BLASTX nr result
ID: Rheum21_contig00006567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00006567
(833 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus... 168 2e-39
gb|EXC08476.1| hypothetical protein L484_009619 [Morus notabilis] 166 7e-39
ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|5... 164 4e-38
ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro... 160 5e-37
ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloro... 157 4e-36
gb|EOY13088.1| 30S ribosomal protein S20 isoform 1 [Theobroma ca... 156 7e-36
ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloro... 153 6e-35
ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citr... 152 2e-34
ref|XP_004291502.1| PREDICTED: 30S ribosomal protein S20, chloro... 149 9e-34
ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloro... 147 5e-33
ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycin... 143 7e-32
gb|ESW05227.1| hypothetical protein PHAVU_011G162800g [Phaseolus... 142 1e-31
gb|EOY13090.1| 30S ribosomal protein S20 isoform 3 [Theobroma ca... 142 1e-31
gb|EMJ13317.1| hypothetical protein PRUPE_ppa012008mg [Prunus pe... 140 4e-31
ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycin... 140 6e-31
ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatu... 140 7e-31
ref|XP_004510023.1| PREDICTED: 30S ribosomal protein S20, chloro... 139 1e-30
gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693... 139 1e-30
ref|XP_004510022.1| PREDICTED: 30S ribosomal protein S20, chloro... 138 2e-30
ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana... 132 2e-28
>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
putative [Ricinus communis]
Length = 185
Score = 168 bits (425), Expect = 2e-39
Identities = 87/145 (60%), Positives = 102/145 (70%)
Frame = -3
Query: 645 SPSFSGTLSLDGFSQGCLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKA 466
S SFS +S D F++GCLSM +R +G IVCEAAP+ +ADS +KA
Sbjct: 37 SLSFSSAISHDVFNKGCLSMSIVKRPIGHSIVCEAAPKKRADSAAKRARQAEKRRIYHKA 96
Query: 465 RKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGAR 286
KSEVRTRM+ +AQ+EE++PIEKLIAEAYS IDKAVK GTLHRNTGAR
Sbjct: 97 HKSEVRTRMKKVLEALDDLRKKSDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGAR 156
Query: 285 RKSRLARRKQAVEIHHGWYAPAPAD 211
RKSRLARRK+AVEIHHGWY PAPA+
Sbjct: 157 RKSRLARRKKAVEIHHGWYTPAPAE 181
>gb|EXC08476.1| hypothetical protein L484_009619 [Morus notabilis]
Length = 180
Score = 166 bits (421), Expect = 7e-39
Identities = 96/177 (54%), Positives = 113/177 (63%), Gaps = 3/177 (1%)
Frame = -3
