BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006628
         (752 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   288   1e-75
gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus pe...   273   4e-71
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   266   4e-69
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...   266   4e-69
gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative ...   264   2e-68
gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative ...   264   2e-68
gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative ...   264   2e-68
gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative ...   264   2e-68
gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative ...   264   2e-68
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...   261   1e-67
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   251   1e-64
ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Popu...   249   5e-64
ref|XP_002329296.1| predicted protein [Populus trichocarpa]           249   5e-64
ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron sp...   244   3e-62
ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron sp...   241   1e-61
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp...   241   2e-61
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp...   241   2e-61
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp...   241   2e-61
ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [A...   238   2e-60
ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   238   2e-60

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  288 bits (738), Expect = 1e-75
 Identities = 151/270 (55%), Positives = 182/270 (67%), Gaps = 20/270 (7%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           ++PW+  E+  VFRRTK E V TAAEL+LD  LL RLRGEA KMR WVKV KAGVTE+V+
Sbjct: 175 KMPWLKTEK-VVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVV 233

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
            ++H VW ++EL M++  +PLCRNMDRAREI+E KT GLV+WSKKD LV YRG +Y+   
Sbjct: 234 DQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTS 293

Query: 362 IHKNAGR----------QKSLNMA----------IKHLELEQSDASSQEGVDEQMGGYGI 481
            H    R             LN +          IK  E    +   ++  +E     GI
Sbjct: 294 KHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGI 353

Query: 482 FMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRL 661
           FM       P++ SLYERE DRLL+GLGPRF+DWW PKPLPVDADLLPEV+ GF+ PFRL
Sbjct: 354 FMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRL 413

Query: 662 PPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
            PP+TR KLTDDELTYLRK A+ LPTHFVL
Sbjct: 414 SPPQTRSKLTDDELTYLRKLAYALPTHFVL 443


>gb|EMJ18512.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score =  273 bits (698), Expect = 4e-71
 Identities = 146/269 (54%), Positives = 181/269 (67%), Gaps = 19/269 (7%)
 Frame = +2

Query: 2    RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
            ++PW  +ER  VF+R K + V +AAELSL++ELL RLR EA KMR WVKV KAGVT+A++
Sbjct: 212  KMPWERDER-IVFQRIKKKRVASAAELSLEKELLERLRAEAAKMRKWVKVKKAGVTQAIV 270

Query: 182  KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
             ++  +W  NEL M++  +PLCRNM RA+EIVE KTGG+VVW KKD LV YRGC+Y+   
Sbjct: 271  DDIKFIWKTNELAMVKFDVPLCRNMHRAQEIVETKTGGMVVWGKKDTLVIYRGCNYQSSS 330

Query: 362  IH------KNAGRQKSLNMAIKHLELEQSDA----SSQEGVDEQMG---------GYGIF 484
                     +A RQ++L+      +LE++ +    S +  VDE+M            G F
Sbjct: 331  KFFPKMRPCSADRQETLSSDHMQPDLEENSSYQYKSFESPVDEKMSRKDAEEDCIQSGTF 390

Query: 485  MGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLP 664
                    P  RSLYE+E DRLL+GLGPRF+DWW  KPLPVDADLLPEVV GFK P R  
Sbjct: 391  QETSMSCQPTSRSLYEKEADRLLDGLGPRFIDWWMHKPLPVDADLLPEVVPGFKAPIRRC 450

Query: 665  PPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
            PP TR KLTDDELT+LRKFA  LPTHFVL
Sbjct: 451  PPHTRSKLTDDELTFLRKFARSLPTHFVL 479


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568857343|ref|XP_006482226.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  266 bits (681), Expect = 4e-69
 Identities = 147/264 (55%), Positives = 175/264 (66%), Gaps = 14/264 (5%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           ++PW+ E+R  VFRR K E + T AE  LD ELL RL+ EARKMR WVKV KAGVTE+V+
Sbjct: 154 KVPWLREDR-FVFRRMKKERMVTKAETMLDGELLERLKDEARKMRKWVKVKKAGVTESVV 212

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
            E+   W  NEL M++  +PLCRNMDRAREI+E KTGGLV+W+KKD  V YRG D  +  
Sbjct: 213 FEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRG-DSSKSS 271

