BLASTX nr result

ID: Rheum21_contig00006592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006592
         (247 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266...    74   2e-11
ref|XP_002532762.1| conserved hypothetical protein [Ricinus comm...    73   4e-11
ref|XP_006366879.1| PREDICTED: uncharacterized protein LOC102587...    72   8e-11
ref|XP_006366878.1| PREDICTED: uncharacterized protein LOC102587...    72   8e-11
ref|XP_006364813.1| PREDICTED: uncharacterized protein LOC102593...    72   1e-10
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...    71   2e-10
gb|EPS71134.1| hypothetical protein M569_03628, partial [Genlise...    70   3e-10
ref|XP_004245404.1| PREDICTED: uncharacterized protein LOC101254...    70   3e-10
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    70   3e-10
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...    69   5e-10
emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]    68   1e-09
ref|XP_006366528.1| PREDICTED: uncharacterized protein LOC102589...    67   3e-09
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]    67   3e-09
gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi...    67   3e-09
ref|XP_004241118.1| PREDICTED: uncharacterized protein LOC101264...    66   4e-09
ref|XP_004236387.1| PREDICTED: uncharacterized protein LOC101254...    66   4e-09
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]    66   4e-09
ref|XP_004244341.1| PREDICTED: uncharacterized protein LOC101263...    65   7e-09
ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267...    65   7e-09
gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]              65   7e-09

>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
           lycopersicum]
          Length = 1537

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/80 (45%), Positives = 47/80 (58%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV   FDG+ Y +W   +  AL  K K+GF+DGSC+KP      L +W R D MV  WI 
Sbjct: 78  LVPVQFDGTGYRSWRRGVMRALSVKNKLGFIDGSCEKPNNNPSQLRQWQRCDDMVTSWIL 137

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS++  IS    YVT++ EL
Sbjct: 138 NSLIKEISDSVEYVTNSAEL 157


>ref|XP_002532762.1| conserved hypothetical protein [Ricinus communis]
           gi|223527491|gb|EEF29619.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 32/80 (40%), Positives = 52/80 (65%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           L+STL + ++Y+ WS ++KLALGAK K+G+++G   KP    +    W + D +V  WI 
Sbjct: 44  LISTLMNENNYIPWSRSVKLALGAKDKLGYINGEIAKPASTAKKYKMWKKTDCLVAAWIL 103

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           +S++   + GFIY +S K+L
Sbjct: 104 SSILKEHAEGFIYCSSTKDL 123


>ref|XP_006366879.1| PREDICTED: uncharacterized protein LOC102587048 isoform X2 [Solanum
           tuberosum]
          Length = 384

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/80 (42%), Positives = 47/80 (58%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV+T+FDG  +  W  A+ +AL AK K+GF+DGSCK P      L  W R + MV  W+ 
Sbjct: 39  LVNTIFDGHGFAGWKRALLIALSAKNKLGFIDGSCKSPAAGSINLRLWNRYNDMVTSWLL 98

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+   +Y  SA+ L
Sbjct: 99  NSLSKEIAASVLYSQSAESL 118


>ref|XP_006366878.1| PREDICTED: uncharacterized protein LOC102587048 isoform X1 [Solanum
           tuberosum]
          Length = 435

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/80 (42%), Positives = 47/80 (58%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV+T+FDG  +  W  A+ +AL AK K+GF+DGSCK P      L  W R + MV  W+ 
Sbjct: 39  LVNTIFDGHGFAGWKRALLIALSAKNKLGFIDGSCKSPAAGSINLRLWNRYNDMVTSWLL 98

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+   +Y  SA+ L
Sbjct: 99  NSLSKEIAASVLYSQSAESL 118


>ref|XP_006364813.1| PREDICTED: uncharacterized protein LOC102593226 [Solanum tuberosum]
          Length = 384

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV+T+FDG  +  W  A+ +AL AK K+GF+DGSCK P      L  W R + MV  W+ 
Sbjct: 39  LVNTVFDGHGFAGWKRALLIALSAKNKLGFIDGSCKSPATGSSNLRLWNRCNDMVTSWLL 98

