BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006465
         (3520 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...  1429   0.0  
ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citr...  1420   0.0  
ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein...  1418   0.0  
ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein...  1405   0.0  
ref|XP_004513474.1| PREDICTED: RNA polymerase-associated protein...  1403   0.0  
gb|EOY30289.1| Binding isoform 1 [Theobroma cacao]                   1396   0.0  
gb|ESW10664.1| hypothetical protein PHAVU_009G228100g [Phaseolus...  1395   0.0  
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...  1394   0.0  
ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein...  1392   0.0  
ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein...  1389   0.0  
gb|EXB38929.1| RNA polymerase-associated protein CTR9-like prote...  1379   0.0  
ref|XP_006381640.1| phosphoprotein [Populus trichocarpa] gi|5503...  1370   0.0  
ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]     1370   0.0  
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...  1361   0.0  
ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [A...  1346   0.0  
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...  1346   0.0  
ref|XP_006296878.1| hypothetical protein CARUB_v10012866mg [Caps...  1323   0.0  
ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...  1314   0.0  
ref|XP_006396118.1| hypothetical protein EUTSA_v10002377mg [Eutr...  1309   0.0  
ref|XP_006396117.1| hypothetical protein EUTSA_v10002377mg [Eutr...  1309   0.0  

>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
            vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
            product [Vitis vinifera]
          Length = 1091

 Score = 1429 bits (3698), Expect = 0.0
 Identities = 725/1057 (68%), Positives = 854/1057 (80%), Gaps = 26/1057 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+ +F+
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HE STWVGKGQLLLAKGD++ A AAFKIVL+GDRDNV ALLGQACV F+RGRY +
Sbjct: 121  SRIDMHEASTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL+LYKRAL+V+P+CPAAVR+GI LC Y+L QFEKAR+AF+RVLQLDPENVEALVALGIM
Sbjct: 181  SLDLYKRALQVYPDCPAAVRVGIGLCCYKLGQFEKARKAFQRVLQLDPENVEALVALGIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L TNDA+GIR+GME+MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLHTNDASGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+KAG YYMASVKE +KP +FVLPYYGLGQVQLKLGD+RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKESNKPHDFVLPYYGLGQVQLKLGDFRS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            +L NFEKVLEVYPENCE+LKALGH+YV+L QT+KA E L+K TKID RDAQ +LDLGELL
Sbjct: 361  SLSNFEKVLEVYPENCEALKALGHIYVQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            I+SDT AALDA+KTA GLLKK GE+VPIELLNNIG+L+FE+GE +LAEQ F++A+GDG W
Sbjct: 421  ITSDTGAALDAFKTARGLLKKGGEEVPIELLNNIGVLYFERGEFELAEQTFKEAVGDGIW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L FID+K   YA DA  ++  +KD+Q+FH+LEEDG  +ELP NKV+++FNL RLLE+++ 
Sbjct: 481  LSFIDDKAYSYANDARTSMHHFKDMQLFHQLEEDGHFVELPWNKVTVLFNLARLLEQLNN 540

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            ++ A +LYRLILFK+ DY+DA+LRLAAIAKARNN++LSIELVG++LKV +K PN L MLG
Sbjct: 541  TKTASILYRLILFKFPDYIDAYLRLAAIAKARNNIQLSIELVGDALKVNDKGPNSLCMLG 600

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK TFR+AS+A +  D Y T+ LGNWNYFAA+  EKR A  LEA HL+K
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYATLSLGNWNYFAAIRSEKR-APKLEATHLEK 659

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ ANLYAANGA +V AEKG FDV+KDIFTQV EAASG+   QMPDVWIN
Sbjct: 660  AKELYTRVLVQHNANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWIN 719

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF LAVKMYQNCLRKF++N DSQVLLYLARTHYEAEQWQDCK+TLLRAIHL
Sbjct: 720  LAHVYFAQGNFALAVKMYQNCLRKFYYNTDSQVLLYLARTHYEAEQWQDCKKTLLRAIHL 779

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL KTK+TA+EVRS + E++ AVR+FSQLS     H HG
Sbjct: 780  APSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELKNAVRIFSQLSAASNLHFHG 839

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THV YCK +L+ AK+H E AEREE  N+ R+ELARQV L              
Sbjct: 840  FDEKKIETHVGYCKHLLEAAKVHCEAAEREELQNRHRVELARQVNLAEEARRKAEEQRKF 899

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTS-HSKRKDRTHSDDEEGEHSEXXXXXXXX 3042
                         V   E++F+RVKEQWKS + +SKRK+R+  DD+EG  SE        
Sbjct: 900  QLERRKQEDELKRVMQQEQHFERVKEQWKSNNLNSKRKERSQIDDDEGGQSERRRRKGGK 959

Query: 3043 XXXXDKNTKPRYESDEGEVDRGYEEDRMDGEEPN------------------NIALDPVA 3168
                DK+   RY+S+E   D   ++D M+ E+ N                  + A D +A
Sbjct: 960  RRKKDKS---RYDSEEARADAMDDQDEMEDEDTNMNHRESTNQMNNQDDDGEDDAQDLLA 1016

Query: 3169 AAGLEDSD--EDPGAQSGANRRRWALSESDDDERVDK 3273
            AAGLEDSD  +D    S  NRR+ A SESD+DE  D+
Sbjct: 1017 AAGLEDSDAEDDMAGPSSGNRRKRAWSESDEDEPQDQ 1053


>ref|XP_006451561.1| hypothetical protein CICLE_v10007295mg [Citrus clementina]
            gi|557554787|gb|ESR64801.1| hypothetical protein
            CICLE_v10007295mg [Citrus clementina]
          Length = 1088

 Score = 1420 bits (3675), Expect = 0.0
 Identities = 719/1059 (67%), Positives = 845/1059 (79%), Gaps = 28/1059 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M CVYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGKV++F+
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALG Y++YLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A +AFKIVLE DRDNV ALLGQACV F+RGRY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL+VHP+CP A+RLGI LCRY+L Q  KARQAF+R LQLDPENVEALVAL +M
Sbjct: 181  SLELYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ N+AAGIR+GME+MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+KAG YYMASVKE++KP EF+ PYYGLGQVQLKLGD+RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLE+YP+NCE+LKALGH+YV+L Q +KA E+L+K  KID RDAQ ++DLGELL
Sbjct: 361  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            ISSDT AALDA+KTA  LLKKAGE+VPIE+LNNIG++HFEKGE + A Q+F+DALGDG W
Sbjct: 421  ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L  +D K K   +DA A++ Q+KD+Q+FHR E DG  +ELP NKV+++FNL RLLE++H 
Sbjct: 481  LTLLDSKTKTNVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            +  A +LYRLILFK+ DYVDA+LRLAAIAKARNN++LSIELV E+LKV  K PN L+MLG
Sbjct: 541  TVAASVLYRLILFKHQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK TFRAAS+A +  D Y T+ LGNWNYFAAL  EKR A  LEA HL+K
Sbjct: 601  DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR-APKLEATHLEK 659

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT V+ Q+ +NLYAANGA +V AEKGQFDV+KD+FTQV EAASG+   QMPDVWIN
Sbjct: 660  AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF LA+KMYQNCLRKF++N D+Q+LLYLARTHYEAEQWQDCK++LLRAIHL
Sbjct: 720  LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 779

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL KT++TA+EVRS + E++ AVRVFS LS     HLHG
Sbjct: 780  APSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG 839

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THVEYCK +LD AKIHRE AEREEQ N+QR E ARQ  L              
Sbjct: 840  FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKY 899

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSKRKDRTHSDDEEGEHSEXXXXXXXX 3042
                         ++  EE+FQRVKEQW+ ST  SKR++R+ +DD+E  HSE        
Sbjct: 900  LLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGK 959

Query: 3043 XXXXDKNTKPRYESDEGEVDR--------------------GYEEDRMDGEEPNNIALDP 3162
                DK+++  YE++  E D                     G   D+ D  E N  A D 
Sbjct: 960  RRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEEN--ANDR 1017

Query: 3163 VAAAGLEDSDEDP--GAQSGANRRRWALSESDDDERVDK 3273
            +AAAGLEDSD D        A RRR ALSESDDDE  ++
Sbjct: 1018 LAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFER 1056


>ref|XP_006490821.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Citrus
            sinensis]
          Length = 1088

 Score = 1418 bits (3671), Expect = 0.0
 Identities = 718/1059 (67%), Positives = 844/1059 (79%), Gaps = 28/1059 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M CVYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGKV++F+
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALG Y++YLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGVYYTYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A +AFKIVLE DRDNV ALLGQACV F+RGRY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEADRDNVPALLGQACVEFNRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLE YKRAL+VHP+CP A+RLGI LCRY+L Q  KARQAF+R LQLDPENVEALVAL +M
Sbjct: 181  SLEFYKRALQVHPSCPGAIRLGIGLCRYKLGQLGKARQAFQRALQLDPENVEALVALAVM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ N+AAGIR+GME+MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLQANEAAGIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+KAG YYMASVKE++KP EF+ PYYGLGQVQLKLGD+RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHEFIFPYYGLGQVQLKLGDFRS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLE+YP+NCE+LKALGH+YV+L Q +KA E+L+K  KID RDAQ ++DLGELL
Sbjct: 361  ALTNFEKVLEIYPDNCETLKALGHIYVQLGQIEKAQELLRKAAKIDPRDAQAFIDLGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            ISSDT AALDA+KTA  LLKKAGE+VPIE+LNNIG++HFEKGE + A Q+F+DALGDG W
Sbjct: 421  ISSDTGAALDAFKTARTLLKKAGEEVPIEVLNNIGVIHFEKGEFESAHQSFKDALGDGIW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L  +D K K   +DA A++ Q+KD+Q+FHR E DG  +ELP NKV+++FNL RLLE++H 
Sbjct: 481  LTLLDSKTKTNVIDASASMLQFKDMQLFHRFENDGNHVELPWNKVTVLFNLARLLEQIHD 540

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            +  A +LYRLILFK+ DYVDA+LRLAAIAKARNN++LSIELV E+LKV  K PN L+MLG
Sbjct: 541  TVAASVLYRLILFKHQDYVDAYLRLAAIAKARNNLQLSIELVNEALKVNGKYPNALSMLG 600

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK TFRAAS+A +  D Y T+ LGNWNYFAAL  EKR A  LEA HL+K
Sbjct: 601  DLELKNDDWVKAKETFRAASDATDGKDSYATLSLGNWNYFAALRNEKR-APKLEATHLEK 659

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT V+ Q+ +NLYAANGA +V AEKGQFDV+KD+FTQV EAASG+   QMPDVWIN
Sbjct: 660  AKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWIN 719

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF LA+KMYQNCLRKF++N D+Q+LLYLARTHYEAEQWQDCK++LLRAIHL
Sbjct: 720  LAHVYFAQGNFALAMKMYQNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHL 779

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL KT++TA+EVRS + E++ AVRVFS LS     HLHG
Sbjct: 780  APSNYTLRFDAGVAMQKFSASTLQKTRRTADEVRSTVAELENAVRVFSHLSAASNLHLHG 839

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THVEYCK +LD AKIHRE AEREEQ N+QR E ARQ  L              
Sbjct: 840  FDEKKINTHVEYCKHLLDAAKIHREAAEREEQQNRQRQEAARQAALAEEARRKAEEQKKY 899

