BLASTX nr result
ID: Rheum21_contig00006966
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00006966
(1104 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004496579.1| PREDICTED: cleavage and polyadenylation spec... 380 e-103
ref|XP_002321911.1| hypothetical protein POPTR_0015s13200g [Popu... 379 e-102
gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus... 378 e-102
gb|AFK44906.1| unknown [Medicago truncatula] 378 e-102
ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation spec... 377 e-102
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec... 377 e-102
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin... 376 e-102
ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation spec... 375 e-101
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p... 375 e-101
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec... 374 e-101
ref|XP_002869668.1| hypothetical protein ARALYDRAFT_492272 [Arab... 374 e-101
ref|NP_001148753.1| LOC100282369 [Zea mays] gi|195621890|gb|ACG3... 374 e-101
ref|NP_194285.2| cleavage/polyadenylation specificity factor [Ar... 373 e-101
ref|XP_006653045.1| PREDICTED: cleavage and polyadenylation spec... 373 e-101
ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citr... 373 e-101
ref|XP_004234388.1| PREDICTED: cleavage and polyadenylation spec... 373 e-101
ref|XP_006413296.1| hypothetical protein EUTSA_v10026280mg [Eutr... 372 e-100
ref|XP_006284555.1| hypothetical protein CARUB_v10005772mg [Caps... 372 e-100
ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation spec... 372 e-100
gb|ADT92189.1| cleavage and polyadenylation specificity factor 5... 372 e-100
>ref|XP_004496579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cicer arietinum]
Length = 202
Score = 380 bits (977), Expect = e-103
Identities = 180/201 (89%), Positives = 191/201 (95%)
Frame = +2
Query: 143 MVAPSSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQE 322
MV+ S VVN YPLSSY+FGTKEPKMEKDTSVADRLARMK+NYMKEGMRTSVEGILLVQE
Sbjct: 1 MVSAQSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKLNYMKEGMRTSVEGILLVQE 60
Query: 323 HNHPHILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVAN 502
HNHPHILLLQIGNTFCKLPGGRLKPGENEV+GLKRKL+SKLGANS L P+WQ+GECVA
Sbjct: 61 HNHPHILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGANSAALVPDWQIGECVAI 120
Query: 503 WWRPNFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQR 682
WWRPNFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQR
Sbjct: 121 WWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQR 180
Query: 683 YGPVISTIPQQLSRFNFKMIT 745
YGPVISTIPQQLSRF FKMIT
Sbjct: 181 YGPVISTIPQQLSRFQFKMIT 201
>ref|XP_002321911.1| hypothetical protein POPTR_0015s13200g [Populus trichocarpa]
gi|118487488|gb|ABK95571.1| unknown [Populus
trichocarpa] gi|222868907|gb|EEF06038.1| hypothetical
protein POPTR_0015s13200g [Populus trichocarpa]
Length = 202
Score = 379 bits (973), Expect = e-102
Identities = 179/201 (89%), Positives = 189/201 (94%)
Frame = +2
Query: 143 MVAPSSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQE 322
MV S+VVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQE
Sbjct: 1 MVGAGSAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQE 60
Query: 323 HNHPHILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVAN 502
HNHPHILLLQIGNTFCKLPGGRLKPGENE++GLKRKL+SKLGANS L P+WQ+GECVA
Sbjct: 61 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAT 120
Query: 503 WWRPNFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQR 682
WWRPNFET++YPYCPPHITKPKECKKLY+VHL EREYFAVPKNLKLLAVPLFELYDNVQR
Sbjct: 121 WWRPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPLFELYDNVQR 180
Query: 683 YGPVISTIPQQLSRFNFKMIT 745
YGPVISTIPQQLSRF F MIT
Sbjct: 181 YGPVISTIPQQLSRFQFNMIT 201
>gb|ESW19694.1| hypothetical protein PHAVU_006G147400g [Phaseolus vulgaris]
Length = 200
Score = 378 bits (970), Expect = e-102
Identities = 179/197 (90%), Positives = 189/197 (95%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
SS VVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP
Sbjct: 3 SSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKL+SKLGANS L P+WQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEMEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF FKMIT
Sbjct: 183 ISTIPQQLSRFQFKMIT 199
>gb|AFK44906.1| unknown [Medicago truncatula]
Length = 200
Score = 378 bits (970), Expect = e-102
Identities = 178/196 (90%), Positives = 188/196 (95%)
Frame = +2
Query: 158 SSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 337
S VVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH
Sbjct: 4 SQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 63
Query: 338 ILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRPN 517
ILLLQIGNTFCKLPGGRLKPGENE++GLKRKL+SKLGANS L P+WQ+GECVA WWRPN
Sbjct: 64 ILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWWRPN 123
Query: 518 FETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 697
FET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPVI
Sbjct: 124 FETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183
Query: 698 STIPQQLSRFNFKMIT 745
STIPQQLSRF FKMIT
Sbjct: 184 STIPQQLSRFQFKMIT 199
>ref|XP_006353309.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like isoform X1 [Solanum tuberosum]
gi|565373499|ref|XP_006353310.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X2 [Solanum tuberosum]
gi|565373501|ref|XP_006353311.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X3 [Solanum tuberosum]
gi|565373503|ref|XP_006353312.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
isoform X4 [Solanum tuberosum]
Length = 200
Score = 377 bits (967), Expect = e-102
Identities = 177/196 (90%), Positives = 187/196 (95%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
+SSVVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNY KEGMRTSVEGILLVQEHNHP
Sbjct: 3 TSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKLSSKL ANS +QPNWQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMI 742
ISTIPQQLSRF F MI
Sbjct: 183 ISTIPQQLSRFQFNMI 198
>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5 isoform 1 [Vitis vinifera]
gi|297745235|emb|CBI40315.3| unnamed protein product
[Vitis vinifera]
Length = 200
Score = 377 bits (967), Expect = e-102
Identities = 178/197 (90%), Positives = 188/197 (95%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
+S VVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHNHP
Sbjct: 3 TSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKLSSKL ANSL LQP+WQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL+IVHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF F M+T
Sbjct: 183 ISTIPQQLSRFQFNMMT 199
>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
gi|255627433|gb|ACU14061.1| unknown [Glycine max]
Length = 200
Score = 376 bits (966), Expect = e-102
Identities = 179/197 (90%), Positives = 188/197 (95%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
SS VVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP
Sbjct: 3 SSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE +GLKRKL+SKLGANS L P+WQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENENEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF FKMIT
Sbjct: 183 ISTIPQQLSRFQFKMIT 199
>ref|XP_004308094.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Fragaria vesca subsp. vesca]
Length = 200
Score = 375 bits (962), Expect = e-101
Identities = 175/197 (88%), Positives = 189/197 (95%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
+S++VN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHNHP
Sbjct: 3 TSAMVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKL+SKLGANS NL P+WQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSANLVPDWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF F MI+
Sbjct: 183 ISTIPQQLSRFQFNMIS 199
>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
factor im, 25kD subunit, putative [Ricinus communis]
Length = 200
Score = 375 bits (962), Expect = e-101
Identities = 177/197 (89%), Positives = 188/197 (95%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
+SSVVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHNHP
Sbjct: 3 NSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKL+SKLGANS L P+WQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF F MIT
Sbjct: 183 ISTIPQQLSRFQFNMIT 199
>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Cucumis sativus]
gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Cucumis sativus]
Length = 200
Score = 374 bits (960), Expect = e-101
Identities = 176/197 (89%), Positives = 188/197 (95%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
+S VVN YPLSSY+FGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEH HP
Sbjct: 3 TSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHKHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKL+SKLGANS +LQP+WQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL+IVHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF F MIT
Sbjct: 183 ISTIPQQLSRFQFNMIT 199
>ref|XP_002869668.1| hypothetical protein ARALYDRAFT_492272 [Arabidopsis lyrata subsp.