Query: 726 SASC-ALPAKFKXXXXXXXXXXXXXXSTSPSFSGTLSLDGFSQGCLSMRTPRRQLGQ--L 556
S+SC ALP+K + +S SFS TLS D FS+GCLSM +R + +
Sbjct: 9 SSSCLALPSKLRSLSISGSSHS-----SSLSFSATLSHDFFSKGCLSMNAVQRTMRRSAA 63
Query: 555 IVCEAAPQNKADSXXXXXXXXXXXXXRNKARKSEVRTRMRXXXXXXXXXXXXXEAQSEEI 376
+VCEAAP KADS NKARKSEV+TRM+ +AQ+EE+
Sbjct: 64 VVCEAAPTKKADSAAKRARQAEKRRIYNKARKSEVKTRMKKVLEALDTLKKKQDAQAEEV 123
Query: 375 IPIEKLIAEAYSAIDKAVKTGTLHRNTGARRKSRLARRKQAVEIHHGWYAPAPADLA 205
+P+EKLIAEAYS IDKAVK GTLHRNTGARRKSRLARRK+AVEIHHGWY P PA A
Sbjct: 124 LPVEKLIAEAYSIIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPTPAATA 180
>ref|XP_002329074.1| predicted protein [Populus trichocarpa]
gi|566153920|ref|XP_006370215.1| chloroplast 30S
ribosomal protein S20 [Populus trichocarpa]
gi|550349394|gb|ERP66784.1| chloroplast 30S ribosomal
protein S20 [Populus trichocarpa]
Length = 182
Score = 164 bits (415), Expect = 4e-38
Identities = 88/146 (60%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
Frame = -3
Query: 648 TSPSFSGTLSLDGFSQGCLSMRTPRRQLGQL-IVCEAAPQNKADSXXXXXXXXXXXXXRN 472
+S SFS +LS F++GCLSMRT +R + IVCE+ P+ KADS N
Sbjct: 32 SSLSFSSSLSHSIFNKGCLSMRTTQRSIHNFSIVCESTPKKKADSAEKRTRQAEKRRVYN 91
Query: 471 KARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTG 292
KARKSEV+TRM+ EAQ EE++PIEKLIAEAYS IDKA+K GTLHRNTG
Sbjct: 92 KARKSEVKTRMKKVLEALDDLKKKPEAQFEEVLPIEKLIAEAYSVIDKAIKVGTLHRNTG 151
Query: 291 ARRKSRLARRKQAVEIHHGWYAPAPA 214
ARRKSRLARRK+AVEIHHGWY+PAPA
Sbjct: 152 ARRKSRLARRKKAVEIHHGWYSPAPA 177
>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
product [Vitis vinifera]
Length = 183
Score = 160 bits (405), Expect = 5e-37
Identities = 92/173 (53%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Frame = -3
Query: 732 GFSASCALPAKFKXXXXXXXXXXXXXXS-TSPSFSGTLSLDGFSQGCLSMRTPRRQLGQL 556
G + ALP+KF+ TS FS LS FS+G LS+ T R
Sbjct: 7 GVAHCLALPSKFRILSLNASSSSSCSVPFTSLGFSSNLSQTVFSKGRLSISTIRGPTHHS 66
Query: 555 IVCEAAPQNKADSXXXXXXXXXXXXXRNKARKSEVRTRMRXXXXXXXXXXXXXEAQSEEI 376
IVC+AAP KADS NKARKSE+RTRM+ +AQ+EE+
Sbjct: 67 IVCDAAPMRKADSAAKRVRQAEKRRIYNKARKSEIRTRMKKVLEELDGLKKKPDAQAEEV 126
Query: 375 IPIEKLIAEAYSAIDKAVKTGTLHRNTGARRKSRLARRKQAVEIHHGWYAPAP 217
+PIEKLIAEAYS IDKAVK GTLHRNTGARRKSRLARRK+AVEIHHGWY PAP
Sbjct: 127 LPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPAP 179
>ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Cucumis
sativus] gi|449507080|ref|XP_004162928.1| PREDICTED: 30S
ribosomal protein S20, chloroplastic-like [Cucumis
sativus]
Length = 184
Score = 157 bits (397), Expect = 4e-36
Identities = 83/141 (58%), Positives = 94/141 (66%)
Frame = -3