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSKRKDRTHSDDEEGEHSEXXXXXXXX 3042
                         ++  EE+FQRVKEQW+ ST  SKR++R+ +DD+E  HSE        
Sbjct: 900  LLEKRKLEDEQKRLRQQEEHFQRVKEQWRSSTPASKRRERSENDDDEVGHSEKRRRKGGK 959

Query: 3043 XXXXDKNTKPRYESDEGEVDR--------------------GYEEDRMDGEEPNNIALDP 3162
                DK+++  YE++  E D                     G   D+ D  E N  A D 
Sbjct: 960  RRKKDKSSRSHYETEYAEADMMDYREEPEDEDASMNYREPIGQMNDQDDDVEEN--ANDR 1017

Query: 3163 VAAAGLEDSDEDP--GAQSGANRRRWALSESDDDERVDK 3273
            +AAAGLEDSD D        A RRR ALSESDDDE  ++
Sbjct: 1018 LAAAGLEDSDVDDEMAPSITAARRRRALSESDDDEPFER 1056


>ref|XP_006587039.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1089

 Score = 1405 bits (3636), Expect = 0.0
 Identities = 720/1051 (68%), Positives = 840/1051 (79%), Gaps = 24/1051 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWLVIAREYFKQGK+ +F+
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +ID+YYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAFKIVL+GDRDNV ALLGQACV F+RGRY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL V+P+CPAAVRLGI LCRY+L QFEKA+QAFERVLQLDPENVEALVAL IM
Sbjct: 181  SLELYKRALLVYPDCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVEALVALAIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L+TN+A GIR GM +MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDYDKAG YYMASVKEV+KP EFV PYYGLGQVQ+KLGD++S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LKALGH+YV+L QTDK  + ++K TKID RDAQ +L+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            I SDT AALDA+KTA  L KK G++VPIELLNNIG+L FE+GE +LA+Q F++ALGDG W
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNIGVLQFERGEFELAQQTFKEALGDGVW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L FI+E EKK ++DA  +  Q+KD+++FH LE +G  +E+P +KV+++FNL RLLE+++ 
Sbjct: 481  LSFINE-EKKSSIDAATSTLQFKDMKLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLND 539

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            S  A +LYRL+LFKY DY+DA+LRLAAIAKARNN+ LSIELV ++LKV  KCPN L+MLG
Sbjct: 540  SGTASILYRLVLFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK T RAAS+A E  D Y ++ LGNWNYFAA+  EKR    LEA HL+K
Sbjct: 600  ELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNWNYFAAVRNEKRN-PKLEATHLEK 658

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ +NLYAANGAA+V AEKG FDV+KDIFTQV EAASG+   QMPDVWIN
Sbjct: 659  AKELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWIN 718

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNFTLAVKMYQNCLRKF+ N DSQ+LLYLARTHYEAEQWQDC +TLLRAIHL
Sbjct: 719  LAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHL 778

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL K K+TA+EVR+ + E+Q AVRVFSQLS     H+HG
Sbjct: 779  APSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHG 838

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKIDTHV YC  +L  AK+H E AEREEQ  +QR ELARQV                
Sbjct: 839  FDEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVAFAEEARRKAEEQRKF 898

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHSKRKDRTHSDDEEGEHS-EXXXXXXXX 3042
                         V+  EE+F+RVKEQWKS+SHSKR++R  SDDEEG  + E        
Sbjct: 899  QMERRKQEDELKRVQQQEEHFRRVKEQWKSSSHSKRRER--SDDEEGGGTGEKKRKKGGK 956

Query: 3043 XXXXDKNTKPRYESDEGEVDRGYEEDRMDGEEPNNIALDP---------------VAAAG 3177
                DK++K RY+++E E D   E++  D E   N   +P               +AAAG
Sbjct: 957  RRKKDKHSKSRYDTEEPENDMMDEQEMEDEEADINYREEPQTQMNDDAEENAQGLLAAAG 1016

Query: 3178 LEDSDED---PGAQSGANRRRWALSESDDDE 3261
            LEDSD D   P   S   RRR ALSESDDDE
Sbjct: 1017 LEDSDADEEAPAPSSSIARRRQALSESDDDE 1047


>ref|XP_004513474.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog isoform X1
            [Cicer arietinum]
          Length = 1080

 Score = 1403 bits (3632), Expect = 0.0
 Identities = 721/1048 (68%), Positives = 844/1048 (80%), Gaps = 19/1048 (1%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRVNLDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGKV +F+
Sbjct: 1    MASVYIPVQNSEEEVRVNLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +ID+YYAD++YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDDYYADIRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAFKIVL+GDRDNV ALLGQACV F+RGRY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL+V+PNCPAAVRLGI LCRY+L QFEKARQAFERVLQLDPENVEALVAL IM
Sbjct: 181  SLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L+TN+A GIR+GM +MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLRTNEAVGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDYDKAG YYMASVKE+SKP EFV PYYGLGQVQ+KLGD+RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LKAL ++YV+L QTDK  E ++K TKID RDAQ +L+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALAYIYVQLGQTDKGQEFIRKATKIDPRDAQAFLELGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            I SDT AALDA+KTA  L KK GE+VPIELLNNIG+L FE+GE +LA+Q F++ALGDG W
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGGEEVPIELLNNIGVLQFERGEFELAKQTFKEALGDGIW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L F  E  K  ++DA  +  Q+KD+Q+FH LE +G  +++P +KV+++FNLGRLLE++++
Sbjct: 481  LSFFSETNKS-SIDAATSTLQFKDMQLFHDLESNGHHIDVPWDKVTVLFNLGRLLEQLNE 539

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            S  A +LYRLILFKY DY+DA+LRLAAIAKARNN+ LSIELV ++LKV +KCPN L+MLG
Sbjct: 540  SGTASILYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNDKCPNALSMLG 599

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK T RAAS+A +  D Y T+ LGNWNYFAA+  EKR    LEA HL+K
Sbjct: 600  ELELKNDDWVKAKETLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRN-PKLEATHLEK 658

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ ANLYAANGAA+V AEKG FDV+KDIFTQV EAASG+   QMPDVWIN
Sbjct: 659  AKELYTRVLIQHSANLYAANGAAVVFAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWIN 718

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNFTLAVKMYQNCLRKF+ N DSQVLLYLARTHYEAEQWQDC +TL RAIHL
Sbjct: 719  LAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQVLLYLARTHYEAEQWQDCIKTLQRAIHL 778

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL K K+TA+EVR+ +  +Q AVR+FSQLS     H+HG
Sbjct: 779  APSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAGLQNAVRIFSQLSAASNLHIHG 838

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKIDTHV YC  +L  AK+H E AEREEQ  ++R ELARQV L              
Sbjct: 839  FDEKKIDTHVGYCTHLLSAAKVHLEAAEREEQQIRERHELARQVALAEDARRKAEEQRKF 898

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHSKRKDRTHSDDEEGEHS-EXXXXXXXX 3042
                         V+  EE+F+RVKEQWKS++HSKR++R  SDDE+G  + E        
Sbjct: 899  QMERRKQEDEIKQVQQQEEHFKRVKEQWKSSTHSKRRER--SDDEDGGGAGEKKRRKGGK 956

Query: 3043 XXXXDKNTKPRYESDEGEVDRGYE---EDRMDGEEP----NNIALDP---VAAAGLEDS- 3189
                DK++K R +++E E D   E   ED  D  EP    N++  +P   +AAAGLEDS 
Sbjct: 957  KRKKDKHSKSRNDTEEMEADMMDEQEMEDDADMNEPQTQMNDVEENPHGLLAAAGLEDSD 1016

Query: 3190 --DEDPGAQSGANRRRWALSESDDDERV 3267
              DE  G  S  +RRR ALSESDDDE +
Sbjct: 1017 AEDEPVGPSSTISRRRQALSESDDDEPI 1044


>gb|EOY30289.1| Binding isoform 1 [Theobroma cacao]
          Length = 1094

 Score = 1396 bits (3614), Expect = 0.0
 Identities = 714/1055 (67%), Positives = 842/1055 (79%), Gaps = 28/1055 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M CVYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAFKIVLEGDRDNV ALLGQACV F+R RY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQAFAAFKIVLEGDRDNVPALLGQACVEFNRSRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL+V PNCP AVRLGI LCRY+L QFEKAR AF+RVLQLD ENVEALVAL IM
Sbjct: 181  SLELYKRALQVFPNCPGAVRLGIGLCRYKLGQFEKARLAFQRVLQLDSENVEALVALAIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ N+A+GI++GM++M+ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLQANEASGIQKGMDKMRRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+KAG YYMAS+KE++KP EFV PYYGLGQV+LK GD+RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGFYYMASIKEINKPHEFVFPYYGLGQVKLKSGDFRS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LKALGH+YV+L Q +KA E ++K  KID RDAQ +LDLGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQVEKAQEFMRKAIKIDPRDAQAFLDLGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            ISSDT AALDA+KTA  L++K G+ VPIE+LNNIG+LHFE+ E +LA ++   ALGDG W
Sbjct: 421  ISSDTGAALDAFKTARSLMEKGGQAVPIEVLNNIGVLHFEREEFELALESLNKALGDGIW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L+    K K Y ++A A++  YKD+Q+FHRLEEDG+ +ELP NKV++VFNL RL E++H 
Sbjct: 481  LILTGNKPKSYVIEASASILDYKDMQLFHRLEEDGLPVELPWNKVTVVFNLARLHEQLHN 540

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            +  A +LY LILFKY DYVDA+LRLAAIAKAR+N++LSIELV E+LKV +KCPN L+MLG
Sbjct: 541  TGTANILYHLILFKYPDYVDAYLRLAAIAKARSNLQLSIELVNEALKVNDKCPNALSMLG 600

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK TFR+AS+A +  D Y  + LGNWNYFAA+  EKR A  LEA HL+K
Sbjct: 601  DLELKNDDWVKAKETFRSASDATDGKDSYAILSLGNWNYFAAIRNEKR-APKLEATHLEK 659

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ ANLYAANGA +V AEKG FDV+KDIFTQV EAASG+   QMPDVWIN
Sbjct: 660  AKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWIN 719

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHV+FAQGNF LAVKMYQNCLRKF++N DSQ+LLYLARTHYEAEQWQ+CK+TLLRAIHL
Sbjct: 720  LAHVFFAQGNFALAVKMYQNCLRKFYYNTDSQILLYLARTHYEAEQWQECKKTLLRAIHL 779

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFS STL K K+TA+EVRS + E++ AVR+FSQLS     HLHG
Sbjct: 780  APSNYTLRFDAGVAMQKFSTSTLQKEKRTADEVRSTVAELENAVRIFSQLSAASNLHLHG 839

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THVEYCK +L  AK+HRE AEREEQ N+Q+ E ARQ+ L              
Sbjct: 840  FDEKKINTHVEYCKHLLVAAKVHREAAEREEQQNRQKQEAARQLALAEEARRKAEEQRKY 899

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSKRKDRTHSDDEEGEHSEXXXXXXXX 3042
                         ++  EE+F+RV+EQWK ST  SKR++R+  DDE+G HSE        
Sbjct: 900  LLERRKQEDEQKRLQQAEEHFKRVQEQWKSSTPASKRRERSEVDDEDGGHSE-KRRKGGK 958

