BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006315
         (2256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe...   507   e-141
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin...   498   e-138
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo...   495   e-137
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin...   493   e-136
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin...   492   e-136
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              491   e-136
ref|XP_002320513.1| RNA recognition motif-containing family prot...   488   e-135
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin...   487   e-134
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   479   e-132
ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containin...   469   e-129
ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citr...   468   e-129
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A...   459   e-126
ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containin...   446   e-122
ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containin...   434   e-118
gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Mo...   431   e-118
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin...   424   e-115
gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-bind...   422   e-115
ref|XP_006297381.1| hypothetical protein CARUB_v10013406mg [Caps...   421   e-115
ref|XP_006293001.1| hypothetical protein CARUB_v10019278mg [Caps...   412   e-112
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   409   e-111

>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
          Length = 565

 Score =  507 bits (1306), Expect = e-141
 Identities = 288/566 (50%), Positives = 354/566 (62%), Gaps = 64/566 (11%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTK+VY RIQK+EPE VSKI+GYLLL+D+GER+MIRLAFSPDN+I S+ NKAKTE
Sbjct: 1    MDFSESTKVVYNRIQKIEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLIQSLINKAKTE 60

Query: 416  LGF--------------------------------------GPTNQPSTNSYWNPQ-PQP 478
            LG                                        PT   + N + +PQ P  
Sbjct: 61   LGLCKLAVSAPISPSQVNQVPVSDPPLQFTPYTPNLTRPISSPTPLGAVNPFRDPQLPGD 120

Query: 479  LTPDHNVAXXXXXXXXXXXXXXXXDEQVEFP---GGNRCHP----------RFSTPGELP 619
              P  NV                   Q++F      N C+           R  +  E P
Sbjct: 121  QQPLQNVEFVPPGYSDSAIEDYRLQNQMQFLPDFSSNYCYHEPALSVRTSRRSPSLPEFP 180

Query: 620  SKVCHYFSKGFCKHGSSCRYLHGNP----------NEGFADDQLFSPRSVEKLEFELTEL 769
             KVCHYF+KGFCKHGS+CRY HG+P          NE   DD + SP S+EKLE E+ EL
Sbjct: 181  LKVCHYFNKGFCKHGSNCRYFHGHPMAESFSHPNLNELSNDDHVVSPGSLEKLEIEIIEL 240

Query: 770  LRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIE 949
            L+SR G P+SIA LPM+YY+K+GRTLQAEGYLTESQRHGKAGYSLTKLL R++  I +++
Sbjct: 241  LKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLLD 300

Query: 950  RAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFG 1129
            R HGQHSVILAED+PKYLEY   ++E G +  G+RQIYLTFPAES FTEQDVS+YF+ +G
Sbjct: 301  RPHGQHSVILAEDIPKYLEYAGEKTEPGGIIAGSRQIYLTFPAESNFTEQDVSNYFNKYG 360

Query: 1130 PVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERKNA 1309
            PVQDVRIPCQQKRMFGFVTF+Y ETVR IL+KGNPHF+CGARVLVKPYREKSRL +RK +
Sbjct: 361  PVQDVRIPCQQKRMFGFVTFVYAETVRHILSKGNPHFVCGARVLVKPYREKSRLVDRKFS 420

Query: 1310 ER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQF-XXXXXXXXXXXXXXSEIQAV 1483
            E+ +HA      F D D     +S  R     R +RKQF               SE+   
Sbjct: 421  EKMQHAMCYNSHFIDADSEF--HSMPRVCENARFLRKQFMEENEQALELERRRLSEMHLA 478

Query: 1484 HKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSSTYN 1663
             KPL+      Y +      E + EQAE+ +++ F +LLDVL + ST + + R  +S YN
Sbjct: 479  AKPLSHHFYYGYPMDEFKHPEAHAEQAEVPSAKEFTYLLDVLNNGSTSEGKIRHRNSNYN 538

Query: 1664 DQESSQGLDLPESPFANSKANSISTV 1741
            DQ+SSQG++LPESPFA+   + ISTV
Sbjct: 539  DQDSSQGINLPESPFASPIVSGISTV 564


>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X3 [Citrus sinensis]
          Length = 579

 Score =  498 bits (1282), Expect = e-138
 Identities = 285/580 (49%), Positives = 362/580 (62%), Gaps = 78/580 (13%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD +ESTK VY RIQKLEPE VSKI+GYLLL+D+GER+MIRLAFSPD++I+S+ N+AK +
Sbjct: 1    MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 416  ---------------------LGFGPTNQPST-------------NSYWNPQPQP----- 478
                                 L F P +  ST             + +W+PQ        
Sbjct: 61   LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120

Query: 479  ------LTPDHNVAXXXXXXXXXXXXXXXXDEQVE--------------FP----GGNRC 586
                  + P ++                  ++Q +              +P    G  R 
Sbjct: 121  VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180

Query: 587  HPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNPN-EGFA------------DDQLFS 727
              R  +  E P KVCHYF+KGFCKHG++CRY HG+P  E F+            +D +FS
Sbjct: 181  SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240

Query: 728  PRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLT 907
            P S+E+LE E+TELL+ R G P+SIA LPM+YY+K+G+TLQAEGYLTESQRHGKAGYSLT
Sbjct: 241  PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300

Query: 908  KLLDRMRPRIHIIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESV 1087
            KLL R++  I +I+R HGQHSVILAED+P YLEY+  +S+ G +  G+RQIYLTFPAES 
Sbjct: 301  KLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIYLTFPAEST 360