Query: 362 IH---KNAGRQKSLNMAIKHLELEQS-DASSQEGVDEQMGGYGIFMGGEAGQVP------ 511
           +    ++A  Q++      HL LE+  + S  +     +        GE   +P      
Sbjct: 272 VKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTSIFMD 331

Query: 512 ----IDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTR 679
               ID+SLYEREGDRLL+GLGPRFVDWW  KPLPVD DLLPEVV GFK PFRL PP  R
Sbjct: 332 KNLRIDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDAR 391

Query: 680 PKLTDDELTYLRKFAFYLPTHFVL 751
            KLTDDELTYLRK A  LPTHFVL
Sbjct: 392 SKLTDDELTYLRKLAHPLPTHFVL 415


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
           gi|557532797|gb|ESR43980.1| hypothetical protein
           CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score =  266 bits (681), Expect = 4e-69
 Identities = 147/264 (55%), Positives = 175/264 (66%), Gaps = 14/264 (5%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           ++PW+ EER  VFRR K E + T AE  LD EL+ RL+ EARKMR WVKV KAGVTE+V+
Sbjct: 160 KVPWLREER-FVFRRMKKERMVTKAETMLDGELIERLKDEARKMRKWVKVKKAGVTESVV 218

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
            E+   W  NEL M++  +PLCRNMDRAREI+E KTGGLV+W+KKD  V YRG D  +  
Sbjct: 219 FEIRLAWRRNELAMVKFDVPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRG-DGSKSS 277

Query: 362 IH---KNAGRQKSLNMAIKHLELEQS-DASSQEGVDEQMGGYGIFMGGEAGQVP------ 511
           +    ++A  Q++      HL LE+  + S  +     +        GE   +P      
Sbjct: 278 VKMCPRSADDQEAPLSKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTSIFMD 337

Query: 512 ----IDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTR 679
               ID+SLYEREGDRLL+GLGPRFVDWW  KPLPVD DLLPEVV GFK PFRL PP  R
Sbjct: 338 KNLRIDKSLYEREGDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDAR 397

Query: 680 PKLTDDELTYLRKFAFYLPTHFVL 751
            KLTDDELTYLRK A  LPTHFVL
Sbjct: 398 SKLTDDELTYLRKLAHPLPTHFVL 421


>gb|EOY04147.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
            cacao]
          Length = 788

 Score =  264 bits (675), Expect = 2e-68
 Identities = 138/270 (51%), Positives = 174/270 (64%), Gaps = 20/270 (7%)
 Frame = +2

Query: 2    RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
            ++PW+ EE + VFRR K E + T AE+SLD++LL RLR +A +MR W+KV K GVT+AV+
Sbjct: 191  KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 250

Query: 182  KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDY---- 349
             E+   W  NELVM++ G+PLCRNMDRAREI+E KT GLVVW KKD LV YRGC +    
Sbjct: 251  DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 310

Query: 350  --ERGQIHKNAGRQKSLNMAIKHL--------ELEQSDASS------QEGVDEQMGGYGI 481
                 +  + A  Q+  +    HL         LE+ + S+      +E  +++     I
Sbjct: 311  KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 370

Query: 482  FMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRL 661
            FM  +    P+  SLYERE DRLL+GLGPRF+DWW  KPLP+DADLLPE V GF+ P RL
Sbjct: 371  FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 430

Query: 662  PPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
             PP TRP LTDDEL YLRK    LP HF L
Sbjct: 431  SPPNTRPNLTDDELKYLRKLTHPLPFHFAL 460


>gb|EOY04146.1| maize chloroplast splicing factor CRS1, putative isoform 4
           [Theobroma cacao]
          Length = 767

 Score =  264 bits (675), Expect = 2e-68
 Identities = 138/270 (51%), Positives = 174/270 (64%), Gaps = 20/270 (7%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           ++PW+ EE + VFRR K E + T AE+SLD++LL RLR +A +MR W+KV K GVT+AV+
Sbjct: 165 KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 224

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDY---- 349
            E+   W  NELVM++ G+PLCRNMDRAREI+E KT GLVVW KKD LV YRGC +    
Sbjct: 225 DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 284

Query: 350 --ERGQIHKNAGRQKSLNMAIKHL--------ELEQSDASS------QEGVDEQMGGYGI 481
                +  + A  Q+  +    HL         LE+ + S+      +E  +++     I
Sbjct: 285 KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 344

