BLASTX nr result
ID: Rheum21_contig00006980
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00006980
(248 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2... 154 9e-36
ref|XP_004252275.1| PREDICTED: geranylgeranyl transferase type-2... 154 1e-35
ref|XP_004235781.1| PREDICTED: geranylgeranyl transferase type-2... 154 1e-35
ref|XP_006341510.1| PREDICTED: geranylgeranyl transferase type-2... 152 4e-35
ref|XP_006341509.1| PREDICTED: geranylgeranyl transferase type-2... 152 4e-35
ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2... 150 1e-34
ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycin... 149 5e-34
gb|AAQ62584.1| putative Rab geranylgeranyl transferase type II b... 149 5e-34
gb|EXB61345.1| Geranylgeranyl transferase type-2 subunit beta [M... 147 1e-33
gb|EPS71823.1| hypothetical protein M569_02935 [Genlisea aurea] 145 5e-33
ref|XP_006288088.1| hypothetical protein CARUB_v10001318mg [Caps... 145 5e-33
ref|XP_006288087.1| hypothetical protein CARUB_v10001318mg [Caps... 145 5e-33
ref|XP_004504351.1| PREDICTED: geranylgeranyl transferase type-2... 144 9e-33
ref|XP_002871518.1| beta subunit of rab geranylgeranyltransferas... 144 9e-33
gb|EXC04276.1| Geranylgeranyl transferase type-2 subunit beta [M... 144 1e-32
ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2... 144 1e-32
dbj|BAB10039.1| Rab geranylgeranyltransferase, beta subunit [Ara... 143 2e-32
ref|XP_003524939.2| PREDICTED: LOW QUALITY PROTEIN: geranylgeran... 143 2e-32
gb|EOY19312.1| RAB geranylgeranyl transferase beta subunit 1 [Th... 143 2e-32
ref|NP_974770.1| RAB geranylgeranyl transferase beta subunit 1 [... 143 2e-32
>ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
vinifera] gi|147860391|emb|CAN82570.1| hypothetical
protein VITISV_016117 [Vitis vinifera]
gi|296090220|emb|CBI40039.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 154 bits (390), Expect = 9e-36
Identities = 69/82 (84%), Positives = 79/82 (96%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD+ ESVVMEHLRMNGAYWGLTTLD+L KL++VD+DE+ISW+MECQHESGGFGGN+GHD
Sbjct: 23 RKDNFESVVMEHLRMNGAYWGLTTLDLLGKLDMVDEDEIISWVMECQHESGGFGGNVGHD 82
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVLALFDK++ L
Sbjct: 83 PHILYTLSAVQVLALFDKLNVL 104
>ref|XP_004252275.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
[Solanum lycopersicum]
Length = 315
Score = 154 bits (389), Expect = 1e-35
Identities = 69/82 (84%), Positives = 77/82 (93%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD+ ESVVMEHLR+NGAYWGLTTLDIL KL+ VDQDEVISW+M+CQHE GGFGGNIGHD
Sbjct: 19 RKDNFESVVMEHLRLNGAYWGLTTLDILGKLDAVDQDEVISWVMQCQHEDGGFGGNIGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PH+LYTLSA+QVLALFDK+H L
Sbjct: 79 PHMLYTLSAIQVLALFDKLHVL 100
>ref|XP_004235781.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
[Solanum lycopersicum]
Length = 313
Score = 154 bits (389), Expect = 1e-35
Identities = 69/82 (84%), Positives = 76/82 (92%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD ESVVMEHLR+NGAYWGLTTLDI+ KL V+QDEVISW+M+CQHESGGFGGNIGHD
Sbjct: 19 RKDDFESVVMEHLRLNGAYWGLTTLDIMGKLGAVEQDEVISWVMQCQHESGGFGGNIGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PH+LYTLSA+QVLALFDKIH L
Sbjct: 79 PHVLYTLSAIQVLALFDKIHVL 100
>ref|XP_006341510.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
isoform X2 [Solanum tuberosum]
Length = 313
Score = 152 bits (384), Expect = 4e-35
Identities = 68/82 (82%), Positives = 77/82 (93%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD ESVVMEHLR+NGAYWGLTTLDI+ KL+ V+QDEVISW+M+CQHESGGFGGNIGHD
Sbjct: 19 RKDDFESVVMEHLRLNGAYWGLTTLDIMGKLSAVEQDEVISWVMQCQHESGGFGGNIGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PH+LYTLSA+QVLALFDKI+ L
Sbjct: 79 PHVLYTLSAIQVLALFDKIYVL 100
>ref|XP_006341509.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
isoform X1 [Solanum tuberosum]
Length = 340
Score = 152 bits (384), Expect = 4e-35
Identities = 68/82 (82%), Positives = 77/82 (93%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD ESVVMEHLR+NGAYWGLTTLDI+ KL+ V+QDEVISW+M+CQHESGGFGGNIGHD