Query: 3043 XXXXDKNTKPRYESDEGE--------------VDRGYEED--RMDGEEPNN--IALDPVA 3168
                DKN K RYE D+ E               +  YEE   +M+ ++ +N   A D +A
Sbjct: 959  RRKKDKN-KSRYERDDEEPYMMDDREELGDEDANMNYEESTTQMNDQDDDNGENAQDLLA 1017

Query: 3169 AAGLEDSD-EDPGA---QSGANRRRWALSESDDDE 3261
            AAGLEDSD ED  A    S A RRR A SESDDDE
Sbjct: 1018 AAGLEDSDVEDEAAAAPSSAAGRRRRAWSESDDDE 1052


>gb|ESW10664.1| hypothetical protein PHAVU_009G228100g [Phaseolus vulgaris]
          Length = 1082

 Score = 1395 bits (3612), Expect = 0.0
 Identities = 715/1046 (68%), Positives = 839/1046 (80%), Gaps = 19/1046 (1%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+ +F+
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +ID+YYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAFKIVL+G RDNV ALLGQACV F+RGRY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGVRDNVPALLGQACVEFNRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL+LYKRAL+V PNCPAAVRLGI LCRY+L QFEKA+QAFERVL LDPENVEALVAL IM
Sbjct: 181  SLDLYKRALQVFPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLHLDPENVEALVALAIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L+TN+A GIR+GM +MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLRTNEAIGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDYDKAG YYMASVKEV+KP EFV PYYGLGQVQ+KLGD++S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQVKLGDFKS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LKAL H+YV+L QTDK  + +++ TKID RDAQ +L+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALAHIYVQLGQTDKGQDFIRRATKIDPRDAQAFLELGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            I SDT AALDA+KTA  L KK G++VPIELLNN+G+L FE+GE +LA+Q F++ALGDG W
Sbjct: 421  ILSDTGAALDAFKTARTLFKKGGQEVPIELLNNVGVLQFERGEFELAQQTFKEALGDGIW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
              FI+E EKK +VDA  +  Q+KD+Q+FH  E +G  +E+P +KV+++FNL RLLE++++
Sbjct: 481  QSFINE-EKKSSVDAATSTLQFKDMQLFHDFESNGHHVEVPLDKVTVLFNLARLLEQLNE 539

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            S  A +LYRLILFKY DY+DA+LRLAAIAK RNN+ LSIELV ++LKV +KCPN L+MLG
Sbjct: 540  SGTASILYRLILFKYPDYIDAYLRLAAIAKDRNNILLSIELVNDALKVNDKCPNALSMLG 599

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK T RAAS+A E  D Y T+ LGNWNYFAA+  EKR    LEA HL+K
Sbjct: 600  ELELKNDDWVKAKETLRAASDATEGKDSYATLSLGNWNYFAAVRNEKRN-PKLEATHLEK 658

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ +NLYAANGAA+V AEKG FDV+KDIFTQV EAASG+   QMPDVWIN
Sbjct: 659  AKELYTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWIN 718

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF LAVKMYQNCLRKF+ N DSQ+LLYLARTHYEAEQWQDC +TLLRAIHL
Sbjct: 719  LAHVYFAQGNFALAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHL 778

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL K K+TA+EVR+ + E+Q AVRVFSQLS     H+HG
Sbjct: 779  APSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHG 838

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKIDTHV YC  +L  AK+H E AEREEQ  +QR ELARQV L              
Sbjct: 839  FDEKKIDTHVGYCTHLLTAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKF 898

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHSKRKDRTHSDDEEGEHSEXXXXXXXXX 3045
                         V+  EE+F+RVKEQWKS SHSKR++R  SDDEEG   E         
Sbjct: 899  QMERRKQEDELKRVQQQEEHFKRVKEQWKSNSHSKRRER--SDDEEGGTGEKKKRKSGKK 956

Query: 3046 XXXDKNTKPRYESDEGEVDRGYEEDRMDGEEPNNIALDP-----------VAAAGLEDS- 3189
               DK++K RY+++E E D   +E  M+ EE +    +P           +AAAGLEDS 
Sbjct: 957  RKKDKHSKSRYDTEEPEADM-MDEQEMEDEEGDVYREEPQTHGEENAHGLLAAAGLEDSD 1015

Query: 3190 -DEDPGAQSGA-NRRRWALSESDDDE 3261
             DE+ GA S +  RRR ALSES+DDE
Sbjct: 1016 ADEEMGAPSSSIARRRQALSESEDDE 1041


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
            max]
          Length = 1088

 Score = 1394 bits (3607), Expect = 0.0
 Identities = 714/1050 (68%), Positives = 834/1050 (79%), Gaps = 23/1050 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+ +++
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQYR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAFKIVL+GD DNV ALLGQACV F+RGR+ +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKR L+V+PNCPAAVRLGI LCRY+L QFEKA+QAFERVLQLDPENVE+L+AL IM
Sbjct: 181  SLELYKRVLQVYPNCPAAVRLGIGLCRYKLGQFEKAQQAFERVLQLDPENVESLIALAIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L+TN+A GIR GM +MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 241  DLRTNEATGIRTGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDYDKAG YYMASVKEV+KP EFV PYYGLGQVQ+KLGD++S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQIKLGDFKS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LKALGH+YV+L QTDK  + ++K TKID RDAQ +L+LGELL
Sbjct: 361  ALSNFEKVLEVYPDNCETLKALGHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            I SDT AALDA+KTA  L KK G++VPIELLNNIG+L FE+GE +LA Q F++ALGDG W
Sbjct: 421  ILSDTGAALDAFKTAHTLFKKGGQEVPIELLNNIGVLQFERGEFELARQTFKEALGDGVW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L FI+E E K ++DA  +  Q+KD+Q+FH LE +G  +E+P +KV+++FNL RLLE+++ 
Sbjct: 481  LSFINE-ENKSSIDAATSTLQFKDMQLFHDLESNGHHVEVPWDKVTVLFNLARLLEQLYD 539

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            S  A + YRLILFKY DY+DA+LRLAAIAKARNN+ LSIELV ++LKV  KCPN L+MLG
Sbjct: 540  SGTASIFYRLILFKYPDYIDAYLRLAAIAKARNNILLSIELVNDALKVNNKCPNALSMLG 599

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK T R AS+A +  D Y T+ LGNWNYFAA+  EKR    LEA HL+K
Sbjct: 600  ELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNWNYFAAVRNEKRN-PKLEATHLEK 658

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +L T VL Q+ +NLYAANGAA+V AEKG FDV+KDIFTQV EAASG+   QMPDVWIN
Sbjct: 659  AKELCTRVLIQHSSNLYAANGAAVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWIN 718

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNFTLAVKMYQNCLRKF+ N DSQ+LLYLARTHYEAEQWQDC +TLLRAIHL
Sbjct: 719  LAHVYFAQGNFTLAVKMYQNCLRKFYHNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHL 778

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL K K+TA+EVR+ + E+Q AVRVFSQLS     H+HG
Sbjct: 779  APSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHG 838

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKIDTHV YC  +L  AK+H E AE EEQ  +QR ELARQV L              
Sbjct: 839  FDEKKIDTHVGYCNHLLSAAKVHLEAAEHEEQQVRQRQELARQVALAEEARRKAEEQRKF 898

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHSKRKDRTHSDDEEGEHSEXXXXXXXXX 3045
                         V+  EE+F+RVKEQWKS+SHSKR++R  SDDEEG   E         
Sbjct: 899  QMERRKQEDELKRVQKQEEHFRRVKEQWKSSSHSKRRER--SDDEEGGTGEKKRKKGGKR 956

Query: 3046 XXXDKNTKPRYESDEGEVD----RGYEEDRMD---GEEPNNIALDP--------VAAAGL 3180
               DK++K RY+++E E D    +G E++  D    EEP     D         +AAAGL
Sbjct: 957  RKKDKHSKLRYDAEEPEDDLMDEQGMEDEEADINYREEPQTQMNDDAEENAQGLLAAAGL 1016

Query: 3181 EDSDED---PGAQSGANRRRWALSESDDDE 3261
            EDSD D       S   RRR ALSESDDDE
Sbjct: 1017 EDSDADEETAAPSSSIARRRQALSESDDDE 1046


>ref|XP_006342363.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
            tuberosum]
          Length = 1095

 Score = 1392 bits (3603), Expect = 0.0
 Identities = 713/1081 (65%), Positives = 843/1081 (77%), Gaps = 50/1081 (4%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGKV +F+
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKGD++ A AAFKIVL+GDRDNV ALLGQACV F RGRY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGDVEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL+V+P+CPAAVRLGI LCRY+L Q +KA+QAF RVLQLDPENV+ALVAL I+
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYKLGQLDKAKQAFCRVLQLDPENVDALVALAIL 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ N+A+GIRRGME+MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA + H
Sbjct: 241  DLQNNEASGIRRGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+KAG YYMASVKE SKP EFVLPYYGLGQVQLKLGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKESSKPHEFVLPYYGLGQVQLKLGDLRS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            +L NFEKVLEV+PE+CE++KAL H+YV+L Q +K  E LKK TKID RD Q +LD+GELL
Sbjct: 361  SLANFEKVLEVHPESCEAVKALAHIYVQLGQAEKVQEYLKKATKIDPRDPQAFLDIGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            IS+D AAAL+A+KTA  LLKK+ E+VPIELLNNIG+LHFE+ E +LA Q+F++ALGDG W
Sbjct: 421  ISNDPAAALEAFKTARNLLKKSNEEVPIELLNNIGVLHFEREEFELATQSFKEALGDGIW 480

Query: 1621 LLFIDEKEK------------------------KYAVDACAALDQYKDVQIFHRLEEDGI 1728
            + F+D K +                        +Y +DA A++ QYKD+Q+FHRLEE G 
Sbjct: 481  MRFLDAKARSDDPTSGGLLYPNGEAQSDLLKSAQYPIDASASVRQYKDLQLFHRLEEQGS 540

Query: 1729 SMELPSNKVSIVFNLGRLLEEMHKSQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVR 1908
            ++ELP NKVS +FN+ RLLE++H ++ A + YRLILFKY +Y DA+LRLA+IAKARNNV+
Sbjct: 541  TVELPWNKVSTLFNMARLLEQLHDTETASIFYRLILFKYPEYADAYLRLASIAKARNNVQ 600

Query: 1909 LSIELVGESLKVKEKCPNGLTMLGGLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGN 2088
            LS EL+ ++LKV EK P+ L MLG LELKN +WVKAK TFRAA +A + ND Y T+CLGN
Sbjct: 601  LSNELISDALKVNEKYPDALLMLGDLELKNDDWVKAKETFRAAKDATDGNDSYATLCLGN 660

Query: 2089 WNYFAALEGEKRKASNLEAIHLDKAGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAK 2268
            WNYFAA+  EKR A  LEA HL+KA +LYT VL Q+ ANLYAANGA +V AEKGQFD++K
Sbjct: 661  WNYFAAIRNEKR-APKLEATHLEKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISK 719

Query: 2269 DIFTQVLEAASGNTLAQMPDVWINVAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLY 2448
            D+FTQV EAASGN   QMPDVWIN+AHV+FAQGNF LAVKMYQNCLRKF++N DSQVLLY
Sbjct: 720  DLFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFALAVKMYQNCLRKFYYNTDSQVLLY 779

Query: 2449 LARTHYEAEQWQDCKRTLLRAIHLAPSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSA 2628
            LARTHYEAEQWQDCK+TLLRAIHLAPSNY LRF+ GV +QKFSASTL KTK+T +EVR+ 
Sbjct: 780  LARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDTGVALQKFSASTLQKTKRTVDEVRAT 839