Query: 1088 FTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVK 1267
            FTEQDVS+YFS FGPVQDVRIPCQQKRMFGFVTF++ ETV++ILAKGNPHF+CGARVLVK
Sbjct: 361  FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420

Query: 1268 PYREKSRLAERKNAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ-FXXXXXX 1441
            PYREKSRL +RK  E+ +H     L F DGD  + T    R  N +RL+RKQ        
Sbjct: 421  PYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHT--MPRVCNNSRLLRKQLMEEHEQA 478

Query: 1442 XXXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDES 1621
                    SE+Q   KP+       YS+  L  SE   EQ +  ++ERF +LLDVL + S
Sbjct: 479  IELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGS 538

Query: 1622 TGDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTV 1741
            T +++    S+ YNDQ+SSQGL+LPESPFA+   + ISTV
Sbjct: 539  TSEDQVSHISTHYNDQDSSQGLNLPESPFASPIGSGISTV 578


>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 557

 Score =  495 bits (1275), Expect = e-137
 Identities = 290/562 (51%), Positives = 351/562 (62%), Gaps = 59/562 (10%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTKIVY RIQKLEPE VSKI+GYLLL+D+GER+MIRLAFSPDN++HS+  +AKTE
Sbjct: 1    MDFSESTKIVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLMHSLITRAKTE 60

Query: 416  LGFG---PTNQPSTNSYWNPQP--------QPLTP---------DHNVAXXXXXXXXXXX 535
            LG     P   P + S  N  P        Q  TP         DHN             
Sbjct: 61   LGLSSKSPVPAPISPSQVNQIPVLDIPLQFQSYTPVSARPNYYWDHNAEVINQGYVDSTA 120

Query: 536  XXXXXDEQV--------------------------EFPGGNRCHPRFSTPGELPSKVCHY 637
                   Q+                          E   G R   R  +  E P KVCHY
Sbjct: 121  ENFHLQNQLHLLSLEDPLESACSVSSDFSSGYYYPELALGLRASRRSPSLSEFPVKVCHY 180

Query: 638  FSKGFCKHGSSCRYLHGNP----------NEGFADDQLFSPRSVEKLEFELTELLRSRNG 787
            F+KG CKHG++C+Y HG+P          NE   D+Q  SP ++E+LE E+ ELLRSR G
Sbjct: 181  FNKGHCKHGTNCKYFHGHPLPESFPRIVSNEVPNDEQAISPGTLERLEMEIVELLRSRIG 240

Query: 788  APVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQH 967
            +PVSIA LPM+YY+K+GR+LQAEGYLTESQRHGK GYSLTKLL R++  I I++R HGQH
Sbjct: 241  SPVSIASLPMMYYEKYGRSLQAEGYLTESQRHGKTGYSLTKLLARLKHSIRIVDRPHGQH 300

Query: 968  SVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVR 1147
            SVILAED+P+YL+Y   ++E G +  G+RQIYLTFPAES FTEQDVS+YF+ FGPVQDVR
Sbjct: 301  SVILAEDVPRYLDYAGEKNEPGVIVSGSRQIYLTFPAESTFTEQDVSNYFNKFGPVQDVR 360

Query: 1148 IPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERKNAERKHAA 1327
            IPCQQKRMFGFVTF+YPETVR+IL+KGNPHF+CGARVLVKPYREKSRL +RK AE+   A
Sbjct: 361  IPCQQKRMFGFVTFVYPETVRQILSKGNPHFVCGARVLVKPYREKSRLVDRKFAEKMLHA 420

Query: 1328 HLCLQ-FDDGDPNMPTNSATRAINGTRLVRKQ-FXXXXXXXXXXXXXXSEIQAVHKPLAA 1501
              C Q F DGD     +S  R     R +RK                 SE+    KP + 
Sbjct: 421  SCCDQHFMDGDSEF--HSLPRDYGKPRFLRKHLMLDNEEGFKLDRRCFSEMNLTAKPSSH 478

Query: 1502 GHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSST-YNDQESS 1678
                 YS+  L   E   EQAE   +ERF +LLDVL + ST +E+     ST  N+Q+SS
Sbjct: 479  RSYYGYSMDELKLPE---EQAEFPYAERFSYLLDVLNNASTSEEKELVHISTKCNEQDSS 535

Query: 1679 QGLDLPESPFANSKANSISTVT 1744
            QGL+LPESPFA++  + I TVT
Sbjct: 536  QGLNLPESPFASAIGSGILTVT 557


>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X1 [Citrus sinensis]
          Length = 582

 Score =  493 bits (1269), Expect = e-136
 Identities = 285/583 (48%), Positives = 362/583 (62%), Gaps = 81/583 (13%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD +ESTK VY RIQKLEPE VSKI+GYLLL+D+GER+MIRLAFSPD++I+S+ N+AK +
Sbjct: 1    MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 416  ---------------------LGFGPTNQPST-------------NSYWNPQPQP----- 478
                                 L F P +  ST             + +W+PQ        
Sbjct: 61   LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120

Query: 479  ------LTPDHNVAXXXXXXXXXXXXXXXXDEQVE--------------FP----GGNRC 586
                  + P ++                  ++Q +              +P    G  R 
Sbjct: 121  VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180

Query: 587  HPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNPN-EGFA------------DDQLFS 727
              R  +  E P KVCHYF+KGFCKHG++CRY HG+P  E F+            +D +FS
Sbjct: 181  SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240

Query: 728  PRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLT 907
            P S+E+LE E+TELL+ R G P+SIA LPM+YY+K+G+TLQAEGYLTESQRHGKAGYSLT
Sbjct: 241  PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300