Query: 645 SPSFSGTLSLDGFSQGCLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKA 466
S SFS +SL FS GCLSMR R +VCEAAP++K DS NKA
Sbjct: 38 SLSFSSNISLSAFSNGCLSMRKTERLHRYSVVCEAAPKSKVDSAAKRARQAEKRRIYNKA 97
Query: 465 RKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGAR 286
RKSE++TRM+ EAQSEE++PIE LIAEAYS IDKAV+ GTLHRNT AR
Sbjct: 98 RKSEIKTRMKKVLEALDGLKKKAEAQSEEVLPIETLIAEAYSVIDKAVRAGTLHRNTAAR 157
Query: 285 RKSRLARRKQAVEIHHGWYAP 223
RKSRLARRK+AVEIHHGWY P
Sbjct: 158 RKSRLARRKKAVEIHHGWYTP 178
>gb|EOY13088.1| 30S ribosomal protein S20 isoform 1 [Theobroma cacao]
Length = 193
Score = 156 bits (395), Expect = 7e-36
Identities = 86/143 (60%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = -3
Query: 639 SFSGTLSLDGFSQGCLSMRT-PRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKAR 463
SFS +LS + FS+G LS+ T + + + +VCEAAP+ KADS NKAR
Sbjct: 47 SFSNSLSHNFFSKGSLSISTMTQNPIRRTVVCEAAPKKKADSAAKRARQAEKRRIYNKAR 106
Query: 462 KSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGARR 283
KSEVRTRM+ +AQ+EEI IEKLIAEAYS IDKAVK GTLHRNTGARR
Sbjct: 107 KSEVRTRMKKVLEALDVLRKKPDAQAEEIFSIEKLIAEAYSVIDKAVKVGTLHRNTGARR 166
Query: 282 KSRLARRKQAVEIHHGWYAPAPA 214
KSRLARRK+AVEIHHGWY PAPA
Sbjct: 167 KSRLARRKKAVEIHHGWYTPAPA 189
>ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
lycopersicum]
Length = 184
Score = 153 bits (387), Expect = 6e-35
Identities = 82/144 (56%), Positives = 98/144 (68%)
Frame = -3
Query: 645 SPSFSGTLSLDGFSQGCLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKA 466
S SFS SL+ FS+G +S+ + + IVCEAAP KADS +KA
Sbjct: 32 SLSFSANTSLNLFSKGTVSVNPVQMPFRRSIVCEAAPTKKADSAAKRARQAEKRRIYHKA 91
Query: 465 RKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGAR 286
+KSEVRTR++ +A+SEE++ +EKLIAEAYSAIDKAVK GTLHRNTGAR
Sbjct: 92 KKSEVRTRIKTVLEALETLRKKTDAESEEVVSVEKLIAEAYSAIDKAVKVGTLHRNTGAR 151
Query: 285 RKSRLARRKQAVEIHHGWYAPAPA 214
RKSRLARRK+AVEIHHGWY PAPA
Sbjct: 152 RKSRLARRKKAVEIHHGWYVPAPA 175
>ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citrus clementina]
gi|568820617|ref|XP_006464806.1| PREDICTED: 30S
ribosomal protein S20, chloroplastic-like [Citrus
sinensis] gi|557555006|gb|ESR65020.1| hypothetical
protein CICLE_v10009636mg [Citrus clementina]
Length = 185
Score = 152 bits (383), Expect = 2e-34
Identities = 87/175 (49%), Positives = 107/175 (61%), Gaps = 3/175 (1%)
Frame = -3
Query: 726 SASC-ALPAKFKXXXXXXXXXXXXXXSTSPS--FSGTLSLDGFSQGCLSMRTPRRQLGQL 556
S+SC + +KFK +T S FS LS + FS G L+M +R +
Sbjct: 8 SSSCLTIQSKFKTLSLNNNSSSHSSFATFKSLCFSNKLSHNVFSTGSLTMSPIQRPMRHS 67