Query: 482 FMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRL 661
           FM  +    P+  SLYERE DRLL+GLGPRF+DWW  KPLP+DADLLPE V GF+ P RL
Sbjct: 345 FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 404

Query: 662 PPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
            PP TRP LTDDEL YLRK    LP HF L
Sbjct: 405 SPPNTRPNLTDDELKYLRKLTHPLPFHFAL 434


>gb|EOY04145.1| maize chloroplast splicing factor CRS1, putative isoform 3
           [Theobroma cacao]
          Length = 788

 Score =  264 bits (675), Expect = 2e-68
 Identities = 138/270 (51%), Positives = 174/270 (64%), Gaps = 20/270 (7%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           ++PW+ EE + VFRR K E + T AE+SLD++LL RLR +A +MR W+KV K GVT+AV+
Sbjct: 165 KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 224

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDY---- 349
            E+   W  NELVM++ G+PLCRNMDRAREI+E KT GLVVW KKD LV YRGC +    
Sbjct: 225 DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 284

Query: 350 --ERGQIHKNAGRQKSLNMAIKHL--------ELEQSDASS------QEGVDEQMGGYGI 481
                +  + A  Q+  +    HL         LE+ + S+      +E  +++     I
Sbjct: 285 KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 344

Query: 482 FMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRL 661
           FM  +    P+  SLYERE DRLL+GLGPRF+DWW  KPLP+DADLLPE V GF+ P RL
Sbjct: 345 FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 404

Query: 662 PPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
            PP TRP LTDDEL YLRK    LP HF L
Sbjct: 405 SPPNTRPNLTDDELKYLRKLTHPLPFHFAL 434


>gb|EOY04144.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  264 bits (675), Expect = 2e-68
 Identities = 138/270 (51%), Positives = 174/270 (64%), Gaps = 20/270 (7%)
 Frame = +2

Query: 2    RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
            ++PW+ EE + VFRR K E + T AE+SLD++LL RLR +A +MR W+KV K GVT+AV+
Sbjct: 191  KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 250

Query: 182  KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDY---- 349
             E+   W  NELVM++ G+PLCRNMDRAREI+E KT GLVVW KKD LV YRGC +    
Sbjct: 251  DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 310

Query: 350  --ERGQIHKNAGRQKSLNMAIKHL--------ELEQSDASS------QEGVDEQMGGYGI 481
                 +  + A  Q+  +    HL         LE+ + S+      +E  +++     I
Sbjct: 311  KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 370

Query: 482  FMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRL 661
            FM  +    P+  SLYERE DRLL+GLGPRF+DWW  KPLP+DADLLPE V GF+ P RL
Sbjct: 371  FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 430

Query: 662  PPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
             PP TRP LTDDEL YLRK    LP HF L
Sbjct: 431  SPPNTRPNLTDDELKYLRKLTHPLPFHFAL 460


>gb|EOY04143.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  264 bits (675), Expect = 2e-68
 Identities = 138/270 (51%), Positives = 174/270 (64%), Gaps = 20/270 (7%)
 Frame = +2

Query: 2    RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
            ++PW+ EE + VFRR K E + T AE+SLD++LL RLR +A +MR W+KV K GVT+AV+
Sbjct: 191  KMPWLREEEKVVFRRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVV 250

Query: 182  KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDY---- 349
             E+   W  NELVM++ G+PLCRNMDRAREI+E KT GLVVW KKD LV YRGC +    
Sbjct: 251  DEIKLAWRKNELVMVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTS 310

Query: 350  --ERGQIHKNAGRQKSLNMAIKHL--------ELEQSDASS------QEGVDEQMGGYGI 481
                 +  + A  Q+  +    HL         LE+ + S+      +E  +++     I
Sbjct: 311  KISSMKYPRCADGQEISSSTFSHLTSSNNINMSLEKFNGSTLQSGLYREDREKESMPINI 370

Query: 482  FMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRL 661
            FM  +    P+  SLYERE DRLL+GLGPRF+DWW  KPLP+DADLLPE V GF+ P RL
Sbjct: 371  FMKEDENNQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRL 430