Sbjct: 19 RKDDFESVVMEHLRLNGAYWGLTTLDIMGKLSAVEQDEVISWVMQCQHESGGFGGNIGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PH+LYTLSA+QVLALFDKI+ L
Sbjct: 79 PHVLYTLSAIQVLALFDKIYVL 100
>ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
vinifera] gi|147821440|emb|CAN74579.1| hypothetical
protein VITISV_024797 [Vitis vinifera]
gi|296081232|emb|CBI17976.3| unnamed protein product
[Vitis vinifera]
Length = 317
Score = 150 bits (380), Expect = 1e-34
Identities = 68/82 (82%), Positives = 76/82 (92%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD ESVV EHLRMNGAYWGLTTLD+L KL +VDQDEV+SW+MECQHESGGFGGNIGHD
Sbjct: 23 RKDDFESVVTEHLRMNGAYWGLTTLDLLGKLEIVDQDEVVSWVMECQHESGGFGGNIGHD 82
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHI++TLSAVQVLALFDK++ L
Sbjct: 83 PHIVHTLSAVQVLALFDKLNVL 104
>ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycine max]
gi|255635594|gb|ACU18147.1| unknown [Glycine max]
Length = 317
Score = 149 bits (375), Expect = 5e-34
Identities = 67/82 (81%), Positives = 76/82 (92%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD+ ESVVMEHLRMNGAYWGLTTLD+L KL+ VD DEV+SW+M CQHESGGFGGN+GHD
Sbjct: 19 RKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSWLMSCQHESGGFGGNVGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVLALFDK++ +
Sbjct: 79 PHILYTLSAVQVLALFDKLNVI 100
>gb|AAQ62584.1| putative Rab geranylgeranyl transferase type II beta subunit
[Glycine max]
Length = 317
Score = 149 bits (375), Expect = 5e-34
Identities = 67/82 (81%), Positives = 76/82 (92%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD+ ESVVMEHLRMNGAYWGLTTLD+L KL+ VD DEV+SW+M CQHESGGFGGN+GHD
Sbjct: 19 RKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSWLMSCQHESGGFGGNVGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVLALFDK++ +
Sbjct: 79 PHILYTLSAVQVLALFDKLNVI 100
>gb|EXB61345.1| Geranylgeranyl transferase type-2 subunit beta [Morus notabilis]
Length = 372
Score = 147 bits (372), Expect = 1e-33
Identities = 67/82 (81%), Positives = 76/82 (92%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+KDS ESVVMEHLR+NGAYWGLTTLD+L+KL+ VD DEV+SWI+ CQHESGGFGGN+GHD
Sbjct: 78 KKDSFESVVMEHLRINGAYWGLTTLDLLEKLHAVDVDEVVSWIISCQHESGGFGGNVGHD 137
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVLALFDK+ L
Sbjct: 138 PHILYTLSAVQVLALFDKLAIL 159
>gb|EPS71823.1| hypothetical protein M569_02935 [Genlisea aurea]
Length = 130
Score = 145 bits (366), Expect = 5e-33
Identities = 63/82 (76%), Positives = 76/82 (92%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+KD ESVVMEH+R+NGAYWGLTTLDI+ KLN VDQ+EV+SW++ECQHESGGFGGNIGHD
Sbjct: 19 KKDVFESVVMEHIRLNGAYWGLTTLDIIGKLNAVDQEEVVSWVLECQHESGGFGGNIGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PH+L+TLSA+QVLALF+K+ L
Sbjct: 79 PHVLFTLSAIQVLALFNKMDVL 100
>ref|XP_006288088.1| hypothetical protein CARUB_v10001318mg [Capsella rubella]
gi|482556794|gb|EOA20986.1| hypothetical protein
CARUB_v10001318mg [Capsella rubella]
Length = 347
Score = 145 bits (366), Expect = 5e-33
Identities = 66/82 (80%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+K+SLESVVM+HLRMNGAYWGLTTLD+LDKL V +DEV+SW+M CQHESGGF GN GHD
Sbjct: 53 KKESLESVVMDHLRMNGAYWGLTTLDLLDKLGTVPEDEVLSWVMTCQHESGGFAGNTGHD 112
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQ+LALFDKI L
Sbjct: 113 PHILYTLSAVQILALFDKISIL 134
>ref|XP_006288087.1| hypothetical protein CARUB_v10001318mg [Capsella rubella]
gi|482556793|gb|EOA20985.1| hypothetical protein
CARUB_v10001318mg [Capsella rubella]
Length = 346
Score = 145 bits (366), Expect = 5e-33
Identities = 66/82 (80%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+K+SLESVVM+HLRMNGAYWGLTTLD+LDKL V +DEV+SW+M CQHESGGF GN GHD
Sbjct: 52 KKESLESVVMDHLRMNGAYWGLTTLDLLDKLGTVPEDEVLSWVMTCQHESGGFAGNTGHD 111
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQ+LALFDKI L
Sbjct: 112 PHILYTLSAVQILALFDKISIL 133
>ref|XP_004504351.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
[Cicer arietinum]
Length = 313