Query: 908  KLLDRMRPRIHIIERA---HGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPA 1078
            KLL R++  I +I+R    HGQHSVILAED+P YLEY+  +S+ G +  G+RQIYLTFPA
Sbjct: 301  KLLARLKNSIRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIYLTFPA 360

Query: 1079 ESVFTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARV 1258
            ES FTEQDVS+YFS FGPVQDVRIPCQQKRMFGFVTF++ ETV++ILAKGNPHF+CGARV
Sbjct: 361  ESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 420

Query: 1259 LVKPYREKSRLAERKNAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ-FXXX 1432
            LVKPYREKSRL +RK  E+ +H     L F DGD  + T    R  N +RL+RKQ     
Sbjct: 421  LVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHT--MPRVCNNSRLLRKQLMEEH 478

Query: 1433 XXXXXXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLK 1612
                       SE+Q   KP+       YS+  L  SE   EQ +  ++ERF +LLDVL 
Sbjct: 479  EQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLN 538

Query: 1613 DESTGDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTV 1741
            + ST +++    S+ YNDQ+SSQGL+LPESPFA+   + ISTV
Sbjct: 539  NGSTSEDQVSHISTHYNDQDSSQGLNLPESPFASPIGSGISTV 581


>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X4 [Citrus sinensis]
          Length = 578

 Score =  492 bits (1266), Expect = e-136
 Identities = 284/580 (48%), Positives = 361/580 (62%), Gaps = 78/580 (13%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD +ESTK VY RIQKLEPE VSKI+GYLLL+D+GER+MIRLAFSPD++I+S+ N+AK +
Sbjct: 1    MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 416  ---------------------LGFGPTNQPST-------------NSYWNPQPQP----- 478
                                 L F P +  ST             + +W+PQ        
Sbjct: 61   LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120

Query: 479  ------LTPDHNVAXXXXXXXXXXXXXXXXDEQVE--------------FP----GGNRC 586
                  + P ++                  ++Q +              +P    G  R 
Sbjct: 121  VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180

Query: 587  HPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNPN-EGFA------------DDQLFS 727
              R  +  E P KVCHYF+KGFCKHG++CRY HG+P  E F+            +D +FS
Sbjct: 181  SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240

Query: 728  PRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLT 907
            P S+E+LE E+TELL+ R G P+SIA LPM+YY+K+G+TLQAEGYLTESQRHGKAGYSLT
Sbjct: 241  PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300

Query: 908  KLLDRMRPRIHIIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESV 1087
            KLL R++  I +I+R HGQHSVILAED+P YLEY+  +S+ G +  G+RQIYLTFPAES 
Sbjct: 301  KLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIYLTFPAEST 360

Query: 1088 FTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVK 1267
            FTEQDVS+YFS FGPVQDVRIPCQQKRMFGFVTF++ ETV++ILAKGNPHF+CGARVLVK
Sbjct: 361  FTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVK 420

Query: 1268 PYREKSRLAERKNAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ-FXXXXXX 1441
            PYREKSRL +RK  E+ +H     L F DGD  + T    R  N +RL+RKQ        
Sbjct: 421  PYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHT--MPRVCNNSRLLRKQLMEEHEQA 478

Query: 1442 XXXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDES 1621
                    SE+Q   KP+       YS+  L  SE   EQ +  ++ERF +LLDVL + S
Sbjct: 479  IELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGS 538

Query: 1622 TGDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTV 1741
            T +++    S+ YNDQ+ SQGL+LPESPFA+   + ISTV
Sbjct: 539  TSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGSGISTV 577


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  491 bits (1265), Expect = e-136
 Identities = 276/521 (52%), Positives = 338/521 (64%), Gaps = 18/521 (3%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTK+VY RIQKLEPE VSKI+GYLLL+D+GER+MIR AF+ DN I  + NKAK E
Sbjct: 14   MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 73

Query: 416  LGFGP---TNQPSTNSYWNPQPQPLTPDHNVAXXXXXXXXXXXXXXXXDEQVEFPGGNRC 586
            LG       + P +    NP P  ++  H +A                    E     R 
Sbjct: 74   LGLSSKPAVSSPISPPQVNPSPS-MSQIHFLAMEDQLENSVGSEFSGSYYYAEQALNTRI 132

Query: 587  HPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNP-------------NEGFADDQLFS 727
              R  +  E P KVCHYF+KGFCKHG+SCRY HG+P             NE   DD +F 
Sbjct: 133  SRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFP 192

Query: 728  PRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLT 907
            P S+EKLE ELTELL+SR G PVSIA LPM+YY+K+GRTLQAEGYLTESQRHGKAGYSLT
Sbjct: 193  PGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLT 252

Query: 908  KLLDRMRPRIHIIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESV 1087
            KLL R++  I +I+R HGQHSVILAEDLPKY+E    +S+ G +   ++QIYLTFPA+S 
Sbjct: 253  KLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADST 312

Query: 1088 FTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVK 1267
            FTEQDVS+YF+ FGPVQDVRIPCQQKRMFGFVTF++ ETV++IL KGNPH+ICGARVLVK
Sbjct: 313  FTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVK 372

Query: 1268 PYREKSRLAERKNAERKHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ--FXXXXXX 1441
            PYREK+  + R    R+H  +    F D D  +   S  R  + +RL+RKQ         
Sbjct: 373  PYREKA--SSRTVDRRQHPMYYSPHFIDEDSEL--QSIPRVCDNSRLLRKQQLMEEHEQA 428

Query: 1442 XXXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDES 1621
                    SE+Q   K      G        +S   + EQAE  ++ER  +LL+VL + S
Sbjct: 429  LELERRRLSELQLTPKTAHPYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNNGS 488