Query: 555 IVCEAAPQNKADSXXXXXXXXXXXXXRNKARKSEVRTRMRXXXXXXXXXXXXXEAQSEEI 376
+VC+AA + KADS NK+RKSEV+TRM+ +AQ EE+
Sbjct: 68 VVCKAATKKKADSAAKRARQAEKRRIYNKSRKSEVKTRMKKVLEALDGLRKKPDAQPEEV 127
Query: 375 IPIEKLIAEAYSAIDKAVKTGTLHRNTGARRKSRLARRKQAVEIHHGWYAPAPAD 211
+P+EKLIAEAYS IDKAVK GTLHRNTGARRKSRLARRK+AVEIHHGWY P PA+
Sbjct: 128 LPVEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPTPAE 182
>ref|XP_004291502.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 186
Score = 149 bits (377), Expect = 9e-34
Identities = 87/182 (47%), Positives = 110/182 (60%), Gaps = 3/182 (1%)
Frame = -3
Query: 744 SAFHGFSASC-ALPAKFKXXXXXXXXXXXXXXSTSPS--FSGTLSLDGFSQGCLSMRTPR 574
+A H S+SC ALP+KF + PS FS LS D FS+G L++ +
Sbjct: 3 AALHCLSSSCLALPSKFGNLSLNGPSTSSASSTHFPSLSFSANLSHDFFSKGFLNLGPVQ 62
Query: 573 RQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKARKSEVRTRMRXXXXXXXXXXXXXE 394
R + + +VCEAAP K DS NK+RKSE++TRM+ +
Sbjct: 63 RSVRRSVVCEAAPTKKPDSAEKRARQAEKRRIYNKSRKSEIKTRMKKVLEALDVLKKKPD 122
Query: 393 AQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGARRKSRLARRKQAVEIHHGWYAPAPA 214
AQ+EE++ IEKLI EAYS IDKAVK GTLHRNTGARRKSRLARRK+AVEI GWY PA +
Sbjct: 123 AQAEEVLSIEKLIGEAYSIIDKAVKVGTLHRNTGARRKSRLARRKKAVEIQKGWYTPADS 182
Query: 213 DL 208
++
Sbjct: 183 EV 184
>ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
tuberosum]
Length = 184
Score = 147 bits (371), Expect = 5e-33
Identities = 79/144 (54%), Positives = 95/144 (65%)
Frame = -3
Query: 645 SPSFSGTLSLDGFSQGCLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKA 466
S SF SL+ FS+G +S+ + + IVCEAAP KADS +KA
Sbjct: 32 SLSFCANTSLNLFSKGTVSLNPVQMPFRRSIVCEAAPTKKADSAAKRARQAEKRRIYHKA 91
Query: 465 RKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGAR 286
+KSEVRTR++ +A+SEE++ +EKLIAEAYSAIDKAVK GTLHRNTGAR
Sbjct: 92 KKSEVRTRIKTVLEALETLRKKTDAESEEVVSVEKLIAEAYSAIDKAVKVGTLHRNTGAR 151
Query: 285 RKSRLARRKQAVEIHHGWYAPAPA 214
RKSRLARRK+AVEIHHGWY P A
Sbjct: 152 RKSRLARRKKAVEIHHGWYVPVAA 175
>ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycine max]
gi|255625577|gb|ACU13133.1| unknown [Glycine max]
Length = 180
Score = 143 bits (361), Expect = 7e-32
Identities = 81/144 (56%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Frame = -3
Query: 645 SPSFSGTLSLDGFSQG-CLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNK 469
S SFS LS FS+G LS+ T R+ +VCEAAP+ K DS NK
Sbjct: 35 SLSFSRNLSRPFFSKGNSLSLSTVLRRAS--VVCEAAPKKKVDSAVKRARQAEKHRVYNK 92
Query: 468 ARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGA 289
ARKSE++TR + +AQ+EEI+PIEKLI EAYS IDKAV+ GTLHRNTGA
Sbjct: 93 ARKSEIKTRTKKVLEALEVLKKKSDAQAEEILPIEKLIGEAYSIIDKAVRVGTLHRNTGA 152