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+    +   +Y  SA+ L
Sbjct: 99  NSLSKETAASVLYSKSAESL 118


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
          Length = 1131

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/81 (40%), Positives = 49/81 (60%)
 Frame = -3

Query: 245 QLVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWI 66
           QL+S   DGS+Y +W+ AMK+AL AK KIGFVDG+  +P+        W R + MV+ W+
Sbjct: 26  QLISLKLDGSNYDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPTFRLWSRCNSMVKSWL 85

Query: 65  TNSMVTGISRGFIYVTSAKEL 3
            NS+   I R  + +  A ++
Sbjct: 86  LNSVSPQIYRSILRLNDAADI 106


>gb|EPS71134.1| hypothetical protein M569_03628, partial [Genlisea aurea]
          Length = 217

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/80 (40%), Positives = 46/80 (57%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LVS L    +Y  W   ++LALGAK K+G +DG   KPE      ++W+R DYM+  W+ 
Sbjct: 23  LVSELLTTRNYFTWRRGVRLALGAKNKLGMIDGDLPKPEQNHPTFSQWVRTDYMIISWLL 82

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   +  GF    S++EL
Sbjct: 83  NSISKDLVGGFSGCNSSREL 102


>ref|XP_004245404.1| PREDICTED: uncharacterized protein LOC101254718 [Solanum
           lycopersicum]
          Length = 508

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 34/80 (42%), Positives = 45/80 (56%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV T FDG+ Y +W   +  AL  K K+GF+DGSC KP      L +W R D MV  WI 
Sbjct: 3   LVPTQFDGTGYRSWRRGVMRALPMKNKLGFIDGSCVKPAANSNQLHQWQRCDDMVTSWIL 62

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   ++    YV+ + EL
Sbjct: 63  NSLTKEVADSVEYVSDSVEL 82


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           L++T FDGS Y NW   + ++L AK K+GF+ G+ KKP+ E     +W R   MV  W+ 
Sbjct: 49  LINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKKPDKEDLLFEQWRRCSDMVLAWLL 108

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+   +Y  +A+EL
Sbjct: 109 NSLSKEIAESVLYSQTAQEL 128


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           +VS   DG++Y  WS AMK+AL AK KI F+DGSC +PE     L  W R + MV+ WI 
Sbjct: 66  IVSVQLDGANYNQWSSAMKIALDAKNKIAFIDGSCPRPEEGNHLLRIWSRCNSMVKSWIL 125

Query: 62  NSM 54
           NS+
Sbjct: 126 NSV 128


>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/80 (41%), Positives = 47/80 (58%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LVS + +G +Y  WS AM+++L AK KIGFV GS K P    ++   W R + MV  W+ 
Sbjct: 33  LVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLL 92

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+   IY  +A E+
Sbjct: 93  NSIHPDIASSVIYAETASEI 112


>ref|XP_006366528.1| PREDICTED: uncharacterized protein LOC102589874 [Solanum tuberosum]
          Length = 400

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = -3

Query: 242 LVSTLFDG-SDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWI 66
           LVS    G  +Y+ WS++MK+AL AK KIGF+DG C+K + +G+    W R +  V  WI
Sbjct: 43  LVSQQLTGIENYIGWSNSMKVALLAKNKIGFIDGKCRKVDYKGDLEHEWERCNAFVLSWI 102

Query: 65  TNSMVTGISRGFIYVTSA 12
           TNS+   ++ G ++ ++A
Sbjct: 103 TNSVSKELANGLMFSSNA 120


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/80 (40%), Positives = 46/80 (57%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LVS + +G +Y  WS AM+++L AK KIGFV GS K P    ++   W R + MV  W+ 
Sbjct: 30  LVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDDSFPSWQRCNDMVISWLL 89

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+   IY  +  E+
Sbjct: 90  NSIHPDIASSVIYAETTSEI 109


