BLASTX nr result

ID: Rheum21_contig00006864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006864
         (322 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ02390.1| hypothetical protein PRUPE_ppa002757mg [Prunus pe...    82   1e-13
ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cuc...    67   2e-09
ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221...    67   2e-09
ref|XP_004290306.1| PREDICTED: uncharacterized protein LOC101300...    64   2e-08
ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu...    59   9e-07

>gb|EMJ02390.1| hypothetical protein PRUPE_ppa002757mg [Prunus persica]
          Length = 636

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
 Frame = +2

Query: 2   WDQTNS--STVPPQPQNTGYNAYGQHPVQPTSTPPSAGYNYSQVPPSSTYNYNQGYAQQP 175
           WDQ+N   S+ PPQ +++ YN YGQ P    S PP+  YNY+Q PP +++ Y+QGYAQQP
Sbjct: 318 WDQSNQVPSSQPPQ-ESSAYNYYGQQPPMG-SAPPNPSYNYNQTPPVASHGYDQGYAQQP 375

Query: 176 P-YGQDTASTQPPATGHEQQKQYA 244
           P YGQ+ +S  P   G +QQ+QYA
Sbjct: 376 PSYGQNISSQAP---GSDQQQQYA 396


>ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
          Length = 516

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   WDQTNSSTVPPQPQNTGYNAYGQHPVQPTSTPPSAGYNYSQVPPSSTYNYNQGYAQQ-PP 178
           WDQ+N STV P  Q+TGYN YGQ     ++ P    Y+Y Q   S T+ Y+Q Y+QQ P 
Sbjct: 316 WDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQYHDYSYGQPASSGTHGYDQSYSQQAPS 375

Query: 179 YGQDTASTQPPATGHEQQKQY 241
           YGQ      PP+  ++QQ  Y
Sbjct: 376 YGQ-----IPPS--YDQQNMY 389


>ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
          Length = 516

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   WDQTNSSTVPPQPQNTGYNAYGQHPVQPTSTPPSAGYNYSQVPPSSTYNYNQGYAQQ-PP 178
           WDQ+N STV P  Q+TGYN YGQ     ++ P    Y+Y Q   S T+ Y+Q Y+QQ P 
Sbjct: 316 WDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQFHDYSYGQPASSGTHGYDQSYSQQAPS 375

Query: 179 YGQDTASTQPPATGHEQQKQY 241
           YGQ      PP+  ++QQ  Y
Sbjct: 376 YGQ-----IPPS--YDQQNMY 389


>ref|XP_004290306.1| PREDICTED: uncharacterized protein LOC101300491 [Fragaria vesca
           subsp. vesca]
          Length = 563

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
 Frame = +2

Query: 2   WDQTNSSTVPPQPQNTGYNAYGQHPVQPTSTPPSAGYN-----YSQVPPS-------STY 145
           WDQ+N     P   ++GYN YGQ P   ++ P  A YN     Y+Q PPS          
Sbjct: 317 WDQSNQVPSQPPQDSSGYNYYGQQPPMGSAPPNPAYYNQTSQGYAQQPPSYDQGYAQQPP 376

Query: 146 NYNQGYAQQPPYGQDTASTQPPATGH--------EQQKQYADP 250
           +Y+Q YAQQPP    +   QPP  GH          Q+QY  P
Sbjct: 377 SYDQSYAQQPPSYDQSYGQQPPHYGHNISSQAPASDQQQYGTP 419


>ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
           gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1,
           putative [Ricinus communis]
          Length = 544

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   WDQTNSSTVPPQPQNTGYNAYGQHPVQPTSTPPSAGYNYSQVPPSSTYNYNQGYAQQPP- 178
           WDQ+N +T+    Q  GY  YGQ P Q  S P ++ YN  Q PP ++  Y   Y+QQ   
Sbjct: 313 WDQSNPTTMSQTQQMAGYGYYGQQP-QMGSAPLNSSYN--QTPPVASSGYGNSYSQQTSN 369

Query: 179 YGQDTASTQPPATGHEQQKQYADPN 253
           YGQ+ +S  P     EQQ+ YA  N
Sbjct: 370 YGQNISSQTPTL---EQQRPYATSN 391


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