Score = 144 bits (364), Expect = 9e-33
Identities = 65/82 (79%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+KDS ESVVMEHLRMNGAYWGLT LD+L KL+ +D DEV+SWIM CQHESGGFGGN+GHD
Sbjct: 19 KKDSFESVVMEHLRMNGAYWGLTALDLLGKLDTLDVDEVVSWIMSCQHESGGFGGNVGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVLALF+K+ +
Sbjct: 79 PHILYTLSAVQVLALFNKLDVI 100
>ref|XP_002871518.1| beta subunit of rab geranylgeranyltransferase [Arabidopsis lyrata
subsp. lyrata] gi|297317355|gb|EFH47777.1| beta subunit
of rab geranylgeranyltransferase [Arabidopsis lyrata
subsp. lyrata]
Length = 313
Score = 144 bits (364), Expect = 9e-33
Identities = 65/82 (79%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+K+S ESVVM+HLRMNGAYWGLTTLD+LDKL V +DEV+SW+M CQHESGGF GN GHD
Sbjct: 19 KKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEDEVVSWLMTCQHESGGFAGNTGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQ+LALFDKI+ L
Sbjct: 79 PHILYTLSAVQILALFDKINIL 100
>gb|EXC04276.1| Geranylgeranyl transferase type-2 subunit beta [Morus notabilis]
Length = 372
Score = 144 bits (363), Expect = 1e-32
Identities = 66/82 (80%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+KDS ESVVMEHLRMNGAYWGLTTLD+L KL+ VD DEV+SWI+ CQHESGGFGGN+GHD
Sbjct: 78 KKDSFESVVMEHLRMNGAYWGLTTLDLLGKLHAVDVDEVVSWIISCQHESGGFGGNVGHD 137
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVLAL +K+ L
Sbjct: 138 PHILYTLSAVQVLALLNKLGVL 159
>ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
[Cucumis sativus] gi|449490992|ref|XP_004158768.1|
PREDICTED: geranylgeranyl transferase type-2 subunit
beta-like [Cucumis sativus]
Length = 317
Score = 144 bits (363), Expect = 1e-32
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+KD +SVVMEHLRMNGAYWGLT LDIL KL+ VD DEV+SW+M CQHESGGF GN+GHD
Sbjct: 19 KKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWVMSCQHESGGFSGNVGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVLALFDK+ L
Sbjct: 79 PHILYTLSAVQVLALFDKLDVL 100
>dbj|BAB10039.1| Rab geranylgeranyltransferase, beta subunit [Arabidopsis thaliana]
gi|21594047|gb|AAM65965.1| Rab
geranylgeranyltransferase, beta subunit [Arabidopsis
thaliana]
Length = 313
Score = 143 bits (361), Expect = 2e-32
Identities = 65/82 (79%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+K+S ESVVM+HLRMNGAYWGLTTLD+LDKL V ++EVISW+M CQHESGGF GN GHD
Sbjct: 19 KKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQ+LALFDKI+ L
Sbjct: 79 PHILYTLSAVQILALFDKINIL 100
>ref|XP_003524939.2| PREDICTED: LOW QUALITY PROTEIN: geranylgeranyl transferase type-2
subunit beta-like [Glycine max]
Length = 323
Score = 143 bits (361), Expect = 2e-32
Identities = 64/82 (78%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKD+ ESVVMEHLRMNGAYWGLTTLD+L KL+ VD DEV+SW+M CQH+SGGFGGN+ HD
Sbjct: 19 RKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHTVDVDEVVSWLMSCQHDSGGFGGNVEHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQVL+LFDK+ +
Sbjct: 79 PHILYTLSAVQVLSLFDKLDVI 100
>gb|EOY19312.1| RAB geranylgeranyl transferase beta subunit 1 [Theobroma cacao]
Length = 315
Score = 143 bits (361), Expect = 2e-32
Identities = 66/82 (80%), Positives = 75/82 (91%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
RKDS ESVVM+HLR+NGAYWGLTTLD+L KL+ V+ DEVISWIM+CQHESGGF GNIGHD
Sbjct: 19 RKDSFESVVMDHLRLNGAYWGLTTLDLLGKLDTVNADEVISWIMKCQHESGGFAGNIGHD 78
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYT+SAVQVLALF+K+ L
Sbjct: 79 PHILYTVSAVQVLALFNKLDVL 100
>ref|NP_974770.1| RAB geranylgeranyl transferase beta subunit 1 [Arabidopsis
thaliana] gi|332004392|gb|AED91775.1| RAB geranylgeranyl
transferase beta subunit 1 [Arabidopsis thaliana]
Length = 320
Score = 143 bits (361), Expect = 2e-32
Identities = 65/82 (79%), Positives = 74/82 (90%)
Frame = -2
Query: 247 RKDSLESVVMEHLRMNGAYWGLTTLDILDKLNVVDQDEVISWIMECQHESGGFGGNIGHD 68
+K+S ESVVM+HLRMNGAYWGLTTLD+LDKL V ++EVISW+M CQHESGGF GN GHD
Sbjct: 26 KKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHD 85
Query: 67 PHILYTLSAVQVLALFDKIHTL 2
PHILYTLSAVQ+LALFDKI+ L
Sbjct: 86 PHILYTLSAVQILALFDKINIL 107