lyrata] gi|297315504|gb|EFH45927.1| hypothetical protein
ARALYDRAFT_492272 [Arabidopsis lyrata subsp. lyrata]
Length = 200
Score = 374 bits (959), Expect = e-101
Identities = 175/196 (89%), Positives = 187/196 (95%)
Frame = +2
Query: 158 SSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 337
S VVN YPLS+YSFGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVEGILLVQEHNHPH
Sbjct: 4 SQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPH 63
Query: 338 ILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRPN 517
ILLLQIGNTFCKLPGGRLKPGENEVDGLKRKL+SKLG NS L P+W+VGECVA WWRPN
Sbjct: 64 ILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLTSKLGGNSAALVPDWKVGECVATWWRPN 123
Query: 518 FETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 697
FETM+YPYCPPHITKPKECK+L+IVHL E+EYFAVPKNLKLLAVPLFELYDNVQRYGPVI
Sbjct: 124 FETMMYPYCPPHITKPKECKRLFIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183
Query: 698 STIPQQLSRFNFKMIT 745
STIPQQLSRF+F MI+
Sbjct: 184 STIPQQLSRFHFNMIS 199
>ref|NP_001148753.1| LOC100282369 [Zea mays] gi|195621890|gb|ACG32775.1| cleavage and
polyadenylation specificity factor 5 [Zea mays]
gi|224032173|gb|ACN35162.1| unknown [Zea mays]
gi|413920017|gb|AFW59949.1| cleavage and polyadenylation
specificity factor 5 isoform 1 [Zea mays]
gi|413920018|gb|AFW59950.1| cleavage and polyadenylation
specificity factor 5 isoform 2 [Zea mays]
Length = 202
Score = 374 bits (959), Expect = e-101
Identities = 175/201 (87%), Positives = 189/201 (94%)
Frame = +2
Query: 143 MVAPSSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQE 322
MV+ SSSVVNVYPL++Y+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQE
Sbjct: 1 MVSSSSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQE 60
Query: 323 HNHPHILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVAN 502
HNHPHILLLQIGNTFCKLPGGRLKPGENE++GLKRKL SKL NS + PNWQVGECVA
Sbjct: 61 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAV 120
Query: 503 WWRPNFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQR 682
WWRPNFET++YPYCPPHITKPKECKKL+IVHL EREYFAVP+NLKLLAVPLFELYDN+QR
Sbjct: 121 WWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQR 180
Query: 683 YGPVISTIPQQLSRFNFKMIT 745
YGPVISTIPQQLSRF F M++
Sbjct: 181 YGPVISTIPQQLSRFQFNMVS 201
>ref|NP_194285.2| cleavage/polyadenylation specificity factor [Arabidopsis thaliana]
gi|26451195|dbj|BAC42701.1| unknown protein [Arabidopsis
thaliana] gi|28973229|gb|AAO63939.1| unknown protein
[Arabidopsis thaliana] gi|110736890|dbj|BAF00402.1|
hypothetical protein [Arabidopsis thaliana]
gi|332659676|gb|AEE85076.1| cleavage/polyadenylation
specificity factor [Arabidopsis thaliana]
Length = 200
Score = 373 bits (957), Expect = e-101
Identities = 175/196 (89%), Positives = 185/196 (94%)
Frame = +2
Query: 158 SSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 337
S VVN YPLS+YSFGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVEGILLVQEHNHPH
Sbjct: 4 SQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPH 63
Query: 338 ILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRPN 517
ILLLQIGNTFCKLPGGRLKPGENE DGLKRKL+SKLG NS L P+W VGECVA WWRPN
Sbjct: 64 ILLLQIGNTFCKLPGGRLKPGENEADGLKRKLTSKLGGNSAALVPDWTVGECVATWWRPN 123
Query: 518 FETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 697
FETM+YPYCPPHITKPKECK+LYIVHL E+EYFAVPKNLKLLAVPLFELYDNVQRYGPVI