Query: 662  PPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
             PP TRP LTDDEL YLRK    LP HF L
Sbjct: 431  SPPNTRPNLTDDELKYLRKLTHPLPFHFAL 460


>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score =  261 bits (668), Expect = 1e-67
 Identities = 138/259 (53%), Positives = 169/259 (65%), Gaps = 9/259 (3%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           ++PW SE R  V+RR K E V   AE +LD  LL RLRGEA +++ WVKV KAGVT  V+
Sbjct: 214 KMPWESEVR-IVYRRMKKEKVVMTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVV 272

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
            ++H +W NNEL ML+  LPLCRNMDRAREIVE KTGG VVW K++ LV YRGC Y   Q
Sbjct: 273 DQIHFIWKNNELAMLKFDLPLCRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSYTLQQ 332

Query: 362 ---------IHKNAGRQKSLNMAIKHLELEQSDASSQEGVDEQMGGYGIFMGGEAGQVPI 514
                     H+N+   +++        L  S +S  E +             E   + +
Sbjct: 333 KELQHDFLCSHQNSSFTENIKQTSIFSPLNSSGSSEDEMIS--------VGNSEEDSLAM 384

Query: 515 DRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTD 694
           + SLY RE +RLL+ LGPR+VDWW+PKPLPV+ADLLPEVV GFK PFRL PP++R KLTD
Sbjct: 385 NESLYVREANRLLDDLGPRYVDWWWPKPLPVNADLLPEVVPGFKPPFRLCPPRSRSKLTD 444

Query: 695 DELTYLRKFAFYLPTHFVL 751
           DELT LRK A  LPTHFVL
Sbjct: 445 DELTQLRKLARSLPTHFVL 463


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
           gi|223544130|gb|EEF45655.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 742

 Score =  251 bits (642), Expect = 1e-64
 Identities = 138/248 (55%), Positives = 166/248 (66%)
 Frame = +2

Query: 8   PWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVLKE 187
           PW  EE+  V+ R K E   T AEL L++ELL  LR EA KMR WVKV KAGVT++V+ +
Sbjct: 173 PWEREEK-FVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAGVTQSVVDQ 231

Query: 188 VHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQIH 367
           +   W NNEL M++  LPLCRNMDRAREIVE KTGGLVVW++KD LV YRGC+Y    + 
Sbjct: 232 IRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNY---HLT 288

Query: 368 KNAGRQKSLNMAIKHLELEQSDASSQEGVDEQMGGYGIFMGGEAGQVPIDRSLYEREGDR 547
           K++           H+        S++G +E +    IF+G +A    I+ SL+ERE DR
Sbjct: 289 KSS-----------HVSTMDEKIGSKDGEEEYI-PTSIFIGDDANTPTINGSLFERETDR 336

Query: 548 LLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTDDELTYLRKFAF 727
           LL+GLGPRFVDWW  KPLPVDADLLPEVV GF  P R      R KL DDELTYLRK A+
Sbjct: 337 LLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF--HYARAKLKDDELTYLRKLAY 394

Query: 728 YLPTHFVL 751
            LPTHFVL
Sbjct: 395 ALPTHFVL 402


>ref|XP_002306656.2| hypothetical protein POPTR_0005s15420g [Populus trichocarpa]
           gi|550339039|gb|EEE93652.2| hypothetical protein
           POPTR_0005s15420g [Populus trichocarpa]
          Length = 729

 Score =  249 bits (637), Expect = 5e-64
 Identities = 136/250 (54%), Positives = 165/250 (66%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           +LPWV EER   +R  K E V + AELSLD+ELL RLRGEA KMR WVKV KAGVT++V+
Sbjct: 158 KLPWVREERVGNWRMKK-EKVVSKAELSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVV 216

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
            E+   W  +EL M++  +PLCRNM+RAR+IVE  TGGLVVW++KD  V YRGC+Y+  +
Sbjct: 217 DEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNYQWKK 274

Query: 362 IHKNAGRQKSLNMAIKHLELEQSDASSQEGVDEQMGGYGIFMGGEAGQVPIDRSLYEREG 541
               A  +++LN                                     PI+ SL+ERE 
Sbjct: 275 NFNTATIEENLNTQ-----------------------------------PINGSLFERET 299