>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
           gi|17065314|gb|AAL32811.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
           gi|21387147|gb|AAM47977.1| putative retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 411

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/80 (40%), Positives = 48/80 (60%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           +V+ + DGS+Y +WS AM+++L AK K+GFVDGS  +P V+      W R + MV+ WI 
Sbjct: 79  IVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFRIWSRCNSMVKSWIL 138

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           N +   I    +Y   A E+
Sbjct: 139 NVVNKEIYDSILYYEDAVEM 158


>ref|XP_004241118.1| PREDICTED: uncharacterized protein LOC101264015 [Solanum
           lycopersicum]
          Length = 693

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/80 (37%), Positives = 46/80 (57%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV+++FDG  Y  W  A+ +AL AK K+ F+DGS  +P V       W R + MV  W+ 
Sbjct: 47  LVNSIFDGKSYGGWRRAVFIALSAKNKLSFIDGSLSEPAVSSPTYKAWNRCNDMVISWLL 106

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+   +Y  +AK++
Sbjct: 107 NSLSKDIAESVLYSKTAKDI 126


>ref|XP_004236387.1| PREDICTED: uncharacterized protein LOC101254987 [Solanum
           lycopersicum]
          Length = 620

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 30/80 (37%), Positives = 46/80 (57%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV+++FDG  Y  W  A+ +AL AK K+ F+DGS  +P V       W R + MV  W+ 
Sbjct: 47  LVNSIFDGKSYGGWRRAVFIALSAKNKLSFIDGSLSEPAVSSPTYKAWNRCNDMVISWLL 106

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+   +Y  +AK++
Sbjct: 107 NSLSKDIAESVLYSKTAKDI 126


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKP--EVEGEALARWIRADYMVRCW 69
           L+S   +G +Y  W  AM LAL +K K+GFV+GS K P  E++ E  A W R + MV  W
Sbjct: 31  LISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKAPSEEIDPEGYATWSRCNDMVHSW 90

Query: 68  ITNSMVTGISRGFIYVTSAKEL 3
           I N++   I+   IY ++A E+
Sbjct: 91  IVNTLNPEIANSVIYYSTAHEV 112


>ref|XP_004244341.1| PREDICTED: uncharacterized protein LOC101263436 [Solanum
           lycopersicum]
          Length = 387

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/80 (41%), Positives = 42/80 (52%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LVS LFDG  Y +W   +  +L  K K+GF++G C+KP         W R D MV  WI 
Sbjct: 35  LVSNLFDGVGYRSWRRGVLRSLSVKNKLGFINGECEKPASSSPNFRLWERCDNMVTSWIL 94

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+    YV  A EL
Sbjct: 95  NSLGKEIADSVEYVNDAAEL 114


>ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267997 [Solanum
           lycopersicum]
          Length = 811

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/80 (41%), Positives = 43/80 (53%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           LV T FDG  Y +W   +  AL  K K GF+DG+C KP        +W R D MV  WI 
Sbjct: 31  LVPTQFDGVGYRSWRRGILRALSVKNKTGFIDGNCAKPAENSPQARQWQRCDDMVTSWIL 90

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           NS+   I+    YV+++ EL
Sbjct: 91  NSLTKEIADSVEYVSNSCEL 110


>gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
          Length = 1309

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 31/80 (38%), Positives = 46/80 (57%)
 Frame = -3

Query: 242 LVSTLFDGSDYVNWSHAMKLALGAKFKIGFVDGSCKKPEVEGEALARWIRADYMVRCWIT 63
           +VS + DG+ Y NWS AM+++L AK K+ FVDGS  +P+V       W R + MV+ W+ 
Sbjct: 80  IVSHVLDGTSYNNWSIAMRMSLDAKNKLSFVDGSLPRPDVSDRMFRIWSRCNSMVKTWLL 139

Query: 62  NSMVTGISRGFIYVTSAKEL 3
           N +   I    +Y   A E+
Sbjct: 140 NVVSKEIYDSILYYEDAVEM 159


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