Query: 1622 TGDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTVT 1744
            T ++R    S+ YN+QESSQGL+LPESPFA+   NSISTVT
Sbjct: 489  TSEDR----STNYNEQESSQGLNLPESPFASPIRNSISTVT 525


>ref|XP_002320513.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222861286|gb|EEE98828.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 554

 Score =  488 bits (1257), Expect = e-135
 Identities = 278/559 (49%), Positives = 352/559 (62%), Gaps = 57/559 (10%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTK+VY RIQ++EPE V KI+GY+LL+++GEREMIRLAFSPDN+I++  +KAK++
Sbjct: 1    MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60

Query: 416  LGFGPTNQPSTNSYWNPQPQPLTPDHNV--------------------------AXXXXX 517
            LG   T  P+  S     P P++  H                            A     
Sbjct: 61   LGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGSFWDAQVTDY 120

Query: 518  XXXXXXXXXXXDEQVEFPG--------------GNRCHPRFSTPGELPSKVCHYFSKGFC 655
                       D+Q+EF                G R   R  +  E P K+CHYF+KGFC
Sbjct: 121  RLQNQMQFLTSDDQLEFVNSDFSSSYFYPEPALGPRTSRRSPSLPEFPVKICHYFNKGFC 180

Query: 656  KHGSSCRYLHGNP-------------NEGFADDQLFSPRSVEKLEFELTELLRSRNGAPV 796
            KHG++CRY HG+P             NE   D+   SP S+EKLE ELTELL+SR G PV
Sbjct: 181  KHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHFISPGSLEKLELELTELLKSRRGVPV 240

Query: 797  SIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQHSVI 976
            SIA LPM+YY+K+GR LQAEGYLTESQRHGKAGYSLTKLL R++  I +I+R HGQHSVI
Sbjct: 241  SIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVI 300

Query: 977  LAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVRIPC 1156
            L ED+PKYLEY   +++ G +  G+RQIYLTFPAES FTEQDVS+YFS FGPVQDVRIPC
Sbjct: 301  LTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPC 360

Query: 1157 QQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERKNAER-KHAAHL 1333
            QQKRMFGFVTF++ ETV++IL+KGNPH +CGARVLVKPYREKSRL +RK AE+ +H    
Sbjct: 361  QQKRMFGFVTFVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLVDRKYAEKIQHPFFY 420

Query: 1334 CLQFDDGDPNMPTNSATRAINGTRLVRKQ-FXXXXXXXXXXXXXXSEIQAVHKPLA--AG 1504
               F DGD  +  +S  R  + +RL+RKQ                SE Q   KPLA  A 
Sbjct: 421  SQHFIDGDSEL--HSVPRVCDNSRLLRKQLMEEHEQALELERRRLSEFQLAPKPLARHAY 478

Query: 1505 HGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSSTYNDQESSQG 1684
            HG  +S+     SE   +Q    ++E F +  DVL + ST +E+ R T +  ++Q+S+QG
Sbjct: 479  HG--HSMDEFKLSEEQADQ--FPSAEHFNYWFDVLNNGSTSEEKHRHTRTNCSEQDSNQG 534

Query: 1685 LDLPESPFANSKANSISTV 1741
            ++LPESPFA++    ISTV
Sbjct: 535  VNLPESPFASAIGKGISTV 553


>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X2 [Citrus sinensis]
          Length = 581

 Score =  487 bits (1253), Expect = e-134
 Identities = 284/583 (48%), Positives = 361/583 (61%), Gaps = 81/583 (13%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD +ESTK VY RIQKLEPE VSKI+GYLLL+D+GER+MIRLAFSPD++I+S+ N+AK +
Sbjct: 1    MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60

Query: 416  ---------------------LGFGPTNQPST-------------NSYWNPQPQP----- 478
                                 L F P +  ST             + +W+PQ        
Sbjct: 61   LGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQ 120

Query: 479  ------LTPDHNVAXXXXXXXXXXXXXXXXDEQVE--------------FP----GGNRC 586
                  + P ++                  ++Q +              +P    G  R 
Sbjct: 121  VNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRT 180

Query: 587  HPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNPN-EGFA------------DDQLFS 727
              R  +  E P KVCHYF+KGFCKHG++CRY HG+P  E F+            +D +FS
Sbjct: 181  SRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFS 240

Query: 728  PRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLT 907
            P S+E+LE E+TELL+ R G P+SIA LPM+YY+K+G+TLQAEGYLTESQRHGKAGYSLT
Sbjct: 241  PGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLT 300

Query: 908  KLLDRMRPRIHIIERA---HGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPA 1078
            KLL R++  I +I+R    HGQHSVILAED+P YLEY+  +S+ G +  G+RQIYLTFPA
Sbjct: 301  KLLARLKNSIRLIDRCNLPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIYLTFPA 360

Query: 1079 ESVFTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARV 1258
            ES FTEQDVS+YFS FGPVQDVRIPCQQKRMFGFVTF++ ETV++ILAKGNPHF+CGARV
Sbjct: 361  ESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARV 420

Query: 1259 LVKPYREKSRLAERKNAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ-FXXX 1432
            LVKPYREKSRL +RK  E+ +H     L F DGD  + T    R  N +RL+RKQ     
Sbjct: 421  LVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHT--MPRVCNNSRLLRKQLMEEH 478

Query: 1433 XXXXXXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLK 1612
                       SE+Q   KP+       YS+  L  SE   EQ +  ++ERF +LLDVL 
Sbjct: 479  EQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLN 538