Query: 542 DRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTDDELTYLRKF 721
           DRLL+GLGPRFVDWW  KPLPVDADLLPEVV+GF++P RL PP+ R KL DDELTYLRK 
Sbjct: 300 DRLLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKLKDDELTYLRKL 359

Query: 722 AFYLPTHFVL 751
           A  LPTHFVL
Sbjct: 360 AQSLPTHFVL 369


>ref|XP_002329296.1| predicted protein [Populus trichocarpa]
          Length = 687

 Score =  249 bits (637), Expect = 5e-64
 Identities = 136/250 (54%), Positives = 165/250 (66%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           +LPWV EER   +R  K E V + AELSLD+ELL RLRGEA KMR WVKV KAGVT++V+
Sbjct: 116 KLPWVREERVGNWRMKK-EKVVSKAELSLDKELLERLRGEAAKMRTWVKVKKAGVTQSVV 174

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
            E+   W  +EL M++  +PLCRNM+RAR+IVE  TGGLVVW++KD  V YRGC+Y+  +
Sbjct: 175 DEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYRGCNYQWKK 232

Query: 362 IHKNAGRQKSLNMAIKHLELEQSDASSQEGVDEQMGGYGIFMGGEAGQVPIDRSLYEREG 541
               A  +++LN                                     PI+ SL+ERE 
Sbjct: 233 NFNTATIEENLNTQ-----------------------------------PINGSLFERET 257

Query: 542 DRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTDDELTYLRKF 721
           DRLL+GLGPRFVDWW  KPLPVDADLLPEVV+GF++P RL PP+ R KL DDELTYLRK 
Sbjct: 258 DRLLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKLKDDELTYLRKL 317

Query: 722 AFYLPTHFVL 751
           A  LPTHFVL
Sbjct: 318 AQSLPTHFVL 327


>ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cicer arietinum]
          Length = 764

 Score =  244 bits (622), Expect = 3e-62
 Identities = 132/267 (49%), Positives = 165/267 (61%), Gaps = 17/267 (6%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           R+PW  +E+   F+  K E   +AA+L++D+ +L RLRGEA +MR WVKV K GVT+ V+
Sbjct: 151 RMPWEKDEKIGFFK-VKREKTFSAADLNVDKVVLHRLRGEAARMRKWVKVKKIGVTQDVV 209

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYE--- 352
            E+   W  NEL M++  +PLC+NM RAREIVE KTGGLV+W KKD LV YRGC+Y+   
Sbjct: 210 DEIKRSWRMNELAMVKFDIPLCQNMGRAREIVETKTGGLVIWCKKDTLVVYRGCNYQLTS 269

Query: 353 --RGQIHKNAGRQKSLNMAIKHLELEQSDASSQEGVDEQMGGYGIFMGG----------- 493
               +IH    R +  N + +  E++ +       V+       I               
Sbjct: 270 KSSPKIHTGYIRSQKTN-SYETNEVKSATKGDLSRVESTQSSSEILSSNAEHKDSLSTDN 328

Query: 494 -EAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPP 670
                 P   SLYE+E DRLL+GLGPRFVDWW  KPLPVDADLLPEVV GF+ PFRL PP
Sbjct: 329 YNMNYQPRSGSLYEKECDRLLDGLGPRFVDWWMDKPLPVDADLLPEVVPGFEPPFRLCPP 388

Query: 671 KTRPKLTDDELTYLRKFAFYLPTHFVL 751
             R KLTDDELTY RK +  LPTHFVL
Sbjct: 389 HARSKLTDDELTYFRKISHPLPTHFVL 415


>ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
          Length = 760

 Score =  241 bits (616), Expect = 1e-61
 Identities = 136/273 (49%), Positives = 169/273 (61%), Gaps = 23/273 (8%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           R+PW  ++   V RR K + V T+AEL+LDR LL RL+GEA KM  WVKVNK GVT+ V+
Sbjct: 162 RMPWEKDDDGIVLRRMKKKTV-TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVV 220

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDY---- 349
            ++  +W  NEL ML+  +PL RNMDRAREIVE KTGG+VVWSKK+ LV YRGC+Y    
Sbjct: 221 NQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNL 280

Query: 350 ---ERGQIHKN---------------AGRQKS-LNMAIKHLELEQSDASSQEGVDEQMGG 472
               + Q+H +               +G  +S LN +I   + E  +ASS          
Sbjct: 281 KHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASS---------- 330

