BLASTX nr result
ID: Rheum21_contig00007192
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00007192
(240 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri... 82 6e-14
ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 82 1e-13
gb|AFK40024.1| unknown [Medicago truncatula] 80 3e-13
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|5... 80 3e-13
gb|ACJ85486.1| unknown [Medicago truncatula] 80 3e-13
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides] 80 3e-13
ref|XP_003612875.1| 31 kDa ribonucleoprotein [Medicago truncatul... 80 3e-13
gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma c... 78 1e-12
gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma c... 78 1e-12
gb|ESW30286.1| hypothetical protein PHAVU_002G140400g [Phaseolus... 78 1e-12
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 77 2e-12
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 77 2e-12
gb|AFK48727.1| unknown [Lotus japonicus] 75 7e-12
gb|AFK40547.1| unknown [Lotus japonicus] 75 7e-12
ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycin... 75 7e-12
ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 75 9e-12
emb|CBI33876.3| unnamed protein product [Vitis vinifera] 75 9e-12
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 75 9e-12
ref|XP_004512519.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 74 2e-11
ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr... 74 3e-11
>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 278
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/81 (50%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+++F +CG VT +E+IK GR +G+AFVT+ + E AQAAIDKL+ E+S R+I+VE+A
Sbjct: 99 IKNLFGQCGTVTDVEIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFA 158
Query: 58 KALKPQT--SVPSDAIRETPH 2
K LKP + S + RET H
Sbjct: 159 KRLKPPSPPSPTGTSARETRH 179
>ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I D+FA+CG VT +E+IK GR KGYAFVTM + E AQAA+DK + E+S R+I+VE A
Sbjct: 89 ITDLFAQCGTVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELA 148
Query: 58 KALKPQTSVP 29
K LK S+P
Sbjct: 149 KRLKKPPSLP 158
>gb|AFK40024.1| unknown [Medicago truncatula]
Length = 324
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG V +E+IK G+ KGY FVTM++ E AQAA+DK N TEIS R+++VE+A
Sbjct: 112 IKDLFGQCGTVIDVEIIKSKDGKGKGYTFVTMDSGEGAQAAVDKFNATEISGRILRVEFA 171
Query: 58 KAL-KPQTSVPSDAIRE 11
K KP+ P+ +E
Sbjct: 172 KGFKKPRPPPPAPTPKE 188
>ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|566146773|ref|XP_006368391.1| 33 kDa
ribonucleoprotein [Populus trichocarpa]
gi|550346304|gb|ERP64960.1| 33 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 294
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG V+ +E+IK GR +G+AFVTM T E AQAAIDK N E+S R+I+VE+A
Sbjct: 110 IKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFA 169
Query: 58 KALKPQTSVPSDAIRETP 5
K L+ PS + TP
Sbjct: 170 KRLR---RPPSPRLPGTP 184
>gb|ACJ85486.1| unknown [Medicago truncatula]
Length = 213
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG V +E+IK G+ KGY FVTM++ E AQAA+DK N TEIS R+++VE+A
Sbjct: 112 IKDLFGQCGTVIDVEIIKSKDGKGKGYTFVTMDSGEGAQAAVDKFNATEISGRILRVEFA 171
Query: 58 KAL-KPQTSVPSDAIRE 11
K KP+ P+ +E
Sbjct: 172 KGFKKPRPPPPAPTPKE 188
>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG V+ +E+IK GR +G+AFVTM T E AQAAIDK N E+S R+I+VE+A
Sbjct: 110 IKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSGRIIRVEFA 169
Query: 58 KALKPQTSVPSDAIRETP 5
K L+ PS + TP
Sbjct: 170 KRLR---RPPSPRLPGTP 184
>ref|XP_003612875.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355514210|gb|AES95833.1| 31 kDa ribonucleoprotein
[Medicago truncatula]
Length = 324
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG V +E+IK G+ KGY FVTM++ E AQAA+DK N TEIS R+++VE+A
Sbjct: 112 IKDLFGQCGTVIDVEIIKSKDGKGKGYTFVTMDSGEGAQAAVDKFNATEISGRILRVEFA 171
Query: 58 KAL-KPQTSVPSDAIRE 11
K KP+ P+ +E
Sbjct: 172 KGFKKPRPPPPAPTPKE 188
>gb|EOY23976.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 248
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG VT +E+IK GR + +AFVTM + E AQAA+DKL+ E+S R+I+VE+A
Sbjct: 104 IKDLFGQCGNVTDVEIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFA 163
Query: 58 KALKPQTSVPSDAI--RETPH 2
+ K + P + RET H
Sbjct: 164 RRFKKPSPSPQPIVPPRETHH 184
>gb|EOY23975.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 281