Query: 1613 DESTGDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTV 1741
            + ST +++    S+ YNDQ+ SQGL+LPESPFA+   + ISTV
Sbjct: 539  NGSTSEDQVSHISTHYNDQD-SQGLNLPESPFASPIGSGISTV 580


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
            vinifera]
          Length = 572

 Score =  479 bits (1233), Expect = e-132
 Identities = 285/580 (49%), Positives = 345/580 (59%), Gaps = 77/580 (13%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTK+VY RIQKLEPE VSKI+GYLLL+D+GER+MIR AF+ DN I  + NKAK E
Sbjct: 1    MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60

Query: 416  LGFG-----------PTNQPST-------------------------NSYWNPQ------ 469
            LG             P   PS                          NSYW+PQ      
Sbjct: 61   LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSPRPGNSYWDPQVNGDQQ 120

Query: 470  ---------PQPLT---PD--------HNVAXXXXXXXXXXXXXXXXDEQVEFPGGNRCH 589
                     PQ  +   PD        H +A                    E     R  
Sbjct: 121  QVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLENSVGSEFSGSYYYAEQALNTRIS 180

Query: 590  PRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNP-------------NEGFADDQLFSP 730
             R  +  E P KVCHYF+KGFCKHG+SCRY HG+P             NE   DD +F P
Sbjct: 181  RRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHVFPP 240

Query: 731  RSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTK 910
             S+EKLE ELTELL+SR G PVSIA LPM+YY+K+GRTLQAEGYLTESQRHGKAGYSLTK
Sbjct: 241  GSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTK 300

Query: 911  LLDRMRPRIHIIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVF 1090
            LL R++  I +I+R HGQHSVILAEDLPKY+E    +S+ G +   ++QIYLTFPA+S F
Sbjct: 301  LLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSSKQIYLTFPADSTF 360

Query: 1091 TEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKP 1270
            TEQDVS+YF+ FGPVQDVRIPCQQKRMFGFVTF++ ETV++IL KGNPH+ICGARVLVKP
Sbjct: 361  TEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGNPHYICGARVLVKP 420

Query: 1271 YREKSRLAERKNAERKHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ--FXXXXXXX 1444
            YREK+  + R    R+H  +    F D D  +   S  R  + +RL+RKQ          
Sbjct: 421  YREKA--SSRTVDRRQHPMYYSPHFIDEDSEL--QSIPRVCDNSRLLRKQQLMEEHEQAL 476

Query: 1445 XXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDEST 1624
                   SE+Q   K      G        +S   + EQAE  ++ER  +LL+VL + ST
Sbjct: 477  ELERRRLSELQLTPKTAHPYFGYSMDEFKQHSDAAHAEQAEFPSAERLNYLLEVLNNGST 536

Query: 1625 GDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTVT 1744
             ++R    S+ YN+QESSQGL+LPESPFA+   NSISTVT
Sbjct: 537  SEDR----STNYNEQESSQGLNLPESPFASPIRNSISTVT 572


>ref|XP_006363020.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform
            X1 [Solanum tuberosum] gi|565394754|ref|XP_006363021.1|
            PREDICTED: zinc finger CCCH domain-containing protein
            18-like isoform X2 [Solanum tuberosum]
          Length = 531

 Score =  469 bits (1208), Expect = e-129
 Identities = 267/553 (48%), Positives = 337/553 (60%), Gaps = 54/553 (9%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTK+VY RIQKLE E VSKI+GYLL RD+GE++MIRLAF PDNVIHS+ NKAK  
Sbjct: 3    MDFSESTKVVYNRIQKLESEHVSKIIGYLLYRDHGEQDMIRLAFCPDNVIHSLINKAKNS 62

Query: 416  LGFGP-------------------------TNQPSTNSYWNPQ-PQPLTPDHNVAXXXXX 517
            LG  P                         TN    N YW  Q P    P HN+      
Sbjct: 63   LGLSPKPAISGPLSPPLKFGLFSSASPRPFTNHQLGNPYWEHQGPAENRPIHNLDLLPVG 122

Query: 518  XXXXXXXXXXXDEQVEFPG--------------GNRCHPRFSTPGELPSKVCHYFSKGFC 655
                         Q++F                G R   R S+  E+P K+CHYF+KG+C
Sbjct: 123  CSDPMTDEHQLQNQLQFLSLDDHSDHNFVGRTFGPRSCRRSSSLPEIPVKICHYFNKGYC 182

Query: 656  KHGSSCRYLHGNP-------------NEGFADDQLFSPRSVEKLEFELTELLRSRNGAPV 796
            KHG++CRY+HG P             N+   D+ + SP S+EKLE ELT+LL+ + G PV
Sbjct: 183  KHGNNCRYVHGYPTPESFSQVFNGNLNDVVTDEHVISPGSLEKLEMELTQLLKFKGGDPV 242

Query: 797  SIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQHSVI 976
            SIA LPMLY++ FGRTLQAEGYLTESQRHGKAGYSLTKLL R+R  I +I+R HGQH+VI
Sbjct: 243  SIASLPMLYHEMFGRTLQAEGYLTESQRHGKAGYSLTKLLARLRNSIRVIDRPHGQHAVI 302

Query: 977  LAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVRIPC 1156
            LA+D+ KYLE +  ++EHG +   +RQIYLTFPAES F+EQDVS+YFS FGPVQDVRIPC
Sbjct: 303  LAKDIHKYLECSGERNEHGAIVADSRQIYLTFPAESTFSEQDVSNYFSHFGPVQDVRIPC 362