Query: 473 YGIFMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTP 652
              F+       P+  SLYERE DRLL+ LGPRF+DWW  KPLPVDAD+LPEVV G+  P
Sbjct: 331 --FFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPP 388

Query: 653 FRLPPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
           FR  PP T+  LTD  L +LRK A  LPTHFVL
Sbjct: 389 FRRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVL 421


>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X5 [Glycine max]
          Length = 744

 Score =  241 bits (614), Expect = 2e-61
 Identities = 133/258 (51%), Positives = 167/258 (64%), Gaps = 8/258 (3%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           R+PW  +E+   F + K E   TAAEL+LD+ LL RLR EA +MR W+KV KAGVT+ V+
Sbjct: 144 RMPWEKDEKFG-FVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVV 202

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYE--- 352
            ++   W  NEL M++  +PLCRNMDRAREIVE KTGGLVV SKKD LV YRGC+++   
Sbjct: 203 DQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTT 262

Query: 353 --RGQIHKNAGRQKSLNMAIK-HLELEQSDASSQEGVDEQMGGYGIFMGG--EAGQVPID 517
                +  N      + +A K  +   +S+ SS E ++           G  +     ++
Sbjct: 263 KGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLVN 322

Query: 518 RSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTDD 697
            SLYERE +RLL+GLGPRF+DWW  KPLPVDADLLPE V GF+ PFRL PP +  KLTD 
Sbjct: 323 GSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDY 382

Query: 698 ELTYLRKFAFYLPTHFVL 751
           ELTY RK A  LPTHFVL
Sbjct: 383 ELTYFRKLAQSLPTHFVL 400


>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X2 [Glycine max]
           gi|571550194|ref|XP_006603056.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X3 [Glycine max]
           gi|571550197|ref|XP_006603057.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X4 [Glycine max]
          Length = 747

 Score =  241 bits (614), Expect = 2e-61
 Identities = 133/258 (51%), Positives = 167/258 (64%), Gaps = 8/258 (3%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           R+PW  +E+   F + K E   TAAEL+LD+ LL RLR EA +MR W+KV KAGVT+ V+
Sbjct: 144 RMPWEKDEKFG-FVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVV 202

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYE--- 352
            ++   W  NEL M++  +PLCRNMDRAREIVE KTGGLVV SKKD LV YRGC+++   
Sbjct: 203 DQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTT 262

Query: 353 --RGQIHKNAGRQKSLNMAIK-HLELEQSDASSQEGVDEQMGGYGIFMGG--EAGQVPID 517
                +  N      + +A K  +   +S+ SS E ++           G  +     ++
Sbjct: 263 KGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLVN 322

Query: 518 RSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTDD 697
            SLYERE +RLL+GLGPRF+DWW  KPLPVDADLLPE V GF+ PFRL PP +  KLTD 
Sbjct: 323 GSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDY 382

Query: 698 ELTYLRKFAFYLPTHFVL 751
           ELTY RK A  LPTHFVL
Sbjct: 383 ELTYFRKLAQSLPTHFVL 400


>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like isoform X1 [Glycine max]
          Length = 750

 Score =  241 bits (614), Expect = 2e-61
 Identities = 133/258 (51%), Positives = 167/258 (64%), Gaps = 8/258 (3%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           R+PW  +E+   F + K E   TAAEL+LD+ LL RLR EA +MR W+KV KAGVT+ V+
Sbjct: 144 RMPWEKDEKFG-FVKVKREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVV 202

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYE--- 352
            ++   W  NEL M++  +PLCRNMDRAREIVE KTGGLVV SKKD LV YRGC+++   
Sbjct: 203 DQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTT 262

Query: 353 --RGQIHKNAGRQKSLNMAIK-HLELEQSDASSQEGVDEQMGGYGIFMGG--EAGQVPID 517
                +  N      + +A K  +   +S+ SS E ++           G  +     ++
Sbjct: 263 KGSPSLRTNHYEMNRVELATKGDIFRVESNHSSSEMLNWNADHKDSISTGIQDVNCQLVN 322

Query: 518 RSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTDD 697
            SLYERE +RLL+GLGPRF+DWW  KPLPVDADLLPE V GF+ PFRL PP +  KLTD 
Sbjct: 323 GSLYERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDY 382