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG VT +E+IK GR + +AFVTM + E AQAA+DKL+ E+S R+I+VE+A
Sbjct: 104 IKDLFGQCGNVTDVEIIKQKDGRSRNFAFVTMASGEEAQAAVDKLDSHEVSARIIRVEFA 163
Query: 58 KALKPQTSVPSDAI--RETPH 2
+ K + P + RET H
Sbjct: 164 RRFKKPSPSPQPIVPPRETHH 184
>gb|ESW30286.1| hypothetical protein PHAVU_002G140400g [Phaseolus vulgaris]
Length = 290
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+ +FA+CG VT +E+I++ +GR GYAFVTM++ E AQ A+DK + +E+S R+I+VE A
Sbjct: 95 IKGIFAQCGTVTDVEIIRNRKGRHMGYAFVTMDSGEEAQVAVDKFDSSELSGRIIRVELA 154
Query: 58 KALK-----PQTSVPSDAIRETPH 2
K K P P RET H
Sbjct: 155 KTFKKPPPPPPPPPPPPQPRETRH 178
>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+++F +CG V+ +E+IK GR +G+AFVTM +P+ AQAAI K + EIS RVIKVE+A
Sbjct: 110 IKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFA 169
Query: 58 KALK 47
K LK
Sbjct: 170 KRLK 173
>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+++F +CG V+ +E+IK GR +G+AFVTM +P+ AQAAI K + EIS RVIKVE+A
Sbjct: 104 IKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFA 163
Query: 58 KALK 47
K LK
Sbjct: 164 KRLK 167
>gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG VT +E+I+ GR KGYAFVTM + E AQAA+DK + E+S R+++VE A
Sbjct: 102 IKDLFGQCGTVTDVEIIRGKDGRGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELA 161
Query: 58 KALK------PQTSVPSDA 20
K K P + PS+A
Sbjct: 162 KRFKKPSPPGPPSPPPSEA 180
>gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+F +CG VT +E+I+ GR KGYAFVTM + E AQAA+DK + E+S R+++VE A
Sbjct: 102 IKDLFGQCGTVTDVEIIRGKDGRGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELA 161
Query: 58 KALK------PQTSVPSDA 20
K K P + PS+A
Sbjct: 162 KRFKKPSPPGPPSPPPSEA 180
>ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I D+FA+ G VT +E+IK GR KGYAFVTM + E AQAA+DK + E+S R+I+VE A
Sbjct: 96 INDLFAQSGTVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELA 155
Query: 58 KALKPQTSVP 29
K K S P
Sbjct: 156 KRFKKPPSPP 165
>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 285
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/70 (51%), Positives = 50/70 (71%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+++FAECG V +E+IK G+ +G+AFVTM + E AQAAIDKL+ E+S R+I+VE+A
Sbjct: 106 IKNIFAECGIVDDVEIIKTKDGKSRGFAFVTMSSGEEAQAAIDKLDSYEVSGRIIRVEFA 165
Query: 58 KALKPQTSVP 29
K K P
Sbjct: 166 KRFKKPPGAP 175
>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+++F ECG VT +E+IK GR +GYAFVTM++ E AQA ++K + E+S R+I+VE+A
Sbjct: 75 IKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFA 134
Query: 58 KALKPQTSVP 29
K K + P
Sbjct: 135 KRFKKPSPPP 144
>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/70 (48%), Positives = 50/70 (71%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+++F ECG VT +E+IK GR +GYAFVTM++ E AQA ++K + E+S R+I+VE+A
Sbjct: 105 IKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFA 164
Query: 58 KALKPQTSVP 29
K K + P
Sbjct: 165 KRFKKPSPPP 174
>ref|XP_004512519.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Cicer
arietinum]
Length = 278
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+D+FA+CG V +E+IK G+ +GYAFVTM++ E A+AA+DK + IS R+I+VE+A
Sbjct: 96 IKDLFAQCGTVIDVEIIKSKDGKGRGYAFVTMDSGEEAKAAVDKFDAYVISGRIIRVEFA 155
Query: 58 KALKPQTSVPS 26
K K PS
Sbjct: 156 KRFKKPPPPPS 166
>ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina]
gi|567871683|ref|XP_006428431.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|567871685|ref|XP_006428432.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|568877400|ref|XP_006491727.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1|
PREDICTED: ribonucleoprotein At2g37220,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877404|ref|XP_006491729.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1|
hypothetical protein CICLE_v10012439mg [Citrus
clementina] gi|557530488|gb|ESR41671.1| hypothetical
protein CICLE_v10012439mg [Citrus clementina]
gi|557530489|gb|ESR41672.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
Length = 275
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Frame = -3
Query: 238 IRDMFAECGPVTQIEMIKDNRGRFKGYAFVTMETPEAAQAAIDKLNFTEISERVIKVEYA 59
I+++FA CG V +E+IK G+ + +AFVTM +PE AQAA+++ + E+S R+I+VE+A
Sbjct: 95 IKNLFAPCGTVVDVEIIKHKGGKNRNFAFVTMASPEEAQAAVNQFDTQEVSGRIIRVEFA 154
Query: 58 KALK---PQTSVPSDAIRETPH 2
K K PQ S + A RET H
Sbjct: 155 KKFKKPRPQRSASAPA-RETQH 175