BLASTX nr result

ID: Rheum21_contig00006404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006404
         (205 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481681.1| PREDICTED: eukaryotic translation initiation...    80   4e-13
ref|XP_006429957.1| hypothetical protein CICLE_v100110482mg, par...    80   4e-13
gb|AAC83464.1| eIF3c [Arabidopsis thaliana]                            79   5e-13
ref|NP_191174.1| eukaryotic translation initiation factor 3 subu...    79   5e-13
ref|XP_002301950.1| putative translation initiation family prote...    79   5e-13
ref|XP_006358488.1| PREDICTED: eukaryotic translation initiation...    79   6e-13
ref|XP_006290583.1| hypothetical protein CARUB_v10016672mg [Caps...    79   6e-13
ref|XP_004231313.1| PREDICTED: eukaryotic translation initiation...    79   6e-13
ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arab...    79   6e-13
ref|XP_006403017.1| hypothetical protein EUTSA_v10005781mg [Eutr...    79   8e-13
ref|XP_004231314.1| PREDICTED: eukaryotic translation initiation...    79   8e-13
ref|XP_002876464.1| predicted protein [Arabidopsis lyrata subsp....    79   8e-13
gb|EPS62239.1| hypothetical protein M569_12550, partial [Genlise...    78   1e-12
ref|XP_006290581.1| hypothetical protein CARUB_v10016670mg [Caps...    78   1e-12
ref|XP_006350770.1| PREDICTED: eukaryotic translation initiation...    78   1e-12
emb|CBI29961.3| unnamed protein product [Vitis vinifera]               78   1e-12
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...    78   1e-12
ref|XP_002306956.1| putative translation initiation family prote...    78   1e-12
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]    78   1e-12
ref|XP_006402783.1| hypothetical protein EUTSA_v10005778mg [Eutr...    77   2e-12

>ref|XP_006481681.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Citrus sinensis]
          Length = 914

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/45 (75%), Positives = 44/45 (97%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CI+FH+V+H+RLQALAFQLTE+LS LAE+NERAME++
Sbjct: 772 ASWDQPTRCIIFHDVEHSRLQALAFQLTEKLSILAESNERAMESR 816


>ref|XP_006429957.1| hypothetical protein CICLE_v100110482mg, partial [Citrus
           clementina] gi|567874737|ref|XP_006429958.1|
           hypothetical protein CICLE_v100110482mg, partial [Citrus
           clementina] gi|557532014|gb|ESR43197.1| hypothetical
           protein CICLE_v100110482mg, partial [Citrus clementina]
           gi|557532015|gb|ESR43198.1| hypothetical protein
           CICLE_v100110482mg, partial [Citrus clementina]
          Length = 308

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 34/45 (75%), Positives = 44/45 (97%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CI+FH+V+H+RLQALAFQLTE+LS LAE+NERAME++
Sbjct: 167 ASWDQPTRCIIFHDVEHSRLQALAFQLTEKLSILAESNERAMESR 211


>gb|AAC83464.1| eIF3c [Arabidopsis thaliana]
          Length = 900

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFHEV H+RLQ+LAFQLTE+LS LAE+NERAME++
Sbjct: 760 ASWDQPTRCIVFHEVQHSRLQSLAFQLTEKLSILAESNERAMESR 804


>ref|NP_191174.1| eukaryotic translation initiation factor 3 subunit C [Arabidopsis
           thaliana] gi|334186011|ref|NP_001190102.1| eukaryotic
           translation initiation factor 3 subunit C [Arabidopsis
           thaliana] gi|23503063|sp|O49160.2|EIF3C_ARATH RecName:
           Full=Eukaryotic translation initiation factor 3 subunit
           C; Short=eIF3c; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 8; AltName: Full=eIF3 p110;
           AltName: Full=p105 gi|7572913|emb|CAB87414.1| PROBABLE
           EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 8
           [Arabidopsis thaliana] gi|17381100|gb|AAL36362.1|
           putative eukaryotic translation initiation factor 3
           subunit 8 [Arabidopsis thaliana]
           gi|25054977|gb|AAN71960.1| putative eukaryotic
           translation initiation factor 3 subunit 8 [Arabidopsis
           thaliana] gi|332645965|gb|AEE79486.1| eukaryotic
           translation initiation factor 3 subunit C [Arabidopsis
           thaliana] gi|332645966|gb|AEE79487.1| eukaryotic
           translation initiation factor 3 subunit C [Arabidopsis
           thaliana]
          Length = 900

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFHEV H+RLQ+LAFQLTE+LS LAE+NERAME++
Sbjct: 760 ASWDQPTRCIVFHEVQHSRLQSLAFQLTEKLSILAESNERAMESR 804


>ref|XP_002301950.1| putative translation initiation family protein [Populus
           trichocarpa] gi|222843676|gb|EEE81223.1| putative
           translation initiation family protein [Populus
           trichocarpa]
          Length = 910

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/45 (80%), Positives = 42/45 (93%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFH+V HTRLQALAFQLTE+LS LAE+NERA EA+
Sbjct: 767 ASWDQPTQCIVFHDVQHTRLQALAFQLTEKLSILAESNERATEAR 811


>ref|XP_006358488.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Solanum tuberosum]
          Length = 922

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQPS+C+VFH+V+HTRLQALAFQLTE+LS LAE+NERA E++
Sbjct: 775 ASWDQPSRCMVFHDVEHTRLQALAFQLTEKLSVLAESNERATESR 819