Query: 2629 ILEVQTAVRVFSQLS-----HLHGFDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQ 2793
            + E++ AVR+FS LS     H+HGFDEKKI+THV YCK +L+ AK+H E AERE+Q NKQ
Sbjct: 840  VAELKNAVRLFSLLSAASNLHVHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQ 899

Query: 2794 RLELARQVTLXXXXXXXXXXXXXXXXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSK 2970
            R+ELARQVTL                           V   E++ +R+KEQWK ST  SK
Sbjct: 900  RIELARQVTLAEENRRKAEEQRKYQLERRKQEDELKQVMQQEQHLERIKEQWKSSTPASK 959

Query: 2971 RKDRTHSDDEEGEHSEXXXXXXXXXXXXDKNTKPRYESDEGE-----------VDR---- 3105
            RKDR  ++D+EG H E            DK  K  YES+E E           VDR    
Sbjct: 960  RKDRPQNEDDEGGHGERRRKKGGKRRKRDK--KSHYESEEAEAEMDDQEEVDDVDRNRNY 1017

Query: 3106 --GYEEDRMDGEEPNNIALDPVAAAGLEDSDEDP---GAQSGANRRRWALSESDDDERVD 3270
               Y++     ++  N   D +AAAGLEDSD +       S A+RRR ALSESD+DE + 
Sbjct: 1018 EESYDQTNDHDDQAENNPQDLLAAAGLEDSDAEDDTVAPSSNASRRRQALSESDEDEPLQ 1077

Query: 3271 K 3273
            +
Sbjct: 1078 R 1078


>ref|XP_004243718.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Solanum
            lycopersicum]
          Length = 1095

 Score = 1389 bits (3596), Expect = 0.0
 Identities = 711/1079 (65%), Positives = 839/1079 (77%), Gaps = 48/1079 (4%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGKV +F+
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFIMATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKGDI+ A AAFKIVL+GDRDNV ALLGQACV F RGRY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGDIEQAFAAFKIVLDGDRDNVPALLGQACVQFSRGRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL+V+P+CPAAVRLGI LCRY+L QF+KA+QAF RVLQLDPENV+ALVAL I+
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYKLGQFDKAKQAFCRVLQLDPENVDALVALAIL 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ N+A+GIRRGME+MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA + H
Sbjct: 241  DLQNNEASGIRRGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+KAG YYMASVKE SKP +FVLPYYGLGQVQLKLGD RS
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGMYYMASVKESSKPHDFVLPYYGLGQVQLKLGDLRS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            +L NFEKVLEV+PE+CE++KAL H+YV+L Q +K  E LKK TKID RD Q +LD+GELL
Sbjct: 361  SLANFEKVLEVHPESCEAVKALAHIYVQLGQAEKVQEYLKKATKIDPRDPQAFLDIGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            IS+D AAAL+A+KTA  LLKK+ E+VPIELLNNIG+LHFE+ E +LA Q+F++ALGDG W
Sbjct: 421  ISNDPAAALEAFKTARNLLKKSNEEVPIELLNNIGVLHFEREEFELATQSFKEALGDGIW 480

Query: 1621 LLFIDEKEK------------------------KYAVDACAALDQYKDVQIFHRLEEDGI 1728
            + F+D K +                        +Y +DA A++ QYKD Q+F RLEE GI
Sbjct: 481  IRFLDAKARSNDPTSGGLLYGNGETQSDLLKSAQYPIDASASVRQYKDFQLFDRLEEQGI 540

Query: 1729 SMELPSNKVSIVFNLGRLLEEMHKSQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVR 1908
            ++ELP NKVS +FN+ RLLE++H ++ A + YR ILFKY +Y DA+LRLA+IAKARNNV+
Sbjct: 541  TVELPWNKVSTLFNMARLLEQLHDTETASIFYRHILFKYPEYADAYLRLASIAKARNNVQ 600

Query: 1909 LSIELVGESLKVKEKCPNGLTMLGGLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGN 2088
            LS EL+ ++LKV EK P+ L MLG LELKN +WVKAK TFRAA +A + ND Y T+CLGN
Sbjct: 601  LSNELISDALKVNEKYPDALLMLGDLELKNDDWVKAKETFRAAKDATDGNDSYATLCLGN 660

Query: 2089 WNYFAALEGEKRKASNLEAIHLDKAGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAK 2268
            WNYFAA+  EKR A  LEA HL+KA +LYT VL Q+ ANLYAANGA +V AEKGQFD++K
Sbjct: 661  WNYFAAIRNEKR-APKLEATHLEKAKELYTKVLFQHNANLYAANGAGVVLAEKGQFDISK 719

Query: 2269 DIFTQVLEAASGNTLAQMPDVWINVAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLY 2448
            D+FTQV EAASGN   QMPDVWIN+AHV+FAQGNF LAVKMYQNCLRKF+ N DSQVLLY
Sbjct: 720  DLFTQVQEAASGNVFVQMPDVWINLAHVHFAQGNFALAVKMYQNCLRKFYHNTDSQVLLY 779

Query: 2449 LARTHYEAEQWQDCKRTLLRAIHLAPSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSA 2628
            LARTHYEAEQWQDCK+TLLRAIHLAPSNY LRF+ GV +QKFSASTL KTK+T +EVR+ 
Sbjct: 780  LARTHYEAEQWQDCKKTLLRAIHLAPSNYTLRFDTGVALQKFSASTLQKTKRTVDEVRAT 839

Query: 2629 ILEVQTAVRVFSQLS-----HLHGFDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQ 2793
            + E++ AVR+FS LS     H+HGFDEKKI+THV YCK +L+ AK+H E AERE+Q NKQ
Sbjct: 840  VAELKNAVRLFSLLSAASNLHVHGFDEKKIETHVGYCKHLLEAAKVHCEAAEREDQQNKQ 899

Query: 2794 RLELARQVTLXXXXXXXXXXXXXXXXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSK 2970
            R+ELARQVTL                           V   E++ +R+KEQWK ST  SK
Sbjct: 900  RIELARQVTLAEENRRKAEEQRKYQLERRKQEDELKQVMQQEQHLERIKEQWKSSTPASK 959

Query: 2971 RKDRTHSDDEEGEHSEXXXXXXXXXXXXDKNTKPRYESDEGEVDRGYEEDRMD------- 3129
            RKDR  ++D+EG H E            DK +   YE  E E+D   E D +D       
Sbjct: 960  RKDRPQNEDDEGGHGERRRKKGGKRRKRDKKSHYEYEEAEAEMDDQEEMDDVDRNRNYEE 1019

Query: 3130 --------GEEPNNIALDPVAAAGLEDSDEDPGA---QSGANRRRWALSESDDDERVDK 3273
                     ++  N   D +AAAGLEDSD +       S A+RRR ALSESD+DE + +
Sbjct: 1020 SYDQTNDHDDQAENNPQDLLAAAGLEDSDAEDDTVVPSSNASRRRQALSESDEDEPLQR 1078


>gb|EXB38929.1| RNA polymerase-associated protein CTR9-like protein [Morus notabilis]
          Length = 1107

 Score = 1379 bits (3568), Expect = 0.0
 Identities = 707/1076 (65%), Positives = 842/1076 (78%), Gaps = 45/1076 (4%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP+DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPKDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAFKIVL+GDRDNV ALLGQACV F+R RY +
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRVRYSD 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKR L+V+PNCPAAVRLGI LCRY+L QFEKARQAF+RVLQLDPENVEALVA  IM
Sbjct: 181  SLELYKRVLKVYPNCPAAVRLGIGLCRYKLGQFEKARQAFQRVLQLDPENVEALVAQAIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L T++A GIR+GME+MQ AFEIYPY AM+LNYLANHFFFTGQHF+VEQLTETALA SNH
Sbjct: 241  DLNTHEATGIRKGMEKMQKAFEIYPYCAMALNYLANHFFFTGQHFVVEQLTETALAVSNH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+KAG YYMASVKEV+KP EFV PYYGLGQVQLKLGD++S
Sbjct: 301  GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEVNKPNEFVFPYYGLGQVQLKLGDFKS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEV P+N E+LK LGH+YV+L QT+KA E ++K TKID RDAQ +LDLGELL
Sbjct: 361  ALANFEKVLEVNPDNSETLKVLGHIYVQLGQTEKAQEFMRKATKIDPRDAQAFLDLGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQ--------------- 1575
            ISSD  AAL++ KTA  LLKK G++ PIE+LNN+G+LHFE+GE +               
Sbjct: 421  ISSDPVAALESLKTARTLLKKGGQETPIEVLNNLGVLHFERGEFEVGAVSQEYFGSLYAV 480

Query: 1576 -LAEQAFRDALGDGAWLLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNK 1752
             LA+Q FR+ALGDG WL FID KE    VDA A+  QYKD+ +F  LE++G  ++LP NK
Sbjct: 481  VLAQQTFREALGDGIWLAFIDGKENPPPVDASASNLQYKDLHLFQHLEKEGRVVDLPWNK 540

Query: 1753 VSIVFNLGRLLEEMHKSQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGE 1932
            V+ +FN+ RLLE++H ++ A +LYRLILFKY DY+DA+LRLAAIAKARNN++LSIELV +
Sbjct: 541  VTTLFNMARLLEQLHNTETASILYRLILFKYPDYIDAYLRLAAIAKARNNLQLSIELVND 600

Query: 1933 SLKVKEKCPNGLTMLGGLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALE 2112
            ++KV +KCP  L+MLG LELKN +WVKAK T RAASEA E  D Y T+ LGNWNYFAA+ 
Sbjct: 601  AMKVNQKCPKALSMLGDLELKNDDWVKAKETLRAASEATEGKDSYDTLSLGNWNYFAAVR 660

Query: 2113 GEKRKASNLEAIHLDKAGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLE 2292
             EKR    LEA HL+KA +LYT VL Q+ ANLYAANGA +V AEKG FDV+KDIFTQV E
Sbjct: 661  NEKRN-PKLEATHLEKAKELYTKVLAQHSANLYAANGAGVVFAEKGHFDVSKDIFTQVQE 719

Query: 2293 AASGNTLAQMPDVWINVAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEA 2472
            AASG+   QMPDVWIN+AHVYFAQGNF LAVKMYQNCLRKF +N DSQ+LLYLART+YEA
Sbjct: 720  AASGSIFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFFYNTDSQILLYLARTNYEA 779

Query: 2473 EQWQDCKRTLLRAIHLAPSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAV 2652
            EQWQDCK+TLLRAIHLAPSNYALRF+ GVVMQKFSA TL K K+TA+EVR  + E+  AV
Sbjct: 780  EQWQDCKKTLLRAIHLAPSNYALRFDAGVVMQKFSALTLQKEKRTADEVRLTVSELGNAV 839

Query: 2653 RVFSQLS-------HLHGFDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELAR 2811
            RVF QLS       H +GFDEKKIDTHVEYCK +L+ A++H + AE EEQ N+ + E  R
Sbjct: 840  RVFKQLSASAASNLHFYGFDEKKIDTHVEYCKHLLEAARVHLKNAEHEEQKNRHKQEALR 899

