BLASTX nr result

ID: Rheum21_contig00006474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006474
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005163258.1| PREDICTED: histone H3-like centromeric prote...    60   2e-07
ref|XP_003927455.1| PREDICTED: uncharacterized protein LOC101028...    57   3e-06
ref|XP_005640222.1| PREDICTED: uncharacterized protein LOC100856...    55   1e-05

>ref|XP_005163258.1| PREDICTED: histone H3-like centromeric protein CSE4-like [Danio
           rerio]
          Length = 283

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -3

Query: 312 AIHAKRVTIMPKDIQLARRIRGERA*ALFCCLVADGLA 199
           AIHAKRVTIMPKDIQLARRIRGERA   FCC + + +A
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGERASTRFCCNILEKMA 149


>ref|XP_003927455.1| PREDICTED: uncharacterized protein LOC101028819 [Saimiri
           boliviensis boliviensis]
          Length = 422

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/51 (62%), Positives = 35/51 (68%), Gaps = 7/51 (13%)
 Frame = -3

Query: 312 AIHAKRVTIMPKDIQLARRIRGERA*ALFCCL-------VADGLAVIRFRV 181
           AIHAKRVTIMPKDIQLARRIRGERA  +  CL       + DGL  +  RV
Sbjct: 112 AIHAKRVTIMPKDIQLARRIRGERALRISTCLHSLGAGVLGDGLGALGHRV 162


>ref|XP_005640222.1| PREDICTED: uncharacterized protein LOC100856160 [Canis lupus
           familiaris]
          Length = 596

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -3

Query: 312 AIHAKRVTIMPKDIQLARRIRGERA-*ALFCCLVADGLAVIRFRVWLFF 169
           AIHAKRVTIMPKDIQLARRIRGERA  + F      GLA +    + FF
Sbjct: 239 AIHAKRVTIMPKDIQLARRIRGERALNSYFLAATVLGLAALALAAFSFF 287


Top