Sbjct: 124 FETMMYPYCPPHITKPKECKRLYIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183
Query: 698 STIPQQLSRFNFKMIT 745
STIPQQLSRF+F MI+
Sbjct: 184 STIPQQLSRFHFNMIS 199
>ref|XP_006653045.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Oryza brachyantha]
Length = 202
Score = 373 bits (957), Expect = e-101
Identities = 176/201 (87%), Positives = 188/201 (93%)
Frame = +2
Query: 143 MVAPSSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQE 322
MV SSSVVNVYPL++Y+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQE
Sbjct: 1 MVNSSSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQE 60
Query: 323 HNHPHILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVAN 502
HNHPHILLLQIGNTFCKLPGGRLKPGENE++GLKRKL SKL NS + PNWQVGECVA
Sbjct: 61 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAV 120
Query: 503 WWRPNFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQR 682
WWRPNFET++YPYCPPHITKPKECKKL+IVHL EREYFAVP+NLKLLAVPLFELYDNVQR
Sbjct: 121 WWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNVQR 180
Query: 683 YGPVISTIPQQLSRFNFKMIT 745
YGPVISTIPQQLSRF F M++
Sbjct: 181 YGPVISTIPQQLSRFQFNMVS 201
>ref|XP_006421904.1| hypothetical protein CICLE_v10005929mg [Citrus clementina]
gi|568874546|ref|XP_006490376.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 5-like
[Citrus sinensis] gi|557523777|gb|ESR35144.1|
hypothetical protein CICLE_v10005929mg [Citrus
clementina]
Length = 200
Score = 373 bits (957), Expect = e-101
Identities = 176/197 (89%), Positives = 187/197 (94%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
+S VVN YPLSSY+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHNHP
Sbjct: 3 TSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKL+SKLGANS L P+WQ+GECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF F MIT
Sbjct: 183 ISTIPQQLSRFQFNMIT 199
>ref|XP_004234388.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Solanum lycopersicum]
Length = 200
Score = 373 bits (957), Expect = e-101
Identities = 176/196 (89%), Positives = 186/196 (94%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
++SVVN YPLSSY+FGTKE KMEKDTSVADRLARMKVNY KEGMRTSVEGILLVQEHNHP
Sbjct: 3 TTSVVNTYPLSSYTFGTKETKMEKDTSVADRLARMKVNYTKEGMRTSVEGILLVQEHNHP 62
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE++GLKRKLSSKL ANS +QPNWQVGECVA WWRP
Sbjct: 63 HILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGIQPNWQVGECVAIWWRP 122
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL++VHL EREYFAVPKNLKLLAVPLFELYDNVQRYGPV
Sbjct: 123 NFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 182
Query: 695 ISTIPQQLSRFNFKMI 742
ISTIPQQLSRF F MI
Sbjct: 183 ISTIPQQLSRFQFNMI 198
>ref|XP_006413296.1| hypothetical protein EUTSA_v10026280mg [Eutrema salsugineum]
gi|557114466|gb|ESQ54749.1| hypothetical protein
EUTSA_v10026280mg [Eutrema salsugineum]
Length = 200
Score = 372 bits (956), Expect = e-100
Identities = 175/196 (89%), Positives = 187/196 (95%)
Frame = +2
Query: 158 SSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 337
S VVN YPLS+YSFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH
Sbjct: 4 SQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 63
Query: 338 ILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRPN 517
ILLLQIGNTFCKLPGGRLKPGENEV+GLKRKL+SKLG NS L P+W+VGECVA WWRPN
