BLASTX nr result
ID: Rheum21_contig00007506
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00007506
(506 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006407212.1| hypothetical protein EUTSA_v10020346mg [Eutr... 107 2e-21
ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutr... 107 2e-21
ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding pro... 107 2e-21
ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg... 107 2e-21
ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro... 107 2e-21
ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thali... 105 6e-21
ref|XP_006307049.1| hypothetical protein CARUB_v10008637mg [Caps... 105 6e-21
ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata] gi... 105 6e-21
dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana] 105 6e-21
ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidop... 104 1e-20
ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Caps... 104 1e-20
dbj|BAC43221.1| putative chaperonin 60 beta [Arabidopsis thaliana] 104 1e-20
ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding pro... 104 1e-20
gb|EOY32236.1| TCP-1/cpn60 chaperonin family protein [Theobroma ... 103 2e-20
ref|XP_006445574.1| hypothetical protein CICLE_v10014640mg [Citr... 102 4e-20
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit... 102 4e-20
ref|XP_002303983.1| chaperonin precursor family protein [Populus... 102 4e-20
ref|XP_002297617.1| hypothetical protein POPTR_0001s03980g [Popu... 102 4e-20
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro... 102 5e-20
ref|XP_004228946.1| PREDICTED: ruBisCO large subunit-binding pro... 102 7e-20
>ref|XP_006407212.1| hypothetical protein EUTSA_v10020346mg [Eutrema salsugineum]
gi|557108358|gb|ESQ48665.1| hypothetical protein
EUTSA_v10020346mg [Eutrema salsugineum]
Length = 596
Score = 107 bits (266), Expect = 2e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP PAGNPMDNSGYGY
Sbjct: 547 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY 596
>ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutrema salsugineum]
gi|557089212|gb|ESQ29920.1| hypothetical protein
EUTSA_v10011330mg [Eutrema salsugineum]
Length = 600
Score = 107 bits (266), Expect = 2e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP PAGNPMDNSGYGY
Sbjct: 551 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY 600
>ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 601
Score = 107 bits (266), Expect = 2e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP PAGNPMDNSGYGY
Sbjct: 552 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY 601
>ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding
protein subunit beta, chloroplastic-like [Cucumis
sativus]
Length = 608
Score = 107 bits (266), Expect = 2e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP PAGNPMDNSGYGY
Sbjct: 559 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY 608
>ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 107 bits (266), Expect = 2e-21
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP PAGNPMDNSGYGY
Sbjct: 559 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYGY 608
>ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thaliana]
gi|30695947|ref|NP_849811.1| chaperonin 60 subunit beta
1 [Arabidopsis thaliana]
gi|27735252|sp|P21240.3|CPNB1_ARATH RecName:
Full=Chaperonin 60 subunit beta 1, chloroplastic;
Short=CPN-60 beta 1; AltName: Full=60 kDa chaperonin
subunit beta 1; AltName: Full=RuBisCO large
subunit-binding protein subunit beta, chloroplastic;
Flags: Precursor gi|14423416|gb|AAK62390.1|AF386945_1
Rubisco subunit binding-protein beta subunit
[Arabidopsis thaliana] gi|4204266|gb|AAD10647.1| Rubisco
subunit binding-protein beta subunit [Arabidopsis
thaliana] gi|20148345|gb|AAM10063.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|222423239|dbj|BAH19596.1| AT1G55490 [Arabidopsis
thaliana] gi|332195130|gb|AEE33251.1| chaperonin 60
subunit beta 1 [Arabidopsis thaliana]
gi|332195131|gb|AEE33252.1| chaperonin 60 subunit beta 1
[Arabidopsis thaliana]
Length = 600
Score = 105 bits (262), Expect = 6e-21
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP P GNPMDNSGYGY
Sbjct: 551 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY 600
>ref|XP_006307049.1| hypothetical protein CARUB_v10008637mg [Capsella rubella]
gi|482575760|gb|EOA39947.1| hypothetical protein
CARUB_v10008637mg [Capsella rubella]
Length = 600
Score = 105 bits (262), Expect = 6e-21
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP P GNPMDNSGYGY
Sbjct: 551 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY 600
>ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata]
gi|297340348|gb|EFH70765.1| CPN60B [Arabidopsis lyrata
subsp. lyrata]
Length = 600
Score = 105 bits (262), Expect = 6e-21