Query: 698 ELTYLRKFAFYLPTHFVL 751
           ELTY RK A  LPTHFVL
Sbjct: 383 ELTYFRKLAQSLPTHFVL 400


>ref|XP_006842364.1| hypothetical protein AMTR_s00079p00185530 [Amborella trichopoda]
            gi|548844430|gb|ERN04039.1| hypothetical protein
            AMTR_s00079p00185530 [Amborella trichopoda]
          Length = 886

 Score =  238 bits (607), Expect = 2e-60
 Identities = 129/251 (51%), Positives = 158/251 (62%), Gaps = 1/251 (0%)
 Frame = +2

Query: 2    RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
            +LPW   E+  VFRR K E   T AELSL + LL RLR   R +  WVKV KAGVT+ V+
Sbjct: 305  KLPWTMAEKN-VFRRVKKEKTPTKAELSLPKPLLTRLRDRGRTLTKWVKVKKAGVTQEVM 363

Query: 182  KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDYERGQ 361
             E+++VW   EL ML+  +PLCRNMDRA EIVE KTGGLVVW KK  LV YRG +Y    
Sbjct: 364  NEIYAVWKKRELAMLKFDVPLCRNMDRATEIVETKTGGLVVWRKKGTLVVYRGTNYH--- 420

Query: 362  IHKNAGRQKSLNMAIKHLEL-EQSDASSQEGVDEQMGGYGIFMGGEAGQVPIDRSLYERE 538
                    K+       LEL + +  S+  G         I+  G  G   +  +L+ERE
Sbjct: 421  -----SLSKTSETNPWSLELFDDNKISAPNGFLNFKDDTMIYQAGSDGL--MKETLFERE 473

Query: 539  GDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTPFRLPPPKTRPKLTDDELTYLRK 718
             +RLL+ LGPRF+DWW+  PLPVDADLLPEV+  F+ P RL PP  + KLTD+ELTYLRK
Sbjct: 474  ANRLLDELGPRFIDWWWSTPLPVDADLLPEVIPNFRPPLRLCPPHMQSKLTDEELTYLRK 533

Query: 719  FAFYLPTHFVL 751
            FA +LPTHF L
Sbjct: 534  FAKHLPTHFAL 544


>ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
           splicing facilitator CRS1, chloroplastic-like [Cucumis
           sativus]
          Length = 760

 Score =  238 bits (607), Expect = 2e-60
 Identities = 135/273 (49%), Positives = 168/273 (61%), Gaps = 23/273 (8%)
 Frame = +2

Query: 2   RLPWVSEERETVFRRTKTENVQTAAELSLDRELLWRLRGEARKMRNWVKVNKAGVTEAVL 181
           R+PW  ++   V RR K + V T+AEL+LDR LL RL+GEA KM  WVKVNK GVT+ V+
Sbjct: 162 RMPWEKDDDGIVLRRMKKKTV-TSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVV 220

Query: 182 KEVHSVWANNELVMLRIGLPLCRNMDRAREIVEFKTGGLVVWSKKDKLVAYRGCDY---- 349
            ++  +W  NEL ML+  +PL RNMDRAREIVE KTGG+VVWSKK+ LV YRGC+Y    
Sbjct: 221 NQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVIYRGCNYPLNL 280

Query: 350 ---ERGQIHKN---------------AGRQKS-LNMAIKHLELEQSDASSQEGVDEQMGG 472
               + Q+H +               +G  +S LN +I   + E  +ASS          
Sbjct: 281 KHSTKKQVHISPQNPVKVETDTHFSLSGHYESGLNRSINDNDGEWEEASS---------- 330

Query: 473 YGIFMGGEAGQVPIDRSLYEREGDRLLEGLGPRFVDWWYPKPLPVDADLLPEVVRGFKTP 652
              F+       P+  SLYERE DRLL+ LGPRF+DWW  KPLPVDAD+L EVV G+  P
Sbjct: 331 --FFLIRHENLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLQEVVPGYMPP 388

Query: 653 FRLPPPKTRPKLTDDELTYLRKFAFYLPTHFVL 751
           FR  PP T+  LTD  L +LRK A  LPTHFVL
Sbjct: 389 FRRCPPYTKQNLTDAGLQHLRKLAHSLPTHFVL 421