARNKLIKHNLRLVLFV+NKY
Sbjct: 229  LQVKEDLQQELTREPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKY 288

Query: 1132 FQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTRV 1311
            F +F SGP+ QDLCQAGVKGLITAIDRFEP R+FRLSTYS+FWIRHAIIRSMT+S+FTRV
Sbjct: 289  FTDFASGPRFQDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRV 348

Query: 1312 SFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRHA 1491
             FGLESVR EIQKAK +L FEL+R PTEEEI++RV ISPERY ++++ASKS++SL+SRH 
Sbjct: 349  PFGLESVRAEIQKAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHT 408

Query: 1492 ITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTL 1671
             TQEE INGI D     GD R+QPA             KPKESLVIR R+GLDGKGDRTL
Sbjct: 409  TTQEEFINGIVDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRXRFGLDGKGDRTL 468

Query: 1672 GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            GEIAGNLNISREMVRKHEVKALMKLKH AR+DYLRRY+
Sbjct: 469  GEIAGNLNISREMVRKHEVKALMKLKHSARLDYLRRYV 506


>ref|XP_002331841.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  549 bits (1414), Expect = e-153
 Identities = 307/519 (59%), Positives = 363/519 (69%), Gaps = 5/519 (0%)
 Frame = +1

Query: 244  MGVVTASSSASRTPLGLDRKFPSSQSTSSKRLFILAFKTNRXXXXXXXXXXXXXXXXXIE 423
            MG+V+ SSSAS TPLG   KF + +ST+ KR  I+AFK ++                 IE
Sbjct: 1    MGIVSVSSSASWTPLGFSTKFSTCRSTA-KRPLIVAFKADKSNETALVAPHEQIPLP-IE 58

Query: 424  TTDEHQIKRLALVAQPSKGIIQAVSANVASPFTCELDFNEAAAKLESIYKLDSACDEQEX 603
            TT E   K+    ++ S   ++AV   V SP T  +D+NEAAAKLE+IYKL    D  + 
Sbjct: 59   TTKE---KKRRGKSKKSSDRLKAVRTEV-SPCTLGVDYNEAAAKLENIYKLSPGTDTSDV 114

Query: 604  XXXXXXXXXXXXENAQDDQKEKG-----SGYVVRSKIKKAKRLSLDTRIELKKHNEENKS 768
                           +  + EK      S  +VR++ KKAKRLSL  RI L+  ++E   
Sbjct: 115  EDVNGVIRRCRQRKRKTSECEKEDDGRTSKIIVRNQAKKAKRLSLQKRIALRIKSDEKLV 174

Query: 769  PLTXXXXXXXXXXXXXXXLVRNYSGSTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKT 948
                              LVR YS STDL S+DWKKMKIPPVL S+EHAWLFKLMQPMK 
Sbjct: 175  TSVGKRKGRKNENEKIDELVREYSSSTDLASLDWKKMKIPPVLTSAEHAWLFKLMQPMKA 234

Query: 949  LIQVKESLQTELGREPTDTELGEAVNMIVVQVRRHLEVGRAARNKLIKHNLRLVLFVMNK 1128
             +QVKE LQ   GREPT+ EL EA +M V+QVR+ +EVGRAARNKLIKHNLRLVLFV+NK
Sbjct: 235  SLQVKEHLQENSGREPTEGELAEATDMDVLQVRKQIEVGRAARNKLIKHNLRLVLFVINK 294

Query: 1129 YFQEFVSGPKCQDLCQAGVKGLITAIDRFEPKRKFRLSTYSVFWIRHAIIRSMTVSSFTR 1308
            YFQ++ +GP+ QDLCQAGVKGL+TAIDRFEPKR+FRLSTY +FWIRHAIIRSMT+SSFTR
Sbjct: 295  YFQDYANGPRYQDLCQAGVKGLMTAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFTR 354

Query: 1309 VSFGLESVRVEIQKAKLKLMFELKRIPTEEEIVKRVGISPERYQEIMRASKSVISLHSRH 1488
            VSFGLES+R EIQKAKL+L F+L R PT EEI+++VGIS ERY E+MRASK V+SLHSRH
Sbjct: 355  VSFGLESIRSEIQKAKLELWFQLLRKPTGEEIIEKVGISIERYHEVMRASKPVLSLHSRH 414

Query: 1489 AITQEELINGITDVHNAGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRT 1668
              TQEELI+G+ DV+  GGD RRQ A             KPKESLV+RQR+GLDGKGDRT
Sbjct: 415  KTTQEELISGVADVN--GGDDRRQSALLRLALDDVLDSLKPKESLVVRQRFGLDGKGDRT 472

Query: 1669 LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 1785
            LGEIAGNLNISREMVRKHE KALMKLKHP RVDYL RY+
Sbjct: 473  LGEIAGNLNISREMVRKHEAKALMKLKHPTRVDYLCRYV 511