Query: 1157 QQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERKNAERKHAAHLC 1336
            QQKRMFGFVTF Y ETV++IL++GNPH +C ARVLVKPYREKS+L +RK  E+ + A   
Sbjct: 363  QQKRMFGFVTFAYTETVKQILSRGNPHLVCDARVLVKPYREKSKLVDRKFPEKAYQASCY 422

Query: 1337 LQFDDGDPNMPTNSATRAINGTRLVRKQFXXXXXXXXXXXXXXSEIQAVHKPLAAGHGID 1516
              F     N  +   +         +++F               E+Q  H  +  G    
Sbjct: 423  NPF----ANAESEHQSLHRRAIEFEKRRF--------------QELQ--HHQMRVG---- 458

Query: 1517 YSITGL-YSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSSTYNDQESSQGLDL 1693
            YS+  L  +SEG+ EQ E  ++E F ++LDV  + ST + + R   + + DQES QGL+L
Sbjct: 459  YSVEDLKLASEGHNEQLEFPSAEGFSYVLDVWNNGSTSNNKTRHVKTNHYDQESGQGLNL 518

Query: 1694 PESPFANSKANSI 1732
            P+SPFA+   NSI
Sbjct: 519  PDSPFASPTRNSI 531


>ref|XP_006447767.1| hypothetical protein CICLE_v10014902mg [Citrus clementina]
            gi|557550378|gb|ESR61007.1| hypothetical protein
            CICLE_v10014902mg [Citrus clementina]
          Length = 524

 Score =  468 bits (1204), Expect = e-129
 Identities = 268/528 (50%), Positives = 339/528 (64%), Gaps = 26/528 (4%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMI------RLAFSP--DNVIHS 391
            MD +ESTK VY RIQKLEPE VSKI+GYLLL+D+     +      R A SP  D  + +
Sbjct: 1    MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHASTRPVSSPASMRAAASPFWDPQMAA 60

Query: 392  ITNKAKTELGF---GPTNQPSTNSYWNPQPQPLTPDHNVAXXXXXXXXXXXXXXXXDEQV 562
               +    + F   G ++  + +     Q Q LT +                    +  +
Sbjct: 61   DQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL 120

Query: 563  EFPGGNRCHPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNPN-EGFA---------- 709
               G  R   R  +  E P KVCHYF+KGFCKHG++CRY HG+P  E F+          
Sbjct: 121  ---GHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDI 177

Query: 710  --DDQLFSPRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRH 883
              +D +FSP S+E+LE E+TELL+ R G P+SIA LPM+YY+K+G+TLQAEGYLTESQRH
Sbjct: 178  RNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRH 237

Query: 884  GKAGYSLTKLLDRMRPRIHIIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIY 1063
            GKAGYSLTKLL R++  I +I+R HGQHSVILAED+P YLEY+  +S+ G +  G+RQIY
Sbjct: 238  GKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDVPNYLEYSGEKSDPGGIVAGSRQIY 297

Query: 1064 LTFPAESVFTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFI 1243
            LTFPAES FTEQDVS+YFS FGPVQDVRIPCQQKRMFGFVTF++ ETV++ILAKGNPHF+
Sbjct: 298  LTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFV 357

Query: 1244 CGARVLVKPYREKSRLAERKNAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ 1420
            CGARVLVKPYREKSRL +RK  E+ +H     L F DGD  + T    R  N +RL+RKQ
Sbjct: 358  CGARVLVKPYREKSRLVDRKYVEKMQHPLFCSLHFTDGDTELHT--MPRVCNNSRLLRKQ 415

Query: 1421 -FXXXXXXXXXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFL 1597
                            SE+Q   KP+       YS+  L  SE   EQ +  ++ERF +L
Sbjct: 416  LMEEHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYL 475

Query: 1598 LDVLKDESTGDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTV 1741
            LDVL + ST +++    S+ YNDQ+SSQGL+LPESPFA+   + ISTV
Sbjct: 476  LDVLNNGSTSEDQVSHISTHYNDQDSSQGLNLPESPFASPIGSGISTV 523


>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
            gi|548839320|gb|ERM99613.1| hypothetical protein
            AMTR_s00088p00158600 [Amborella trichopoda]
          Length = 575

 Score =  459 bits (1182), Expect = e-126
 Identities = 271/569 (47%), Positives = 341/569 (59%), Gaps = 71/569 (12%)
 Frame = +2

Query: 248  ESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTELGFG 427
            EST+ V+ RIQKLEPE VSKIVGYLLLRDNGEREM  LA  PD++I S+ NKAK+ELG  
Sbjct: 13   ESTRTVFSRIQKLEPENVSKIVGYLLLRDNGEREMNELAVCPDSLIISLINKAKSELGLA 72

Query: 428  -------------------------------PTNQPSTNS--YWNPQP---QPLTPDHNV 499
                                           P + P+T +  YW  QP   Q    + ++
Sbjct: 73   SKPQISTQIPQNSFNSDLPLPFTPFSLSTSRPFSSPATFAPPYWEHQPGTDQQALLNLDL 132

Query: 500  AXXXXXXXXXXXXXXXXDEQVE--FPGGN------------------RCHPRFSTPGELP 619
                             D+Q+E   P G                   R   R S+  E+P
Sbjct: 133  VSPEEYRFQNQAHSLGLDDQLEPVNPLGAELQNEYFYQEPTLASLSARTSRRTSSMPEIP 192

Query: 620  SKVCHYFSKGFCKHGSSCRYLHG-------------NPNEGFADDQLFSPRSVEKLEFEL 760
            SK+C YF +GFCKHG++CR+ HG             +P E   DD + S  ++E+LE EL
Sbjct: 193  SKLCVYFQRGFCKHGNNCRFFHGQHGLDHFLTGFSTSPTESLGDDHMISSGTLERLEMEL 252