Query: 2812 QVTLXXXXXXXXXXXXXXXXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSKRKDRTH 2988
            Q+ L                           V+  EE+F+R+KEQWK STS SKR+DR+ 
Sbjct: 900  QMALAEEARRKAEEQRKFQLERRVREDELKQVRQQEEHFERIKEQWKSSTSGSKRRDRSE 959

Query: 2989 SDDEEGEHSEXXXXXXXXXXXXDKNTKPRYESDEGEVDRGYEEDRMDGE-------EP-- 3141
             DDEEG +SE            DK+++ RYE+++ E +   +++ ++ E       EP  
Sbjct: 960  IDDEEGGNSEKRRRKGGKRRKKDKHSRSRYEAEDVEAEMMDDQEELEDENAKMNYGEPAA 1019

Query: 3142 ----------NNIALDPVAAAGLEDS--DEDPGAQSGANRRRWALSESDDDERVDK 3273
                         A DP+AAAGLEDS  +++   +S ANRR  A SESDDDE++D+
Sbjct: 1020 QINDQDDYAAEENARDPLAAAGLEDSGAEDEVAPESAANRRSRAWSESDDDEQLDR 1075


>ref|XP_006381640.1| phosphoprotein [Populus trichocarpa] gi|550336348|gb|ERP59437.1|
            phosphoprotein [Populus trichocarpa]
          Length = 1086

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 704/1053 (66%), Positives = 830/1053 (78%), Gaps = 26/1053 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+ +F+
Sbjct: 1    MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGK+ETK REK+E+F++AT+ YNKA
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAF+IVLEGDRDNVSALLGQACV + RG Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL L+KRAL+V+P+CP AVRLGI  C Y+L    KA  AF+R   LDPENVEALV+L I+
Sbjct: 181  SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQTN+AA IR+GME+MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 238  DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+ A RYY ASVKE++KP EFV PYYGLGQVQLKLG+ ++
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LK LGH+YV+L QT+KA E L+K  KID RDAQ +LDLGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            IS+DT AALDA+KTA  LLKK GE+VPIE+LNNI ++HFE+ EL+LA Q F++ALGDG W
Sbjct: 418  ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L F++ K   Y VDA ++L QYKD+QIF RLEE+G S+EL  NKV+ +FNL RLLE++H 
Sbjct: 478  LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 537

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            ++ A  LYRLILFKY DYVDA+LRLAAIAKARNN+ LSIELV E+L V +KCPN L+MLG
Sbjct: 538  TETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 597

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK TFRAASEA +  D Y T+ LGNWNYFAA+  EKR    LEA HL+K
Sbjct: 598  DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRN-PKLEATHLEK 656

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ ANLYAANGA +V AEKG FDV+KD+FTQV EAASG+   QMPDVWIN
Sbjct: 657  AKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWIN 716

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF LAVKMYQNCL+KF +N DSQ+LLYLARTHYEAEQWQDCKRTLLRAIHL
Sbjct: 717  LAHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHL 776

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
             PSNY LRF+ GV MQKFSASTL KTK+T +EVRS + E++ AVR+FSQLS     + +G
Sbjct: 777  TPSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNG 836

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THVEYCK +L+ A +HRE AEREEQ N+QRL+LARQ+ L              
Sbjct: 837  FDEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKF 896

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSKRKDRTHSDDEEGEHSEXXXXXXXX 3042
                         V+  EE+F+RVKEQWK STS SKR+DR   DD EG H E        
Sbjct: 897  QLERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDGEGGHGEKRRRKGGK 956

Query: 3043 XXXXDKNTKPRYESDEGEV-----------------DRGYE-EDRMDGEEPNNIALDPVA 3168
                +K+++ RYE +E ++                 + GY+  D+ D  E N  A D +A
Sbjct: 957  RRKKEKSSRSRYEMEEADMMDDHDEPEDDDANVNFREPGYQMNDQDDNAEEN--AQDVLA 1014

Query: 3169 AAGLEDS--DEDPGAQSGANRRRWALSESDDDE 3261
            AAGLEDS  D+D  A S A RR+ A SESD+DE
Sbjct: 1015 AAGLEDSDADDDAAAPSSAGRRKRAWSESDEDE 1047


>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
          Length = 1056

 Score = 1370 bits (3546), Expect = 0.0
 Identities = 704/1053 (66%), Positives = 830/1053 (78%), Gaps = 26/1053 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+ +F+
Sbjct: 1    MAFVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLDQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGK+ETK REK+E+F++AT+ YNKA
Sbjct: 61   QILEEGSSHEIDEYYADVRYERIAILNALGAYYSYLGKVETKQREKEEYFIQATKHYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+++ A AAF+IVLEGDRDNVSALLGQACV + RG Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFRIVLEGDRDNVSALLGQACVEYSRGHYGE 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL L+KRAL+V+P+CP AVRLGI  C Y+L    KA  AF+R   LDPENVEALV+L I+
Sbjct: 181  SLTLFKRALQVYPDCPGAVRLGIGHCHYKLGHVGKACLAFQR---LDPENVEALVSLAIL 237

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQTN+AA IR+GME+MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 238  DLQTNEAAAIRKGMEKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 297

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HSYYNLARSYHSKGDY+ A RYY ASVKE++KP EFV PYYGLGQVQLKLG+ ++
Sbjct: 298  GPTKSHSYYNLARSYHSKGDYETASRYYWASVKEINKPSEFVFPYYGLGQVQLKLGEIKN 357

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LK LGH+YV+L QT+KA E L+K  KID RDAQ +LDLGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELL 417

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            IS+DT AALDA+KTA  LLKK GE+VPIE+LNNI ++HFE+ EL+LA Q F++ALGDG W
Sbjct: 418  ISTDTGAALDAFKTARSLLKKGGEEVPIEVLNNIAVIHFEREELELALQNFKEALGDGIW 477

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L F++ K   Y VDA ++L QYKD+QIF RLEE+G S+EL  NKV+ +FNL RLLE++H 
Sbjct: 478  LTFLEGKANTYEVDATSSLLQYKDMQIFRRLEEEGHSVELSWNKVTTLFNLARLLEQLHN 537

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            ++ A  LYRLILFKY DYVDA+LRLAAIAKARNN+ LSIELV E+L V +KCPN L+MLG
Sbjct: 538  TETASTLYRLILFKYPDYVDAYLRLAAIAKARNNLPLSIELVNEALTVNDKCPNALSMLG 597

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK TFRAASEA +  D Y T+ LGNWNYFAA+  EKR    LEA HL+K
Sbjct: 598  DLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNWNYFAAIRNEKRN-PKLEATHLEK 656

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ ANLYAANGA +V AEKG FDV+KD+FTQV EAASG+   QMPDVWIN
Sbjct: 657  AKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFTQVQEAASGSIFVQMPDVWIN 716

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF LAVKMYQNCL+KF +N DSQ+LLYLARTHYEAEQWQDCKRTLLRAIHL
Sbjct: 717  LAHVYFAQGNFALAVKMYQNCLQKFFYNTDSQILLYLARTHYEAEQWQDCKRTLLRAIHL 776

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
             PSNY LRF+ GV MQKFSASTL KTK+T +EVRS + E++ AVR+FSQLS     + +G
Sbjct: 777  TPSNYTLRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSAASNLYFNG 836

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THVEYCK +L+ A +HRE AEREEQ N+QRL+LARQ+ L              
Sbjct: 837  FDEKKINTHVEYCKHLLEAAIVHREAAEREEQQNRQRLDLARQMALAEEARRKAEEQRKF 896

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSKRKDRTHSDDEEGEHSEXXXXXXXX 3042
                         V+  EE+F+RVKEQWK STS SKR+DR   DD EG H E        
Sbjct: 897  QLERRKQEDELKRVRQQEEHFERVKEQWKSSTSASKRRDRADIDDGEGGHGEKRRRKGGK 956

Query: 3043 XXXXDKNTKPRYESDEGEV-----------------DRGYE-EDRMDGEEPNNIALDPVA 3168
                +K+++ RYE +E ++                 + GY+  D+ D  E N  A D +A
Sbjct: 957  RRKKEKSSRSRYEMEEADMMDDHDEPEDDDANVNFREPGYQMNDQDDNAEEN--AQDVLA 1014

Query: 3169 AAGLEDS--DEDPGAQSGANRRRWALSESDDDE 3261
            AAGLEDS  D+D  A S A RR+ A SESD+DE
Sbjct: 1015 AAGLEDSDADDDAAAPSSAGRRKRAWSESDEDE 1047


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
            sativus]
          Length = 1074

 Score = 1361 bits (3523), Expect = 0.0
 Identities = 693/1055 (65%), Positives = 830/1055 (78%), Gaps = 25/1055 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M CVYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLL KG+++ A AAFKIVL+GDRDNV ALLGQACV F+RG Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL+V+P+CPAAVRLGI LCRY+L Q+ KA+QAFER   LDPENVEALV L I+
Sbjct: 181  SLELYKRALQVYPDCPAAVRLGIGLCRYQLKQYGKAQQAFER---LDPENVEALVGLAII 237

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L TN+A  IR GME+MQ AFEIYP+ AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 238  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 297

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HS+YNLARSYHSKGDY+KAG YYMAS KE +KP+EFV PYYGLGQVQLK+GD RS
Sbjct: 298  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 357

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LK LGH+YV+L Q +KA E L+K TKID RDAQ +LDLGELL
Sbjct: 358  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 417

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            IS+D +AALDA+KTA  LLKK G++VPIE+LNN+G+LHFE+ E +LAE+ F++ALGDG W
Sbjct: 418  ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 477

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L FID K +  A++A A++ QYKDV++F++LE +G ++ LP  KV+ +FNL RLLE++H+
Sbjct: 478  LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 537

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
             + + +LYRLILFKY DYVDA+LRLA+IAKARN V+LSIELV ++LKV +KC N L+MLG
Sbjct: 538  IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 597

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WV+AK TFRAA EA +  D Y T+ LGNWNYFAAL  EKR    LEA HL+K
Sbjct: 598  ELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRN-PKLEATHLEK 656

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            + +LYT VL Q+PANLYAANGA ++ AEKGQFDV+KDIFTQV EAASGN   QMPDVWIN
Sbjct: 657  SKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWIN 716

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF+LAVKMYQNCLRKF++N D Q+LLYLART+YEAEQWQDCK+TLLRAIHL
Sbjct: 717  LAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHL 776

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL KTK+TA+EVRS + E++ AVRVFSQLS     H HG
Sbjct: 777  APSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHG 836

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKIDTHV YCK +L+ A +H + AE EEQ  +QR ELARQV L              
Sbjct: 837  FDEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKF 896

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHSKRKDRTHSDDEEGEHSEXXXXXXXXX 3045
                         +   E++F+RVKEQWKS + +KR++R+  DD+E  +SE         
Sbjct: 897  QLERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKR 956

Query: 3046 XXXDKNTKPRYESDEGEVDR-------------GYEEDRM----DGEEPNNIALDPVAAA 3174
               D+  K  YE++E + D               Y E R      G++      D +A A
Sbjct: 957  RKKDRKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEA 1016

Query: 3175 GLEDSDEDPGA---QSGANRRRWALSESDDDERVD 3270
            GLEDSD +  A    S A RRR   S+S++DE +D
Sbjct: 1017 GLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPID 1051


>ref|XP_006849650.1| hypothetical protein AMTR_s00024p00227830 [Amborella trichopoda]
            gi|548853225|gb|ERN11231.1| hypothetical protein
            AMTR_s00024p00227830 [Amborella trichopoda]
          Length = 1078