>ref|XP_006290583.1| hypothetical protein CARUB_v10016672mg [Capsella rubella]
           gi|482559290|gb|EOA23481.1| hypothetical protein
           CARUB_v10016672mg [Capsella rubella]
          Length = 893

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFHEV H+RLQ+LAFQLTE+LS LAE+NERAME++
Sbjct: 756 ASWDQPTQCIVFHEVQHSRLQSLAFQLTEKLSILAESNERAMESR 800


>ref|XP_004231313.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Solanum lycopersicum]
          Length = 697

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQPS+C+VFH+V+HTRLQALAFQLTE+LS LAE+NERA E++
Sbjct: 552 ASWDQPSRCMVFHDVEHTRLQALAFQLTEKLSVLAESNERATESR 596


>ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arabidopsis lyrata subsp.
           lyrata] gi|297323908|gb|EFH54329.1| hypothetical protein
           ARALYDRAFT_486056 [Arabidopsis lyrata subsp. lyrata]
          Length = 888

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFHEV H+RLQ+LAFQLTE+LS LAE+NERAME++
Sbjct: 748 ASWDQPTQCIVFHEVQHSRLQSLAFQLTEKLSILAESNERAMESR 792


>ref|XP_006403017.1| hypothetical protein EUTSA_v10005781mg [Eutrema salsugineum]
           gi|557104116|gb|ESQ44470.1| hypothetical protein
           EUTSA_v10005781mg [Eutrema salsugineum]
          Length = 894

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFHEV H+RLQ+LAFQLTE+LS LAE+NERAME++
Sbjct: 755 ASWDQPTQCIVFHEVQHSRLQSLAFQLTEKLSVLAESNERAMESR 799


>ref|XP_004231314.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Solanum lycopersicum]
          Length = 669

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQPS+C+VFH+V+HTRLQALAFQLTE+LS LAE+NERA E++
Sbjct: 522 ASWDQPSQCMVFHDVEHTRLQALAFQLTEKLSVLAESNERATESR 566


>ref|XP_002876464.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322302|gb|EFH52723.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 892

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CI+FH+V HTRLQ LAFQLTE+L+ LAE+NERAMEA+
Sbjct: 749 ASWDQPTRCIIFHDVQHTRLQTLAFQLTEKLAVLAESNERAMEAR 793


>gb|EPS62239.1| hypothetical protein M569_12550, partial [Genlisea aurea]
          Length = 905

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP+ C+VFH+V+HTRLQ LAFQL+E+L+ LAETNERAMEA+
Sbjct: 765 ASWDQPTGCVVFHDVEHTRLQGLAFQLSEKLAILAETNERAMEAR 809


>ref|XP_006290581.1| hypothetical protein CARUB_v10016670mg [Capsella rubella]
           gi|565465236|ref|XP_006290582.1| hypothetical protein
           CARUB_v10016670mg [Capsella rubella]
           gi|482559288|gb|EOA23479.1| hypothetical protein
           CARUB_v10016670mg [Capsella rubella]
           gi|482559289|gb|EOA23480.1| hypothetical protein
           CARUB_v10016670mg [Capsella rubella]
          Length = 895

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFH+V H RLQ LAFQLTE+L+ LAE+NERAMEAK
Sbjct: 760 ASWDQPTRCIVFHDVQHNRLQTLAFQLTEKLAVLAESNERAMEAK 804


>ref|XP_006350770.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Solanum tuberosum]
          Length = 914

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 32/45 (71%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           A+WDQP++C+VFH+V+HTRLQ LAFQLTE+L+ L+ETNERAME++
Sbjct: 768 ANWDQPTRCVVFHDVEHTRLQGLAFQLTEKLAILSETNERAMESR 812


>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFH+V+HTRLQAL+FQLT++L+ LAE NERA EAK
Sbjct: 701 ASWDQPTRCIVFHDVEHTRLQALSFQLTDKLTILAENNERAYEAK 745


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Vitis vinifera]
          Length = 946

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFH+V+HTRLQAL+FQLT++L+ LAE NERA EAK
Sbjct: 781 ASWDQPTRCIVFHDVEHTRLQALSFQLTDKLTILAENNERAYEAK 825


>ref|XP_002306956.1| putative translation initiation family protein [Populus
           trichocarpa] gi|222856405|gb|EEE93952.1| putative
           translation initiation family protein [Populus
           trichocarpa]
          Length = 897

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/45 (77%), Positives = 43/45 (95%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFH+++ TRLQALAFQLTE+LS LAE+NERA+EAK
Sbjct: 766 ASWDQPTQCIVFHDLEQTRLQALAFQLTEKLSILAESNERAIEAK 810


>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
          Length = 1047

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 34/45 (75%), Positives = 42/45 (93%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           ASWDQP++CIVFH+V+HTRLQAL+FQLT++L+ LAE NERA EAK
Sbjct: 780 ASWDQPTRCIVFHDVEHTRLQALSFQLTDKLTILAENNERAYEAK 824


>ref|XP_006402783.1| hypothetical protein EUTSA_v10005778mg [Eutrema salsugineum]
           gi|557103882|gb|ESQ44236.1| hypothetical protein
           EUTSA_v10005778mg [Eutrema salsugineum]
          Length = 908

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = -3

Query: 203 ASWDQPSKCIVFHEVDHTRLQALAFQLTERLSFLAETNERAMEAK 69
           A+WDQP++CIVFH+V H RLQ LAFQLTE+L+ LAE+NERAMEAK
Sbjct: 761 ANWDQPTRCIVFHDVQHNRLQTLAFQLTEKLAVLAESNERAMEAK 805


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