BLASTX nr result

ID: Rheum21_contig00006391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006391
         (1215 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65994.1| hypothetical protein [Beta vulgaris subsp. vulga...    74   5e-15

>emb|CCA65994.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 803

 Score = 74.3 bits (181), Expect(2) = 5e-15
 Identities = 33/75 (44%), Positives = 48/75 (64%)
 Frame = +1

Query: 1   NPIDQKKAWDGRHYHAFGQLILLNPWCSNFDPFYEPIYTVDM*IRIPQLPMEYISFDVLS 180
           NP D    W  R +H  G L++L PW  +FDP+ E I  VD+ +RIP+LP E ++FD ++
Sbjct: 390 NPQDLALVWSERPWHIQGDLLVLQPWKPSFDPYLEEIKWVDLWVRIPRLPTELLNFDSIA 449

Query: 181 TIIEMNHLGKLIKLD 225
            ++  N +G LIKLD
Sbjct: 450 NLLASNDIGALIKLD 464



 Score = 34.7 bits (78), Expect(2) = 5e-15
 Identities = 16/71 (22%), Positives = 30/71 (42%)
 Frame = +3

Query: 240 KQRVSYVCLCINVDVVKIKCKTIVIPNEEGLPKIFNIWFEESPEGCGNCGAPEHSFDKSP 419
           + ++ +   CI VD+     +   +     L   + IW+E+   GC  CG   H  +  P
Sbjct: 470 RNKIRFARACIRVDIQGPLLEFAEVSRSGDLRHGYVIWYEDFSAGCSFCGEIAHLIEACP 529

Query: 420 LRNVKPQSLQL 452
           L N   + + +
Sbjct: 530 LLNSPKKEISI 540


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