Query: 288 RRKSRLARRKQAVEIHHGWYAPAP 217
RKSRLARRK+AVEIHHGWY PAP
Sbjct: 153 NRKSRLARRKKAVEIHHGWYTPAP 176
>gb|ESW05227.1| hypothetical protein PHAVU_011G162800g [Phaseolus vulgaris]
Length = 178
Score = 142 bits (359), Expect = 1e-31
Identities = 80/149 (53%), Positives = 96/149 (64%), Gaps = 1/149 (0%)
Frame = -3
Query: 648 TSPSFSGTLSLDGFSQG-CLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRN 472
TS SFS +LS SQG CL + T +R+ +VCEAAP+ K DS N
Sbjct: 32 TSLSFSKSLSHPLLSQGNCLPLSTVQRRAS--VVCEAAPKKKVDSAVKRTRQAEDRRIYN 89
Query: 471 KARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTG 292
KARKSE++TR + +A SEEI+PIEKLI EAYS IDKAV++GTLHRNT
Sbjct: 90 KARKSEIKTRTKKVLEALEVLKKKQDAASEEILPIEKLIGEAYSTIDKAVRSGTLHRNTA 149
Query: 291 ARRKSRLARRKQAVEIHHGWYAPAPADLA 205
A RK+RLARRK+AVEIHHGWY P P +A
Sbjct: 150 ANRKARLARRKKAVEIHHGWYTPVPEAVA 178
>gb|EOY13090.1| 30S ribosomal protein S20 isoform 3 [Theobroma cacao]
Length = 186
Score = 142 bits (359), Expect = 1e-31
Identities = 82/143 (57%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
Frame = -3
Query: 639 SFSGTLSLDGFSQGCLSMRT-PRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKAR 463
SFS +LS + FS+G LS+ T + + + +VCEAAP+ KADS NKAR
Sbjct: 47 SFSNSLSHNFFSKGSLSISTMTQNPIRRTVVCEAAPKKKADSAAKRARQAEKRRIYNKAR 106
Query: 462 KSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGARR 283
KSEV + +AQ+EEI IEKLIAEAYS IDKAVK GTLHRNTGARR
Sbjct: 107 KSEVLEAL-------DVLRKKPDAQAEEIFSIEKLIAEAYSVIDKAVKVGTLHRNTGARR 159
Query: 282 KSRLARRKQAVEIHHGWYAPAPA 214
KSRLARRK+AVEIHHGWY PAPA
Sbjct: 160 KSRLARRKKAVEIHHGWYTPAPA 182
>gb|EMJ13317.1| hypothetical protein PRUPE_ppa012008mg [Prunus persica]
Length = 187
Score = 140 bits (354), Expect = 4e-31
Identities = 83/181 (45%), Positives = 102/181 (56%), Gaps = 5/181 (2%)
Frame = -3
Query: 744 SAFHGFSASCALPAKFKXXXXXXXXXXXXXXSTSP-----SFSGTLSLDGFSQGCLSMRT 580
+A H S+ ALP+K STS SFS +LS + FS+G S+
Sbjct: 3 AAVHCLSSCLALPSKLSNLSLNGPSTSSATHSTSTHFTSLSFSASLSHNFFSKGYFSLSP 62
Query: 579 PRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNKARKSEVRTRMRXXXXXXXXXXXX 400
+R + +VCE A K DS +K+RKSE++TRM+
Sbjct: 63 VQRPTRRSVVCEVATTKKPDSAEKRARQAEKRRIYHKSRKSEIKTRMKKVLEALDVLRKK 122
Query: 399 XEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGARRKSRLARRKQAVEIHHGWYAPA 220
+A EE++ IEKLI EAYS IDKAVK GTLHRNTGARRKSRLARRK+AVEIHHGWY P
Sbjct: 123 PDATPEEVLSIEKLIGEAYSIIDKAVKVGTLHRNTGARRKSRLARRKKAVEIHHGWYTPN 182
Query: 219 P 217
P
Sbjct: 183 P 183
>ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycine max]