Sbjct: 64 ILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAALVPDWKVGECVATWWRPN 123
Query: 518 FETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 697
FETM+YPYCPPHITKPKECK+L+IVHL E+EYFAVPKNLKLLAVPLFELYDNVQRYGPVI
Sbjct: 124 FETMMYPYCPPHITKPKECKRLFIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183
Query: 698 STIPQQLSRFNFKMIT 745
STIPQQLSRF+F MI+
Sbjct: 184 STIPQQLSRFHFNMIS 199
>ref|XP_006284555.1| hypothetical protein CARUB_v10005772mg [Capsella rubella]
gi|482553260|gb|EOA17453.1| hypothetical protein
CARUB_v10005772mg [Capsella rubella]
Length = 200
Score = 372 bits (955), Expect = e-100
Identities = 174/196 (88%), Positives = 187/196 (95%)
Frame = +2
Query: 158 SSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHPH 337
S VVN YPLS+YSFGTKEPK+EKDTSVADRLARMK+NYMKEGMRTSVEGILLVQEHNHPH
Sbjct: 4 SQVVNTYPLSNYSFGTKEPKLEKDTSVADRLARMKINYMKEGMRTSVEGILLVQEHNHPH 63
Query: 338 ILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRPN 517
ILLLQIGNTFCKLPGGRLKPGENEV+GLKRKL+SKLG NS L P+W+VGECVA WWRPN
Sbjct: 64 ILLLQIGNTFCKLPGGRLKPGENEVEGLKRKLTSKLGGNSAALVPDWKVGECVATWWRPN 123
Query: 518 FETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPVI 697
FETM+YPYCPPHITKPKECK+L+IVHL E+EYFAVPKNLKLLAVPLFELYDNVQRYGPVI
Sbjct: 124 FETMMYPYCPPHITKPKECKRLFIVHLSEKEYFAVPKNLKLLAVPLFELYDNVQRYGPVI 183
Query: 698 STIPQQLSRFNFKMIT 745
STIPQQLSRF+F MI+
Sbjct: 184 STIPQQLSRFHFNMIS 199
>ref|XP_003580856.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
5-like [Brachypodium distachyon]
Length = 203
Score = 372 bits (955), Expect = e-100
Identities = 175/197 (88%), Positives = 186/197 (94%)
Frame = +2
Query: 155 SSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHNHP 334
SSSVVNVYPL++Y+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHNHP
Sbjct: 6 SSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHNHP 65
Query: 335 HILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVANWWRP 514
HILLLQIGNTFCKLPGGRLKPGENE+DGLKRKL SKL NS + PNWQVGECVA WWRP
Sbjct: 66 HILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRP 125
Query: 515 NFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQRYGPV 694
NFET++YPYCPPHITKPKECKKL+IVHL EREYFAVP+NLKLLAVPLFELYDNVQRYGPV
Sbjct: 126 NFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQRYGPV 185
Query: 695 ISTIPQQLSRFNFKMIT 745
ISTIPQQLSRF F M++
Sbjct: 186 ISTIPQQLSRFQFNMVS 202
>gb|ADT92189.1| cleavage and polyadenylation specificity factor 5 [Zea mays]
Length = 223
Score = 372 bits (955), Expect = e-100
Identities = 175/199 (87%), Positives = 187/199 (93%)
Frame = +2
Query: 143 MVAPSSSVVNVYPLSSYSFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQE 322
MV+ SSSVVNVYPL++Y+FGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQE
Sbjct: 1 MVSSSSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQE 60
Query: 323 HNHPHILLLQIGNTFCKLPGGRLKPGENEVDGLKRKLSSKLGANSLNLQPNWQVGECVAN 502
HNHPHILLLQIGNTFCKLPGGRLKPGENE++GLKRKL SKL NS + PNWQVGECVA
Sbjct: 61 HNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAV 120
Query: 503 WWRPNFETMLYPYCPPHITKPKECKKLYIVHLPEREYFAVPKNLKLLAVPLFELYDNVQR 682
WWRPNFET++YPYCPPHITKPKECKKL+IVHL EREYFAVP+NLKLLAVPLFELYDN+QR
Sbjct: 121 WWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPRNLKLLAVPLFELYDNIQR 180
Query: 683 YGPVISTIPQQLSRFNFKM 739
YGPVISTIPQQLSRF F M
Sbjct: 181 YGPVISTIPQQLSRFQFNM 199