Query: 761  TELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIH 940
             +LLR++   P+SIA LP LYY++FG+TLQAEGYLTESQRHGKAGYSLTKLL R++  I 
Sbjct: 253  LQLLRAKR-TPISIASLPQLYYERFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIR 311

Query: 941  IIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFS 1120
            +I+R HGQH+V+LAED  KY EY + +++ G +  G+RQIYLTFPAES FTE+DVS+YF 
Sbjct: 312  LIDRPHGQHAVVLAEDAAKYTEYRSDRNDPGAIVAGSRQIYLTFPAESTFTEEDVSNYFR 371

Query: 1121 GFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAER 1300
             FGPVQDVRIPCQQKRMFGFVTF+YPETV+ IL KGNPHF+CGARVLVKPYREKSRL +R
Sbjct: 372  TFGPVQDVRIPCQQKRMFGFVTFMYPETVKMILNKGNPHFVCGARVLVKPYREKSRLVDR 431

Query: 1301 KNAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQF-XXXXXXXXXXXXXXSEI 1474
            K  E+  H  +    F D +P     S     +  RL+RKQ                SE 
Sbjct: 432  KYPEKIDHPVYYSPHFLDMEPEY--QSVPGIWDDARLIRKQLREEQEHAIELERRRLSEF 489

Query: 1475 QAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSS 1654
            Q   KPL+  +   Y +     SE   +Q    +++RFG+LLDVL  +S  D++ R  S 
Sbjct: 490  QMASKPLSHNY-FGYPMDDFKLSE---DQNGFPSTDRFGYLLDVLNSDSASDDKTRHASG 545

Query: 1655 TYNDQESSQGLDLPESPFANSKANSISTV 1741
             Y+DQESSQGL+LPESPFA+   NSISTV
Sbjct: 546  NYSDQESSQGLNLPESPFASPITNSISTV 574


>ref|XP_004293466.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
            [Fragaria vesca subsp. vesca]
          Length = 566

 Score =  446 bits (1147), Expect = e-122
 Identities = 268/572 (46%), Positives = 338/572 (59%), Gaps = 69/572 (12%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTK+VY RIQKL+PE V KI+G LLL+++GER MIRLAFSPDN+I S+ NKAKTE
Sbjct: 1    MDFSESTKVVYSRIQKLDPENVGKIIGILLLQEHGERNMIRLAFSPDNLIQSVINKAKTE 60

Query: 416  LGFGPTNQPSTNSYWN-----PQPQPLTPDHNVAXXXXXXXXXXXXXXXXDEQVEFPGGN 580
            L     + P + S  N       P   TP                       + +  G  
Sbjct: 61   LCKHVVSSPISPSQVNQVAVSDLPMQFTPYSPSLTRPISCPTTLGAANPFSREAQVAGDQ 120

Query: 581  RCHPR--FSTPGELPSKVCHY------------FSKGFC--------------------- 655
            +      F  PG L S    Y            FS   C                     
Sbjct: 121  QPLQAVDFIPPGYLDSAAEDYCLQSHQMQFLPDFSSNICYHEPALGVRTRRSPSLPEFPL 180

Query: 656  -----------KHGSSCRYLHG-------------NPNEGFADDQLFSPRSVEKLEFELT 763
                       KHG++CRY HG             N NE   DD + SP S+EKLE+E+ 
Sbjct: 181  KVCHYFSKGFCKHGNNCRYFHGHAMPESFSQFFCPNSNEAQGDDHVVSPGSLEKLEYEII 240

Query: 764  ELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHI 943
            ELL+SR G P+SIA LPM+YY+K+GRTLQAEGYLTESQRHGKAGYSLTKLL R++  I +
Sbjct: 241  ELLKSRRGFPISIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRL 300

Query: 944  IERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSG 1123
            I+R HGQHSVILAED+PKYLEYT  ++E G +  G+RQIYLTFPAES FTEQDVS+YF+ 
Sbjct: 301  IDRPHGQHSVILAEDIPKYLEYTGEKTEPGGIIAGSRQIYLTFPAESNFTEQDVSNYFNK 360

Query: 1124 FGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERK 1303
            +GPVQDVRIPCQQKRMFGFVTFLY +TVR IL+KGNPHF+CGARVLVKPYREKSR  +RK
Sbjct: 361  YGPVQDVRIPCQQKRMFGFVTFLYADTVRHILSKGNPHFVCGARVLVKPYREKSRPVDRK 420

Query: 1304 NAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQF-XXXXXXXXXXXXXXSEIQ 1477
             +++ +H+      + D D ++  +S  R  + +RL+RKQF               SE+ 
Sbjct: 421  FSDKMQHSPCFNSHYIDADADL--HSMPRICDSSRLLRKQFIEEHQQVLECERRRRSEMH 478

Query: 1478 AVHKPLAAGHGI--DYSITGLYSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTS 1651
               KPL+  H +   YS+      E   +QAE   ++ F  LLD   + S  +++ R  +
Sbjct: 479  LAAKPLSHHHHLYYGYSMDDFKHPEANADQAEFPYAKEFNILLDAWNNASISEDKIRHIN 538

Query: 1652 STYND-QESSQGLDLPESPFANSKANSISTVT 1744
            + Y D Q+SSQG+ LPESPF    A+++STVT
Sbjct: 539  TNYTDHQDSSQGIILPESPF----ASAVSTVT 566


>ref|XP_004243548.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
            [Solanum lycopersicum]
          Length = 532