gi|255640470|gb|ACU20521.1| unknown [Glycine max]
Length = 164
Score = 140 bits (353), Expect = 6e-31
Identities = 81/144 (56%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Frame = -3
Query: 645 SPSFSGTLSLDGFSQG-CLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNK 469
S SFS LS FSQG CLS+ T +R+ +VCEAAP+ K DS NK
Sbjct: 20 SLSFSRNLSHPLFSQGNCLSLSTAQRRAS--VVCEAAPK-KVDSAVKRARQAEKRRVYNK 76
Query: 468 ARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGA 289
ARKSE++TR + +AQ+EEI+ IEKLI EAYS IDKAV+ GTLHRNTGA
Sbjct: 77 ARKSEIKTRTKKVLEALEVLKKKQDAQAEEILSIEKLIGEAYSIIDKAVRVGTLHRNTGA 136
Query: 288 RRKSRLARRKQAVEIHHGWYAPAP 217
RKSRLARRK+AVEIHHGWY P P
Sbjct: 137 NRKSRLARRKKAVEIHHGWYTPTP 160
>ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatula]
gi|355522576|gb|AET03030.1| 30S ribosomal protein S20
[Medicago truncatula]
Length = 173
Score = 140 bits (352), Expect = 7e-31
Identities = 82/151 (54%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
Frame = -3
Query: 648 TSPSFSGTLSLDG-------FSQGCLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXX 490
TS S SG+LS SQG S+ T +R+ G ++VCEAAP+ K DS
Sbjct: 21 TSSSNSGSLSFSRNISQSRVLSQGTFSLNTVQRR-GVVVVCEAAPK-KVDSAIKKALQAE 78
Query: 489 XXXXRNKARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGT 310
NKARKSE+RTR + +AQ+EEI IEK+I EAYS IDKAVK GT
Sbjct: 79 RRRVYNKARKSEIRTRTKKVLEALELLKKKSDAQAEEITSIEKMIGEAYSIIDKAVKVGT 138
Query: 309 LHRNTGARRKSRLARRKQAVEIHHGWYAPAP 217
LHRNTGA RKSRLARRK+AVEIHHGWYAP P
Sbjct: 139 LHRNTGANRKSRLARRKKAVEIHHGWYAPVP 169
>ref|XP_004510023.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like isoform X2
[Cicer arietinum]
Length = 172
Score = 139 bits (350), Expect = 1e-30
Identities = 81/142 (57%), Positives = 92/142 (64%)
Frame = -3
Query: 648 TSPSFSGTLSLDGFSQGCLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNK 469
TS SFS +S SQG LS+ R Q ++VCEAAP+ K DS NK
Sbjct: 28 TSLSFSRNISHTVLSQGSLSLS--RVQKRGVVVCEAAPK-KVDSAIKRARQAEKRRVYNK 84
Query: 468 ARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGA 289
ARKSE+RTR + +AQSEEI+ IEK+I EAYS IDKAVK GTLHRNTGA
Sbjct: 85 ARKSEIRTRTKKVLDALELLRKKPDAQSEEIVSIEKMIGEAYSIIDKAVKVGTLHRNTGA 144
Query: 288 RRKSRLARRKQAVEIHHGWYAP 223
RKSRLARRK+AVEIHHGWYAP
Sbjct: 145 NRKSRLARRKKAVEIHHGWYAP 166
>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
[Lotus japonicus]
Length = 177
Score = 139 bits (350), Expect = 1e-30
Identities = 80/171 (46%), Positives = 98/171 (57%), Gaps = 3/171 (1%)
Frame = -3
Query: 726 SASCA---LPAKFKXXXXXXXXXXXXXXSTSPSFSGTLSLDGFSQGCLSMRTPRRQLGQL 556
+ SC+ LP+KF+ S S SF +S FSQG LS+ +R+ L