 Score = 1346 bits (3483), Expect = 0.0
 Identities = 684/1050 (65%), Positives = 820/1050 (78%), Gaps = 19/1050 (1%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M CVYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDATDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYA V YER+A+LNALGAY+ YLGKIETK REK++HF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYAGVTYERIAMLNALGAYYCYLGKIETKQREKEDHFISATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RI++HEPSTWVGKGQLLLAKGD++ A  AFKIVL+G  DN+ ALLGQACV F+ GRY+E
Sbjct: 121  SRINMHEPSTWVGKGQLLLAKGDLEQASNAFKIVLDGQPDNIPALLGQACVKFNNGRYME 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRALR +PNCPAAVRLG+ LCRY+L QF+KARQAF+RVLQLDPENVEALVALG+M
Sbjct: 181  SLELYKRALRGNPNCPAAVRLGLGLCRYKLGQFDKARQAFQRVLQLDPENVEALVALGVM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQT++A  I  GME+MQ AFE YPY AM+LNYLANHFFFTGQHFLVEQLTETALA  +H
Sbjct: 241  DLQTDEAIAIHSGMEKMQRAFERYPYCAMALNYLANHFFFTGQHFLVEQLTETALALGDH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
               K+HSYYNLARSYHSKGDY+KAGRYYMAS+KE ++PQ+FVLPYYGLGQVQLKLG+ +S
Sbjct: 301  VMMKSHSYYNLARSYHSKGDYEKAGRYYMASIKECNRPQDFVLPYYGLGQVQLKLGELKS 360

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYPENCESLKA+GH++ +L QT+KA+++ +K T+ID RDAQ +L+LGELL
Sbjct: 361  ALSNFEKVLEVYPENCESLKAVGHIHAQLGQTEKALDIFRKATRIDPRDAQAFLELGELL 420

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            +SSDT AALDA +TA GLLKK GE+V +ELLNNIG+LHFE+GE +LA+Q F++ALG+G W
Sbjct: 421  VSSDTGAALDALRTARGLLKKGGEEVSVELLNNIGVLHFERGEFELADQTFKEALGEGIW 480

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L F+D K    +VDA A   QYKD   F +LEEDG  +ELP +KV+ +FN  RLLE++H 
Sbjct: 481  LSFMDGKIYPPSVDARAFAMQYKDFSFFQKLEEDGTPLELPWDKVTALFNQARLLEQLHD 540

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
            ++ A +LY+LILFK+ DY DA+LRLAAI+K+RNN+R+SIEL+G++LKV EKCP  L+MLG
Sbjct: 541  TEKACLLYKLILFKFPDYGDAYLRLAAISKSRNNIRMSIELIGDALKVNEKCPEALSMLG 600

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELK  +W KAK TF+AA EA +  D Y T+ LGNWNYFAA+  EK K   LEA HL+K
Sbjct: 601  SLELKGDDWFKAKETFKAAREATDGRDSYATLSLGNWNYFAAVRNEK-KEPKLEAAHLEK 659

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LY  VL Q P +LYAANGA +V AEKG FDV+KDIFTQV EAA+G+   QMPDVW+N
Sbjct: 660  ARELYGKVLMQRPGSLYAANGAGVVLAEKGHFDVSKDIFTQVQEAATGSIFVQMPDVWVN 719

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQG F LAVKMYQNCLRKF+ N D+QVLLYLARTHYEAEQWQDCK+TLLRAIHL
Sbjct: 720  LAHVYFAQGQFALAVKMYQNCLRKFYHNTDTQVLLYLARTHYEAEQWQDCKKTLLRAIHL 779

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
             PSNY LRF+ GV +QKFSASTL KTK+TA+EVR A+ E++ A+RVFSQLS     H HG
Sbjct: 780  QPSNYMLRFDAGVALQKFSASTLQKTKRTADEVRLAVAELKNALRVFSQLSVATGHHCHG 839

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THV YCK +LD AK+H E AEREEQ  +Q+LE+ARQ+ L              
Sbjct: 840  FDEKKIETHVGYCKHLLDAAKVHCEAAEREEQQIRQKLEVARQLVLAEEARRKAEEQRKF 899

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHSKRKDRTHS-DDEEGEHSEXXXXXXXX 3042
                         V   EE F+RVKE W+    SKRKDR H+ D+EEG H E        
Sbjct: 900  QMERRKQEDELKQVMQQEEQFERVKELWR----SKRKDRPHAEDEEEGGHGEKKKKKEKK 955

Query: 3043 XXXXDKNTKPRYESDEGEVD----RGYEEDRM----DGEEPNNIALDPVAAAGLEDSDED 3198
                DK+ K   E +E E D       EED      + EE    A D +AAAGLED D++
Sbjct: 956  RRKKDKHNKSLAEIEEQEADMEEPEEMEEDDANMLNEKEEDGENAQDALAAAGLEDFDDE 1015

Query: 3199 P-----GAQSGANRRRWALSESDDDERVDK 3273
                   + S  +RR+ A SESD+DE +D+
Sbjct: 1016 EEMMQNASASKPSRRKPAWSESDNDEPIDR 1045


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
            gi|223544778|gb|EEF46294.1| tpr repeat nuclear
            phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 1346 bits (3483), Expect = 0.0
 Identities = 688/1054 (65%), Positives = 815/1054 (77%), Gaps = 24/1054 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS+DIDEYYADVKY+R+AILNALGAY+SYLGKIETK REK+E+F++AT++YNKA
Sbjct: 61   QILEEGSSNDIDEYYADVKYDRIAILNALGAYYSYLGKIETKQREKEEYFIQATRYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+I+ A  AFKIVLEGDRDNVSALLGQACV ++R  Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEIEQAYNAFKIVLEGDRDNVSALLGQACVEYNRSHYNE 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL+ YKRAL+VHP CP +                           LDPENVEALV+L I+
Sbjct: 181  SLKSYKRALQVHPECPGS---------------------------LDPENVEALVSLAIL 213

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQTN+  GIRRGME MQ AFEIYPY AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 214  DLQTNEVNGIRRGMESMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH 273

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HS+YNLARSYHSKGDY+ A RYY ASVKE +KP EFV PYYGLGQVQLKLG+ ++
Sbjct: 274  GPTKSHSFYNLARSYHSKGDYETASRYYWASVKETNKPSEFVFPYYGLGQVQLKLGEIKN 333

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LK LGH+Y +L QT+KA E L+K TKID RDAQ +LDLGELL
Sbjct: 334  ALSNFEKVLEVYPDNCETLKVLGHIYAQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELL 393

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            ISSDT AALDA KTA  LLKK G +VP+E+LNNIG+++FE+ EL+LA + F++A+GDG W
Sbjct: 394  ISSDTGAALDALKTARSLLKKGGHEVPVEVLNNIGVIYFEREELELALETFKEAVGDGIW 453

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L F+D K K Y +DA A++  YKD+Q FH+LE+DG  +EL  +KV+ +FNL RLLE+MH 
Sbjct: 454  LAFLDGKAKTYTIDAAASILHYKDMQFFHQLEQDGHRVELTWDKVTALFNLARLLEQMHN 513

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
             + A +LY LILFKY DYVDA+LRLAAI+KARNN++LSIELV E+LKV +KCPN L+MLG
Sbjct: 514  IETANVLYVLILFKYPDYVDAYLRLAAISKARNNLQLSIELVNEALKVNDKCPNALSMLG 573

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LELKN +WVKAK TFRAASEA +  D Y  + LGNWNYFAA+  EKR    LEA HL+K
Sbjct: 574  DLELKNDDWVKAKETFRAASEATDGKDSYAILSLGNWNYFAAIRNEKRN-PKLEATHLEK 632

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            A +LYT VL Q+ ANLYAANGA +V AEKG FDV+KD+F +V EAASG+   QMPDVWIN
Sbjct: 633  AKELYTRVLVQHTANLYAANGAGVVLAEKGHFDVSKDLFMEVQEAASGSIFVQMPDVWIN 692

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF LAVKMYQNCLRKF+++ DSQ+LLYLARTHYEAEQWQ+CK+TLLRAIHL
Sbjct: 693  LAHVYFAQGNFALAVKMYQNCLRKFYYSTDSQILLYLARTHYEAEQWQECKKTLLRAIHL 752

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL KTK+T +EVRS + E++ AVR+FSQLS     H HG
Sbjct: 753  APSNYILRFDAGVAMQKFSASTLQKTKRTVDEVRSTVDELENAVRLFSQLSASSNLHFHG 812

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKI+THVEYCK +L+ AK+HRE AEREEQ N+QR E+ARQ+ L              
Sbjct: 813  FDEKKINTHVEYCKHLLEAAKVHREAAEREEQQNRQRQEVARQMALAEEARRKAEEQKKF 872

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWK-STSHSKRKDRTHSDDEEGEHSEXXXXXXXX 3042
                         V+  EE+F+RVKEQWK ST  SKR+DR+  D+EEG HSE        
Sbjct: 873  LLEKRKQEDELKRVRQQEEHFERVKEQWKTSTPGSKRRDRSEVDEEEGGHSEKRRRKGGK 932

Query: 3043 XXXXDKNTKPRYESDEGEVDR----------------GYEEDRMDG--EEPNNIALDPVA 3168
                +K++K RYE +EGE D                 G  ++R+D   E+    A D +A
Sbjct: 933  RRKKEKSSKSRYEIEEGEADMMDDREELEDEDANVNYGEHKNRLDNQDEDAEENAQDLLA 992

Query: 3169 AAGLEDSDEDPGAQSGANRRRWALSESDDDERVD 3270
            AAGLEDSD +  A S   RRR ALSESDDDE +D
Sbjct: 993  AAGLEDSDAEDAAPSSTARRRRALSESDDDEVLD 1026


>ref|XP_006296878.1| hypothetical protein CARUB_v10012866mg [Capsella rubella]
            gi|482565587|gb|EOA29776.1| hypothetical protein
            CARUB_v10012866mg [Capsella rubella]
          Length = 1090

 Score = 1323 bits (3425), Expect = 0.0
 Identities = 680/1055 (64%), Positives = 818/1055 (77%), Gaps = 29/1055 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSSSDIDEYYADVKYER+AILNALGAY+SYLGK ETK REK+E F+ ATQ+YNKA
Sbjct: 61   QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKNREKEEQFIMATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLLAKG+ID AL AFKIVL+   DNV ALLGQA V F+RGR+ E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSE 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL+LYKRAL+V P CPAAVRLGI LCRY+L Q +KARQAF+RVLQLDP+NVEALVALGIM
Sbjct: 181  SLQLYKRALQVFPGCPAAVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ ND+ G+R+GMERMQ AFEIYPY A +LNYLANHFFFTGQHFLVEQLTETALA + H
Sbjct: 241  DLQANDSIGMRKGMERMQQAFEIYPYCASALNYLANHFFFTGQHFLVEQLTETALAVTTH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEV-SKPQEFVLPYYGLGQVQLKLGDYR 1257
            GPTK+HS+YNLARSYHSKGDY+KAG YYMA++KE  +KPQEFV PY+GLGQVQLKLG+++
Sbjct: 301  GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETDNKPQEFVFPYFGLGQVQLKLGEFK 360

