BLASTX nr result

ID: Rheum21_contig00007173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00007173
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ18808.1| hypothetical protein PRUPE_ppa017043mg [Prunus pe...    58   1e-06
gb|EMJ17636.1| hypothetical protein PRUPE_ppa021853mg [Prunus pe...    58   1e-06
ref|XP_004301822.1| PREDICTED: F-box protein CPR30-like [Fragari...    56   4e-06
ref|XP_004308449.1| PREDICTED: F-box protein CPR30-like [Fragari...    55   7e-06
ref|XP_004308451.1| PREDICTED: F-box protein CPR30-like [Fragari...    55   1e-05

>gb|EMJ18808.1| hypothetical protein PRUPE_ppa017043mg [Prunus persica]
          Length = 379

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +2

Query: 20  SGGDGSRYIPDELLDKILVSLPVKSLIRFQLVCKTWQSMIHARSFIDSYGRR 175
           SG +GS YIP+E+L  IL  LPVKSLIRF  VCK W S+I +  FI  +  R
Sbjct: 4   SGCNGSHYIPEEILINILSRLPVKSLIRFICVCKLWSSLIRSSRFIGMHLNR 55


>gb|EMJ17636.1| hypothetical protein PRUPE_ppa021853mg [Prunus persica]
          Length = 334

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +2

Query: 20  SGGDGSRYIPDELLDKILVSLPVKSLIRFQLVCKTWQSMIHARSFIDSYGRR 175
           SG +GS YIP+E+L  IL  LPVKSLIRF  VCK W S+I +  FI  +  R
Sbjct: 4   SGCNGSHYIPEEILINILSRLPVKSLIRFICVCKLWSSLIRSSRFIGMHLNR 55


>ref|XP_004301822.1| PREDICTED: F-box protein CPR30-like [Fragaria vesca subsp. vesca]
          Length = 390

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/45 (51%), Positives = 35/45 (77%)
 Frame = +2

Query: 41  YIPDELLDKILVSLPVKSLIRFQLVCKTWQSMIHARSFIDSYGRR 175
           ++P+E++ +IL+ LP KSL+RF  VCK+W SMI   SFID++ +R
Sbjct: 5   FVPEEIIHEILLRLPAKSLVRFSTVCKSWSSMITRSSFIDTHLKR 49


>ref|XP_004308449.1| PREDICTED: F-box protein CPR30-like [Fragaria vesca subsp. vesca]
          Length = 268

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 22/42 (52%), Positives = 34/42 (80%)
 Frame = +2

Query: 41  YIPDELLDKILVSLPVKSLIRFQLVCKTWQSMIHARSFIDSY 166
           Y+P+E+++K+L+ LPVK+LIRF  VCK+W S I A +F+ S+
Sbjct: 4   YLPEEIIEKVLLRLPVKTLIRFTTVCKSWLSKIKASTFVQSH 45


>ref|XP_004308451.1| PREDICTED: F-box protein CPR30-like [Fragaria vesca subsp. vesca]
          Length = 228

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/44 (52%), Positives = 35/44 (79%)
 Frame = +2

Query: 35  SRYIPDELLDKILVSLPVKSLIRFQLVCKTWQSMIHARSFIDSY 166
           S + P+E+L+KIL+ LPVK+LI+F  VCK+W S+I A +F+ S+
Sbjct: 2   SDFFPEEILEKILLRLPVKTLIKFTTVCKSWLSLIKASTFVQSH 45


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