Sbjct: 3 AVSCSWLTLPSKFRDLSPASSSSSSISNSASLSFCRNISHTVFSQGSLSLSPVQRRT--L 60
Query: 555 IVCEAAPQNKADSXXXXXXXXXXXXXRNKARKSEVRTRMRXXXXXXXXXXXXXEAQSEEI 376
+VCE + K DS NKARKSE++TRM+ +AQ EEI
Sbjct: 61 VVCEVVTKKKVDSAIKRARQAEKRRIYNKARKSEIKTRMKKVLEALESLKKKSDAQPEEI 120
Query: 375 IPIEKLIAEAYSAIDKAVKTGTLHRNTGARRKSRLARRKQAVEIHHGWYAP 223
+PIEKLI EAYS IDKA++ GTLHRNTG RKSRLARRK+ VEIHHGWY P
Sbjct: 121 LPIEKLIGEAYSVIDKAIRVGTLHRNTGGHRKSRLARRKKVVEIHHGWYTP 171
>ref|XP_004510022.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like isoform X1
[Cicer arietinum]
Length = 172
Score = 138 bits (348), Expect = 2e-30
Identities = 81/142 (57%), Positives = 92/142 (64%)
Frame = -3
Query: 648 TSPSFSGTLSLDGFSQGCLSMRTPRRQLGQLIVCEAAPQNKADSXXXXXXXXXXXXXRNK 469
TS SFS +S SQG LS+ R Q ++VCEAAP+ K DS NK
Sbjct: 28 TSLSFSRNISHTVLSQGRLSLS--RVQKRGVVVCEAAPK-KVDSAIKRARQAEKRRVYNK 84
Query: 468 ARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNTGA 289
ARKSE+RTR + +AQSEEI+ IEK+I EAYS IDKAVK GTLHRNTGA
Sbjct: 85 ARKSEIRTRTKKVLDALELLRKKPDAQSEEIVSIEKMIGEAYSIIDKAVKVGTLHRNTGA 144
Query: 288 RRKSRLARRKQAVEIHHGWYAP 223
RKSRLARRK+AVEIHHGWYAP
Sbjct: 145 NRKSRLARRKKAVEIHHGWYAP 166
>ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana]
gi|75308015|sp|Q9ASV6.1|RR20_ARATH RecName: Full=30S
ribosomal protein S20, chloroplastic; Flags: Precursor
gi|188036221|pdb|3BBN|T Chain T, Homology Model For The
Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome.
gi|13605653|gb|AAK32820.1|AF361807_1 AT3g15190/F4B12_10
[Arabidopsis thaliana]
gi|13899121|gb|AAK48982.1|AF370555_1 Unknown protein
[Arabidopsis thaliana] gi|15777889|gb|AAL05905.1|
AT3g15190/F4B12_10 [Arabidopsis thaliana]
gi|18377542|gb|AAL66937.1| unknown protein [Arabidopsis
thaliana] gi|21592469|gb|AAM64420.1| 30S ribosomal
protein S20 [Arabidopsis thaliana]
gi|332642109|gb|AEE75630.1| 30S ribosomal protein S20
[Arabidopsis thaliana]
Length = 202
Score = 132 bits (332), Expect = 2e-28
Identities = 80/150 (53%), Positives = 95/150 (63%), Gaps = 2/150 (1%)
Frame = -3
Query: 648 TSPSFSGTLS-LDGFSQGCLSMRTPRRQLGQLIVCEAA-PQNKADSXXXXXXXXXXXXXR 475
+S SFS ++S FS G L ++ P RQL IVCEAA P KADS
Sbjct: 47 SSLSFSQSVSQCVAFSTGNLWVQKPMRQL---IVCEAAAPTKKADSAAKRARQAEKRRVY 103
Query: 474 NKARKSEVRTRMRXXXXXXXXXXXXXEAQSEEIIPIEKLIAEAYSAIDKAVKTGTLHRNT 295
NK++KSE RTRM+ +AQ++EI+ +EKLI EAYSAIDKAVK LH+NT
Sbjct: 104 NKSKKSEARTRMKKVLEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKALHKNT 163
Query: 294 GARRKSRLARRKQAVEIHHGWYAPAPADLA 205
GARRKSRLARRK+AVEIHHGWY P A A
Sbjct: 164 GARRKSRLARRKKAVEIHHGWYVPDAAAAA 193