BLASTX nr result
ID: Rheum21_contig00007505
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00007505
(489 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB55869.1| RuBisCO large subunit-binding protein subunit bet... 70 2e-10
ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidop... 70 2e-10
ref|XP_006407212.1| hypothetical protein EUTSA_v10020346mg [Eutr... 70 2e-10
ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutr... 70 2e-10
ref|XP_004498949.1| PREDICTED: ruBisCO large subunit-binding pro... 70 2e-10
ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Caps... 70 2e-10
ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding pro... 70 2e-10
ref|XP_004228946.1| PREDICTED: ruBisCO large subunit-binding pro... 70 2e-10
ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg... 70 2e-10
ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro... 70 2e-10
ref|NP_001275097.1| chaperonin-60 beta subunit [Solanum tuberosu... 70 2e-10
dbj|BAC43221.1| putative chaperonin 60 beta [Arabidopsis thaliana] 70 2e-10
ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding pro... 70 2e-10
ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding pro... 70 2e-10
emb|CAJ19275.1| beta chaperonin 60 [Solanum commersonii] 70 2e-10
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro... 69 5e-10
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit... 69 5e-10
ref|XP_002303983.1| chaperonin precursor family protein [Populus... 69 5e-10
ref|XP_002297617.1| hypothetical protein POPTR_0001s03980g [Popu... 69 5e-10
ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thali... 69 6e-10
>gb|EXB55869.1| RuBisCO large subunit-binding protein subunit beta [Morus
notabilis]
Length = 769
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/62 (59%), Positives = 38/62 (61%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNSXXXXXXXXGSCHRR 308
IDPTKVVRCCLEHA+SVAKTFLMSDC PAGNPMDNS R
Sbjct: 554 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPMDNSDEELGFAISESRLR 613
Query: 307 RE 302
RE
Sbjct: 614 RE 615
>ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]
gi|75311214|sp|Q9LJE4.1|CPNB2_ARATH RecName:
Full=Chaperonin 60 subunit beta 2, chloroplastic;
Short=CPN-60 beta 2; Flags: Precursor
gi|9280299|dbj|BAB01754.1| GloEL protein; chaperonin, 60
kDa [Arabidopsis thaliana] gi|332641841|gb|AEE75362.1|
TCP-1/cpn60 chaperonin family protein [Arabidopsis
thaliana]
Length = 596
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 547 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNS 592
>ref|XP_006407212.1| hypothetical protein EUTSA_v10020346mg [Eutrema salsugineum]
gi|557108358|gb|ESQ48665.1| hypothetical protein
EUTSA_v10020346mg [Eutrema salsugineum]
Length = 596
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 547 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNS 592
>ref|XP_006392634.1| hypothetical protein EUTSA_v10011330mg [Eutrema salsugineum]
gi|557089212|gb|ESQ29920.1| hypothetical protein
EUTSA_v10011330mg [Eutrema salsugineum]
Length = 600
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 551 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNS 596
>ref|XP_004498949.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Cicer arietinum]
Length = 592
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/46 (73%), Positives = 34/46 (73%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC AGNPMDNS
Sbjct: 543 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVVAGNPMDNS 588
>ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Capsella rubella]
gi|482565980|gb|EOA30169.1| hypothetical protein
CARUB_v10013285mg [Capsella rubella]
Length = 596
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 547 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNS 592
>ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 601
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 552 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNS 597
>ref|XP_004228946.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Solanum lycopersicum]
Length = 599
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/46 (73%), Positives = 34/46 (73%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC AGNPMDNS
Sbjct: 550 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMDNS 595
>ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding
protein subunit beta, chloroplastic-like [Cucumis
sativus]
Length = 608
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 559 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNS 604
>ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Cucumis sativus]
Length = 608
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 559 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNS 604
>ref|NP_001275097.1| chaperonin-60 beta subunit [Solanum tuberosum]
gi|1762130|gb|AAB39827.1| chaperonin-60 beta subunit
[Solanum tuberosum]
Length = 599
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/46 (73%), Positives = 34/46 (73%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC AGNPMDNS
Sbjct: 550 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMDNS 595
>dbj|BAC43221.1| putative chaperonin 60 beta [Arabidopsis thaliana]
Length = 55
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 6 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNS 51
>ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic-like [Glycine max]
Length = 591
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 542 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNS 587
>ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Glycine max]
Length = 592
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/46 (76%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC PAGNPMDNS
Sbjct: 543 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAIPAGNPMDNS 588
>emb|CAJ19275.1| beta chaperonin 60 [Solanum commersonii]
Length = 600
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/46 (73%), Positives = 34/46 (73%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC AGNPMDNS
Sbjct: 551 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMDNS 596
>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297746501|emb|CBI16557.3| unnamed protein product
[Vitis vinifera]
Length = 608
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/46 (71%), Positives = 34/46 (73%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHA+SVAKTFLMSDC AGNPMDNS
Sbjct: 559 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVVAGNPMDNS 604
>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative
[Ricinus communis] gi|223537354|gb|EEF38983.1| rubisco
subunit binding-protein beta subunit, rubb, putative
[Ricinus communis]
Length = 605
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/46 (73%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHA+SVAKTFLMSDC PAGNPMDNS
Sbjct: 556 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEAVPAGNPMDNS 601
>ref|XP_002303983.1| chaperonin precursor family protein [Populus trichocarpa]
gi|222841415|gb|EEE78962.1| chaperonin precursor family
protein [Populus trichocarpa]
Length = 607
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/46 (73%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHA+SVAKTFLMSDC PAGNPMDNS
Sbjct: 558 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPMDNS 603
>ref|XP_002297617.1| hypothetical protein POPTR_0001s03980g [Populus trichocarpa]
gi|118486341|gb|ABK95011.1| unknown [Populus
trichocarpa] gi|222844875|gb|EEE82422.1| hypothetical
protein POPTR_0001s03980g [Populus trichocarpa]
Length = 607
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/46 (73%), Positives = 35/46 (76%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHA+SVAKTFLMSDC PAGNPMDNS
Sbjct: 558 IDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPMDNS 603
>ref|NP_175945.1| chaperonin 60 subunit beta 1 [Arabidopsis thaliana]
gi|30695947|ref|NP_849811.1| chaperonin 60 subunit beta
1 [Arabidopsis thaliana]
gi|27735252|sp|P21240.3|CPNB1_ARATH RecName:
Full=Chaperonin 60 subunit beta 1, chloroplastic;
Short=CPN-60 beta 1; AltName: Full=60 kDa chaperonin
subunit beta 1; AltName: Full=RuBisCO large
subunit-binding protein subunit beta, chloroplastic;
Flags: Precursor gi|14423416|gb|AAK62390.1|AF386945_1
Rubisco subunit binding-protein beta subunit
[Arabidopsis thaliana] gi|4204266|gb|AAD10647.1| Rubisco
subunit binding-protein beta subunit [Arabidopsis
thaliana] gi|20148345|gb|AAM10063.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|222423239|dbj|BAH19596.1| AT1G55490 [Arabidopsis
thaliana] gi|332195130|gb|AEE33251.1| chaperonin 60
subunit beta 1 [Arabidopsis thaliana]
gi|332195131|gb|AEE33252.1| chaperonin 60 subunit beta 1
[Arabidopsis thaliana]
Length = 600
Score = 68.9 bits (167), Expect = 6e-10
Identities = 34/46 (73%), Positives = 34/46 (73%)
Frame = -3
Query: 487 IDPTKVVRCCLEHAASVAKTFLMSDCXXXXXXXXXXXPAGNPMDNS 350
IDPTKVVRCCLEHAASVAKTFLMSDC P GNPMDNS
Sbjct: 551 IDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNS 596