Query: 1258 SALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGEL 1437
             +++NFEKVLEVYP+NCE+LKALGHLY +L +TDKA+E ++K TK+D RDAQ Y+ LGEL
Sbjct: 361  GSVVNFEKVLEVYPDNCETLKALGHLYTQLGKTDKALEYMRKATKLDPRDAQAYVGLGEL 420

Query: 1438 LISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGA 1617
            LI SDT AALDA+K A  L+KK G+DVPIE+LN+IG LHFE+ E + A   F++ALGDG 
Sbjct: 421  LIPSDTGAALDAFKMARTLMKKGGQDVPIEVLNDIGALHFEREEFESALDNFKEALGDGI 480

Query: 1618 WLLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMH 1797
            W+ FIDEKEK        ++  YKD  IFH+L E G S+++P NKV+ +FNL RLLE++H
Sbjct: 481  WISFIDEKEK--LEQTGVSVLGYKDTGIFHKLIESGHSVDVPWNKVTTLFNLARLLEQLH 538

Query: 1798 KSQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTML 1977
            K++ A  LYRLILFKY  Y+DA+LRLAA AKA+NN+ L+IELV E+LKV +K PN L++L
Sbjct: 539  KTEAATFLYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALSLL 598

Query: 1978 GGLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLD 2157
            G LELKN +WVKAK TFRAAS+A +  D Y  + LGNWNYFAA+  EKR    LEA HL+
Sbjct: 599  GELELKNDDWVKAKETFRAASDATDGKDSYAILSLGNWNYFAAMRNEKRN-PKLEATHLE 657

Query: 2158 KAGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWI 2337
            KA +LYT VL ++ +N+YAANG+ +V AEKGQFD+AKD+FTQV EAASG+   QMPDVW+
Sbjct: 658  KAKELYTKVLTKHNSNMYAANGSGIVLAEKGQFDIAKDVFTQVQEAASGSVFLQMPDVWV 717

Query: 2338 NVAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIH 2517
            N+AHVYFAQGNF LAVKMYQNCLRKF +N DSQ+LLYLARTHYEAEQWQ+CK+TLLRAIH
Sbjct: 718  NLAHVYFAQGNFALAVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQNCKKTLLRAIH 777

Query: 2518 LAPSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLH 2682
            L PSNY  RF++G VMQK S+STL K K+TA+EVRS + E + AVRVF+QLS     H+H
Sbjct: 778  LTPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRSTVAEAENAVRVFTQLSAASDLHVH 837

Query: 2683 GFDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXX 2862
            GFD+KKI THV+YC  +L+ +K+HRE AEREE  N+QRLE+ARQ  L             
Sbjct: 838  GFDDKKIQTHVQYCSHLLEASKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEQRK 897

Query: 2863 XXXXXXXXXXXXXXVKALEENFQRVKEQWKSTS--HSKRKDRTHSDDEEGEHSEXXXXXX 3036
                          +K  EE FQR+KEQWK+++    KRKDR   DD EG+ SE      
Sbjct: 898  YQLEKRKQEDELRRLKQEEEKFQRIKEQWKTSTPGSHKRKDRVEDDDGEGKPSERRRKKG 957

Query: 3037 XXXXXXDKNTKPR-YESDEGEV------------------DRGYEEDRMDGEEP-NNIAL 3156
                  DK+++ R YE DE EV                  +R  E    + EEP ++ A 
Sbjct: 958  GKRRKKDKSSRARHYEDDEEEVVTMDDHNEVEDEDGNTNYNREDELTNQETEEPVDDDAH 1017

Query: 3157 DPVAAAGLEDSD-EDPGAQSGANRRRWALSESDDD 3258
            D +AAAGLED D +D    +   RRR ALS SD++
Sbjct: 1018 DLLAAAGLEDPDVDDDEVPASVVRRRRALSSSDEE 1052


>ref|XP_004161106.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
            CTR9 homolog [Cucumis sativus]
          Length = 1050

 Score = 1314 bits (3400), Expect = 0.0
 Identities = 674/1055 (63%), Positives = 808/1055 (76%), Gaps = 25/1055 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M CVYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKLEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSS +IDEYYADV+YER+AILNALGAY+SYLGKIETK REK+EHF+ ATQ+YNKA
Sbjct: 61   QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEPSTWVGKGQLLL KG+++ A AAFKIVL+GDRDNV ALLGQACV F+RG Y E
Sbjct: 121  SRIDMHEPSTWVGKGQLLLTKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGHYSE 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SLELYKRAL+V+P+CPAA                           LDPENVEALV L I+
Sbjct: 181  SLELYKRALQVYPDCPAA---------------------------LDPENVEALVGLAII 213

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +L TN+A  IR GME+MQ AFEIYP+ AM+LNYLANHFFFTGQHFLVEQLTETALA +NH
Sbjct: 214  DLNTNEAGRIRNGMEKMQRAFEIYPFCAMALNYLANHFFFTGQHFLVEQLTETALAITNH 273

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEVSKPQEFVLPYYGLGQVQLKLGDYRS 1260
            GPTK+HS+YNLARSYHSKGDY+KAG YYMAS KE +KP+EFV PYYGLGQVQLK+GD RS
Sbjct: 274  GPTKSHSFYNLARSYHSKGDYEKAGLYYMASAKEANKPREFVFPYYGLGQVQLKMGDLRS 333

Query: 1261 ALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGELL 1440
            AL NFEKVLEVYP+NCE+LK LGH+YV+L Q +KA E L+K TKID RDAQ +LDLGELL
Sbjct: 334  ALSNFEKVLEVYPDNCETLKVLGHIYVQLGQAEKAQESLRKATKIDPRDAQAFLDLGELL 393

Query: 1441 ISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGAW 1620
            IS+D +AALDA+KTA  LLKK G++VPIE+LNN+G+LHFE+ E +LAE+ F++ALGDG W
Sbjct: 394  ISTDESAALDAFKTASILLKKGGQEVPIEVLNNLGVLHFEREEFELAERIFKEALGDGIW 453

Query: 1621 LLFIDEKEKKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEEMHK 1800
            L FID K +  A++A A++ QYKDV++F++LE +G ++ LP  KV+ +FNL RLLE++H+
Sbjct: 454  LDFIDGKVRCPAIEASASVLQYKDVELFYQLEREGRAIVLPWKKVTSLFNLARLLEQLHR 513

Query: 1801 SQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLTMLG 1980
             + + +LYRLILFKY DYVDA+LRLA+IAKARN V+LSIELV ++LKV +KC N L+MLG
Sbjct: 514  IEVSSVLYRLILFKYPDYVDAYLRLASIAKARNYVQLSIELVNDALKVNDKCSNALSMLG 573

Query: 1981 GLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIHLDK 2160
             LE KN +WV+AK TFRAA EA +  D Y T+ LGNWNYFAAL  EKR    LEA HL+K
Sbjct: 574  ELEXKNDDWVRAKETFRAAGEATDGKDSYATLSLGNWNYFAALRNEKRN-PKLEATHLEK 632

Query: 2161 AGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDVWIN 2340
            + +LYT VL Q+PANLYAANGA ++ AEKGQFDV+KDIFTQV EAASGN   QMPDVWIN
Sbjct: 633  SKELYTRVLVQHPANLYAANGAGVILAEKGQFDVSKDIFTQVQEAASGNIFVQMPDVWIN 692

Query: 2341 VAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRAIHL 2520
            +AHVYFAQGNF+LAVKMYQNCLRKF++N D Q+LLYLART+YEAEQWQDCK+TLLRAIHL
Sbjct: 693  LAHVYFAQGNFSLAVKMYQNCLRKFYYNTDYQILLYLARTYYEAEQWQDCKKTLLRAIHL 752

Query: 2521 APSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----HLHG 2685
            APSNY LRF+ GV MQKFSASTL KTK+TA+EVRS + E++ AVRVFSQLS     H HG
Sbjct: 753  APSNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVAELENAVRVFSQLSAASNLHFHG 812

Query: 2686 FDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXXXXX 2865
            FDEKKIDTHV YCK +L+ A +H + AE EEQ  +QR ELARQV L              
Sbjct: 813  FDEKKIDTHVGYCKHLLEAAGVHLKAAEHEEQQIRQRQELARQVALAEDARRKADEQRKF 872

Query: 2866 XXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHSKRKDRTHSDDEEGEHSEXXXXXXXXX 3045
                         +   E++F+RVKEQWKS + +KR++R+  DD+E  +SE         
Sbjct: 873  QLERRKLEDEEKRMMQQEQHFKRVKEQWKSITPAKRRERSEIDDDEAGNSEKRRRKGGKR 932

Query: 3046 XXXDKNTKPRYESDEGEVDR-------------GYEEDRM----DGEEPNNIALDPVAAA 3174
               D+  K  YE++E + D               Y E R      G++      D +A A
Sbjct: 933  RKKDRKGKSHYETEEADNDMMDDQELYNEDNNISYRESRSQVNDQGDDFEGNDQDALAEA 992

Query: 3175 GLEDSDEDPGA---QSGANRRRWALSESDDDERVD 3270
            GLEDSD +  A    S A RRR   S+S++DE +D
Sbjct: 993  GLEDSDAEDEAGAPSSNAARRRATWSDSEEDEPID 1027


>ref|XP_006396118.1| hypothetical protein EUTSA_v10002377mg [Eutrema salsugineum]
            gi|557096389|gb|ESQ36897.1| hypothetical protein
            EUTSA_v10002377mg [Eutrema salsugineum]
          Length = 1097

 Score = 1309 bits (3388), Expect = 0.0
 Identities = 672/1060 (63%), Positives = 811/1060 (76%), Gaps = 31/1060 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 7    MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 66

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSSSDIDEYYADVKYER+AILNALGAY+SYLGK ETK +EK+E+F+ ATQ+YNKA
Sbjct: 67   QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKHKEKEEYFILATQYYNKA 126

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEP+TWVGKGQLLLAKG+ID AL AF IVL    DNV ALLGQA V F RGR+ E
Sbjct: 127  SRIDMHEPTTWVGKGQLLLAKGEIDNALQAFTIVLGNAPDNVPALLGQASVEFSRGRFSE 186

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL+LYKRAL+V+P CPAAVRLGI +CRY+L Q +KARQAF+RVLQLDP+NVEALVALGIM
Sbjct: 187  SLQLYKRALQVYPGCPAAVRLGIGVCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM 246

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ ND+ G+R+GMERMQ AFEIYPY A +LNYLANHFFFTGQHFLVEQLTETALA S H
Sbjct: 247  DLQANDSVGMRKGMERMQQAFEIYPYCAAALNYLANHFFFTGQHFLVEQLTETALAVSTH 306

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEV-SKPQEFVLPYYGLGQVQLKLGDYR 1257
            GPTK+HS+YNLARSYHSKGDY+KAG YYMA++KE  + PQEFV PY+GLGQVQLKLG+ +
Sbjct: 307  GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNNPQEFVFPYFGLGQVQLKLGELK 366

Query: 1258 SALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGEL 1437
             ++ NFE+VLEVYP+NCE+LKALGHLY +L +TDKA+E ++K TK+D RDAQ ++ LGEL
Sbjct: 367  GSVSNFERVLEVYPDNCETLKALGHLYTQLGKTDKALEYMRKATKLDPRDAQAFIGLGEL 426

Query: 1438 LISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGA 1617
            LISSDT AALDA+K A  L+KK G++VPIE+LN+IG LHFEK + + A   F++ALGDG 
Sbjct: 427  LISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEKEDFESALDNFQEALGDGI 486

Query: 1618 WLLFIDEKE--KKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEE 1791
            W+ F D+KE  K+  V        YKD  IFHRL E G S+++P NKV+ +FNL RLLE+
Sbjct: 487  WMSFFDDKENLKQTGVSVLG----YKDAGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQ 542

Query: 1792 MHKSQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLT 1971
            +HK++ A  LYRLILFKY  Y+DA+LRLAA AKA+NN+ L+IELV E+LKV +K PN L+
Sbjct: 543  LHKTETATFLYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALS 602

Query: 1972 MLGGLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIH 2151
            +LG LELKN +WVKAK TFRAA++A +  D Y  + LGNWNYFAA+  EKR    LEA H
Sbjct: 603  LLGELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRN-PKLEATH 661

Query: 2152 LDKAGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDV 2331
            L+KA +LYT VL Q+ +NLYAANG+ ++ AEKGQFD+AKD+FTQV EAASG+   QMPDV
Sbjct: 662  LEKAKELYTKVLTQHNSNLYAANGSGIILAEKGQFDIAKDLFTQVQEAASGSVFLQMPDV 721

Query: 2332 WINVAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRA 2511
            W+N+AHVYFAQGNF LAVKMYQNCLRKF +N DSQ+LLYLARTHYEAE WQ+CK+TLLRA
Sbjct: 722  WVNLAHVYFAQGNFALAVKMYQNCLRKFFYNTDSQILLYLARTHYEAEHWQECKKTLLRA 781

Query: 2512 IHLAPSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----H 2676
            IHL PSNY  RF++G VMQK S+STL K K+TA+EVR  + E + AVRVFSQLS     H
Sbjct: 782  IHLTPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRQTVTEAENAVRVFSQLSAASDLH 841

Query: 2677 LHGFDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXX 2856
            +HGFD KKI THV+YC  +L+ AK+HRE AEREE  N+QRLE+ARQ  L           
Sbjct: 842  VHGFDGKKIQTHVQYCTHLLEGAKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEH 901

Query: 2857 XXXXXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHS--KRKDRTHSDDEEGEHSEXXXX 3030
                            +K  EE  QR+KEQWKS +H   KRKDR   ++ +G  SE    
Sbjct: 902  RKHQLEKRKQEDELRRLKQEEEKIQRIKEQWKSNTHGSHKRKDRAEDEEGDGRPSERKRK 961

Query: 3031 XXXXXXXXDKNTKPR-YESDEGEV----------------DRGYEEDRMDGEEP-NNIAL 3156
                    DK+++ R YE DE EV                +   EE+  + EEP ++ A 
Sbjct: 962  KGGKRKRKDKSSRARHYEDDEEEVGTMDDHNEVEDGDANTNYNREEENQEAEEPVDDDAH 1021

Query: 3157 DPVAAAGLEDSDEDPG---AQSGANRRRWALSESDDDERV 3267
            D +AAAGLED D D       +   RRR ALS SD++ ++
Sbjct: 1022 DLLAAAGLEDPDADDDEVQVPASVARRRRALSSSDEEGKM 1061


>ref|XP_006396117.1| hypothetical protein EUTSA_v10002377mg [Eutrema salsugineum]
            gi|557096388|gb|ESQ36896.1| hypothetical protein
            EUTSA_v10002377mg [Eutrema salsugineum]
          Length = 1091

 Score = 1309 bits (3388), Expect = 0.0
 Identities = 672/1060 (63%), Positives = 811/1060 (76%), Gaps = 31/1060 (2%)
 Frame = +1

Query: 181  MGCVYIPVQNSEEEVRVNLDQLPEDAGDILDILKAEQAPLDLWLVIAREYFKQGKVKEFQ 360
            M  VYIPVQNSEEEVRV LDQLP DA DILDILKAEQAPLDLWL+IAREYFKQGK+++F+
Sbjct: 1    MASVYIPVQNSEEEVRVVLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIEQFR 60

Query: 361  QILGEGSSSDIDEYYADVKYERVAILNALGAYHSYLGKIETKPREKDEHFVEATQFYNKA 540
            QIL EGSSSDIDEYYADVKYER+AILNALGAY+SYLGK ETK +EK+E+F+ ATQ+YNKA
Sbjct: 61   QILEEGSSSDIDEYYADVKYERIAILNALGAYYSYLGKTETKHKEKEEYFILATQYYNKA 120

Query: 541  ARIDVHEPSTWVGKGQLLLAKGDIDPALAAFKIVLEGDRDNVSALLGQACVHFHRGRYLE 720
            +RID+HEP+TWVGKGQLLLAKG+ID AL AF IVL    DNV ALLGQA V F RGR+ E
Sbjct: 121  SRIDMHEPTTWVGKGQLLLAKGEIDNALQAFTIVLGNAPDNVPALLGQASVEFSRGRFSE 180

Query: 721  SLELYKRALRVHPNCPAAVRLGIALCRYRLNQFEKARQAFERVLQLDPENVEALVALGIM 900
            SL+LYKRAL+V+P CPAAVRLGI +CRY+L Q +KARQAF+RVLQLDP+NVEALVALGIM
Sbjct: 181  SLQLYKRALQVYPGCPAAVRLGIGVCRYKLGQLDKARQAFDRVLQLDPDNVEALVALGIM 240

Query: 901  ELQTNDAAGIRRGMERMQYAFEIYPYNAMSLNYLANHFFFTGQHFLVEQLTETALAASNH 1080
            +LQ ND+ G+R+GMERMQ AFEIYPY A +LNYLANHFFFTGQHFLVEQLTETALA S H
Sbjct: 241  DLQANDSVGMRKGMERMQQAFEIYPYCAAALNYLANHFFFTGQHFLVEQLTETALAVSTH 300

Query: 1081 GPTKAHSYYNLARSYHSKGDYDKAGRYYMASVKEV-SKPQEFVLPYYGLGQVQLKLGDYR 1257
            GPTK+HS+YNLARSYHSKGDY+KAG YYMA++KE  + PQEFV PY+GLGQVQLKLG+ +
Sbjct: 301  GPTKSHSFYNLARSYHSKGDYEKAGMYYMAAIKETNNNPQEFVFPYFGLGQVQLKLGELK 360

Query: 1258 SALMNFEKVLEVYPENCESLKALGHLYVRLQQTDKAIEVLKKVTKIDSRDAQPYLDLGEL 1437
             ++ NFE+VLEVYP+NCE+LKALGHLY +L +TDKA+E ++K TK+D RDAQ ++ LGEL
Sbjct: 361  GSVSNFERVLEVYPDNCETLKALGHLYTQLGKTDKALEYMRKATKLDPRDAQAFIGLGEL 420

Query: 1438 LISSDTAAALDAYKTACGLLKKAGEDVPIELLNNIGILHFEKGELQLAEQAFRDALGDGA 1617
            LISSDT AALDA+K A  L+KK G++VPIE+LN+IG LHFEK + + A   F++ALGDG 
Sbjct: 421  LISSDTGAALDAFKMARTLMKKGGQEVPIEVLNDIGALHFEKEDFESALDNFQEALGDGI 480

Query: 1618 WLLFIDEKE--KKYAVDACAALDQYKDVQIFHRLEEDGISMELPSNKVSIVFNLGRLLEE 1791
            W+ F D+KE  K+  V        YKD  IFHRL E G S+++P NKV+ +FNL RLLE+
Sbjct: 481  WMSFFDDKENLKQTGVSVLG----YKDAGIFHRLIESGHSVDVPWNKVTTLFNLARLLEQ 536

Query: 1792 MHKSQNAIMLYRLILFKYADYVDAFLRLAAIAKARNNVRLSIELVGESLKVKEKCPNGLT 1971
            +HK++ A  LYRLILFKY  Y+DA+LRLAA AKA+NN+ L+IELV E+LKV +K PN L+
Sbjct: 537  LHKTETATFLYRLILFKYPGYIDAYLRLAASAKAQNNLPLAIELVNEALKVDDKNPNALS 596

Query: 1972 MLGGLELKNSEWVKAKATFRAASEAAEKNDPYVTICLGNWNYFAALEGEKRKASNLEAIH 2151
            +LG LELKN +WVKAK TFRAA++A +  D Y  + LGNWNYFAA+  EKR    LEA H
Sbjct: 597  LLGELELKNDDWVKAKETFRAANDATDGKDSYAILSLGNWNYFAAMRNEKRN-PKLEATH 655

Query: 2152 LDKAGDLYTTVLKQNPANLYAANGAALVRAEKGQFDVAKDIFTQVLEAASGNTLAQMPDV 2331
            L+KA +LYT VL Q+ +NLYAANG+ ++ AEKGQFD+AKD+FTQV EAASG+   QMPDV
Sbjct: 656  LEKAKELYTKVLTQHNSNLYAANGSGIILAEKGQFDIAKDLFTQVQEAASGSVFLQMPDV 715

Query: 2332 WINVAHVYFAQGNFTLAVKMYQNCLRKFHFNADSQVLLYLARTHYEAEQWQDCKRTLLRA 2511
            W+N+AHVYFAQGNF LAVKMYQNCLRKF +N DSQ+LLYLARTHYEAE WQ+CK+TLLRA
Sbjct: 716  WVNLAHVYFAQGNFALAVKMYQNCLRKFFYNTDSQILLYLARTHYEAEHWQECKKTLLRA 775

Query: 2512 IHLAPSNYALRFNVGVVMQKFSASTLNKTKKTAEEVRSAILEVQTAVRVFSQLS-----H 2676
            IHL PSNY  RF++G VMQK S+STL K K+TA+EVR  + E + AVRVFSQLS     H
Sbjct: 776  IHLTPSNYTFRFDLGAVMQKSSSSTLQKKKRTADEVRQTVTEAENAVRVFSQLSAASDLH 835

Query: 2677 LHGFDEKKIDTHVEYCKDVLDKAKIHREVAEREEQANKQRLELARQVTLXXXXXXXXXXX 2856
            +HGFD KKI THV+YC  +L+ AK+HRE AEREE  N+QRLE+ARQ  L           
Sbjct: 836  VHGFDGKKIQTHVQYCTHLLEGAKVHREAAEREELQNRQRLEVARQAALAEEARRKAEEH 895

Query: 2857 XXXXXXXXXXXXXXXXVKALEENFQRVKEQWKSTSHS--KRKDRTHSDDEEGEHSEXXXX 3030
                            +K  EE  QR+KEQWKS +H   KRKDR   ++ +G  SE    
Sbjct: 896  RKHQLEKRKQEDELRRLKQEEEKIQRIKEQWKSNTHGSHKRKDRAEDEEGDGRPSERKRK 955

Query: 3031 XXXXXXXXDKNTKPR-YESDEGEV----------------DRGYEEDRMDGEEP-NNIAL 3156
                    DK+++ R YE DE EV                +   EE+  + EEP ++ A 
Sbjct: 956  KGGKRKRKDKSSRARHYEDDEEEVGTMDDHNEVEDGDANTNYNREEENQEAEEPVDDDAH 1015

Query: 3157 DPVAAAGLEDSDEDPG---AQSGANRRRWALSESDDDERV 3267
            D +AAAGLED D D       +   RRR ALS SD++ ++
Sbjct: 1016 DLLAAAGLEDPDADDDEVQVPASVARRRRALSSSDEEGKM 1055