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP P GNPMDNSGYGY
Sbjct: 551 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY 600
>dbj|BAH20275.1| AT1G55490 [Arabidopsis thaliana]
Length = 234
Score = 105 bits (262), Expect = 6e-21
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP P GNPMDNSGYGY
Sbjct: 185 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY 234
>ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]
gi|75311214|sp|Q9LJE4.1|CPNB2_ARATH RecName:
Full=Chaperonin 60 subunit beta 2, chloroplastic;
Short=CPN-60 beta 2; Flags: Precursor
gi|9280299|dbj|BAB01754.1| GloEL protein; chaperonin, 60
kDa [Arabidopsis thaliana] gi|332641841|gb|AEE75362.1|
TCP-1/cpn60 chaperonin family protein [Arabidopsis
thaliana]
Length = 596
Score = 104 bits (260), Expect = 1e-20
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEI EPEP PAGNPMDNSGYGY
Sbjct: 547 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY 596
>ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Capsella rubella]
gi|482565980|gb|EOA30169.1| hypothetical protein
CARUB_v10013285mg [Capsella rubella]
Length = 596
Score = 104 bits (260), Expect = 1e-20
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEI EPEP PAGNPMDNSGYGY
Sbjct: 547 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY 596
>dbj|BAC43221.1| putative chaperonin 60 beta [Arabidopsis thaliana]
Length = 55
Score = 104 bits (260), Expect = 1e-20
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEI EPEP PAGNPMDNSGYGY
Sbjct: 6 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY 55
>ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Glycine max]
Length = 591
Score = 104 bits (259), Expect = 1e-20
Identities = 48/49 (97%), Positives = 48/49 (97%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYG 358
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEP PAGNPMDNSGYG
Sbjct: 542 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYG 590
>gb|EOY32236.1| TCP-1/cpn60 chaperonin family protein [Theobroma cacao]
Length = 607
Score = 103 bits (257), Expect = 2e-20
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP PAGNPMD SGYGY
Sbjct: 558 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVPAGNPMDTSGYGY 607
>ref|XP_006445574.1| hypothetical protein CICLE_v10014640mg [Citrus clementina]
gi|568871557|ref|XP_006488950.1| PREDICTED: chaperonin
60 subunit beta 3, chloroplastic-like [Citrus sinensis]
gi|557548185|gb|ESR58814.1| hypothetical protein
CICLE_v10014640mg [Citrus clementina]
Length = 608
Score = 102 bits (255), Expect = 4e-20
Identities = 49/51 (96%), Positives = 50/51 (98%), Gaps = 1/51 (1%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPA-PAGNPMDNSGYGY 355
IDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEPA PAGNPMDNSGYGY
Sbjct: 558 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 608
>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative
[Ricinus communis] gi|223537354|gb|EEF38983.1| rubisco
subunit binding-protein beta subunit, rubb, putative
[Ricinus communis]
Length = 605
Score = 102 bits (255), Expect = 4e-20
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPE PAGNPMDNSGYGY
Sbjct: 556 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEAVPAGNPMDNSGYGY 605
>ref|XP_002303983.1| chaperonin precursor family protein [Populus trichocarpa]
gi|222841415|gb|EEE78962.1| chaperonin precursor family
protein [Populus trichocarpa]
Length = 607
Score = 102 bits (255), Expect = 4e-20
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPE PAGNPMDNSGYGY
Sbjct: 558 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPMDNSGYGY 607
>ref|XP_002297617.1| hypothetical protein POPTR_0001s03980g [Populus trichocarpa]
gi|118486341|gb|ABK95011.1| unknown [Populus
trichocarpa] gi|222844875|gb|EEE82422.1| hypothetical
protein POPTR_0001s03980g [Populus trichocarpa]
Length = 607
Score = 102 bits (255), Expect = 4e-20
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPE PAGNPMDNSGYGY
Sbjct: 558 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPMDNSGYGY 607
>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297746501|emb|CBI16557.3| unnamed protein product
[Vitis vinifera]
Length = 608
Score = 102 bits (254), Expect = 5e-20
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPEP AGNPMDNSGYGY
Sbjct: 559 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVVAGNPMDNSGYGY 608
>ref|XP_004228946.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Solanum lycopersicum]
Length = 599
Score = 102 bits (253), Expect = 7e-20
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3
Query: 504 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPAPAGNPMDNSGYGY 355
IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPE A AGNPMDNSGYGY
Sbjct: 550 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMDNSGYGY 599