 Score =  434 bits (1115), Expect = e-118
 Identities = 257/556 (46%), Positives = 333/556 (59%), Gaps = 57/556 (10%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            M+ SEST+ VY RIQKLEP+ V+KI+ YL+ + +GE++MIRLAFSP+NVI SI NKAK +
Sbjct: 3    MNFSESTRDVYNRIQKLEPDHVNKIIVYLIDQHHGEQDMIRLAFSPENVIRSIVNKAKND 62

Query: 416  LGF--------GP------------------TNQPSTNSYWNPQPQPLT-PDHNVAXXXX 514
            LG         GP                  TN    N YW  Q Q    P H+      
Sbjct: 63   LGLLSPKPAISGPLSPPLKFGLFSSASPRPFTNHQVGNLYWEHQGQAENRPIHSSDILPA 122

Query: 515  XXXXXXXXXXXXDEQVEFPG--------------GNRCHPRFSTPGELPSKVCHYFSKGF 652
                          Q+ F                G R   R S+  E+P K+CHYF+KG+
Sbjct: 123  GCSDPMTDEYQLQNQLHFLSLYDHSDHNFVGRTFGPRSSRRTSSLPEIPVKICHYFNKGY 182

Query: 653  CKHGSSCRYLH-------------GNPNEGFADDQLFSPRSVEKLEFELTELLRSRNGAP 793
            CKHG++CRY+H             GN N+   D+   SP S++KLE ELT+LL+S+ G P
Sbjct: 183  CKHGNNCRYVHAYPTQESFSQVFNGNLNDVVTDEHAISPGSLKKLEMELTQLLKSKGGDP 242

Query: 794  VSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQHSV 973
            VSIA LPMLY++ FGRTLQAEGYLTESQRHGKAGYSLTKLL R+R  I +I+R HGQH+V
Sbjct: 243  VSIASLPMLYHEMFGRTLQAEGYLTESQRHGKAGYSLTKLLSRLRNSIRVIDRPHGQHAV 302

Query: 974  ILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVRIP 1153
            ILA+D+ KYLE    ++EHG +   +RQIYLTFPAES F+EQDVS+YF+ FGPVQDVRIP
Sbjct: 303  ILAKDIHKYLECNGERNEHGAIVADSRQIYLTFPAESTFSEQDVSNYFTQFGPVQDVRIP 362

Query: 1154 CQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERKNAERKHAAHL 1333
            CQQKRMFGFVTF Y ETV++IL++GNPH +C ARVLVKPYREKS+L +RK  E+ + A  
Sbjct: 363  CQQKRMFGFVTFAYTETVKQILSRGNPHLVCDARVLVKPYREKSKLVDRKCPEKAYQASC 422

Query: 1334 CLQFDDGDPNMPTNSATRAIN--GTRLVRKQFXXXXXXXXXXXXXXSEIQAVHKPLAAGH 1507
                   +P     SA ++++       R++F               E Q  H  +  G 
Sbjct: 423  Y------NPFAHAVSAHQSLHRRAIEFERRRF--------------EEFQ--HYQMHVG- 459

Query: 1508 GIDYSITGL-YSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSSTYNDQESSQG 1684
               YSI  L  +SEG+ EQ +  ++E F ++L+V  + S  + +     + + DQE  Q 
Sbjct: 460  ---YSIENLKLASEGHSEQLDFPSAEGFPYMLNVWNNGSASNNKTSLVKTNHYDQERFQV 516

Query: 1685 LDLPESPFANSKANSI 1732
            L+LPESPFA+   NSI
Sbjct: 517  LNLPESPFASPTRNSI 532


>gb|EXB67424.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
          Length = 556

 Score =  431 bits (1109), Expect = e-118
 Identities = 255/560 (45%), Positives = 340/560 (60%), Gaps = 58/560 (10%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SESTKI++ RIQ++EPE V+KI+GYLLL+D+GE+E+ RLA +P+ +I+    KAK+ 
Sbjct: 2    MDFSESTKILFNRIQEIEPENVTKIIGYLLLQDHGEQEVARLASAPEALIYQFILKAKSH 61

Query: 416  L--------------GFGPTNQPSTNSY---------WNPQPQPLTPDHNVAXXXXXXXX 526
            L               F P   PS+NS          W+        ++N +        
Sbjct: 62   LQQISLPSPIPSSPSSFSPIFSPSSNSRPFSSSTFHSWDHNASKHHNNNNNSEFLPLELP 121

Query: 527  XXXXXXXXDEQVE--------FPGGNRCH---------------PRFSTPGELPSKVCHY 637
                    ++Q+E        FP  N  +                  S+  E P K CHY
Sbjct: 122  KQAQFLSLEDQIEQINSGVSGFPSPNDVYYPDSGIGCLNSRPSRRSISSLSEFPIKTCHY 181

Query: 638  FSKGFCKHGSSCRYLHGN----------PNEGFADDQLFSPRSVEKLEFELTELLRSRNG 787
            F KGFCKHG+SCRY HG+           N+ F DD LFSP S+E+LE E+ ELL+SR G
Sbjct: 182  FLKGFCKHGTSCRYFHGHLAPENFSQVHGNDSFGDDHLFSPGSLEQLEVEIIELLKSRRG 241

Query: 788  APVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQH 967
             PVSIA LP +YY+K+G+ LQAEGYLTESQRHGKAGYSLTKLL R++  I +I+R HGQH
Sbjct: 242  NPVSIASLPAMYYEKYGKYLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQH 301

Query: 968  SVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVR 1147
            +VILAED  K+ +  + +S+ G +  G+RQIYLTFPAES FTE+DVS+YF+ FG V+DVR
Sbjct: 302  AVILAEDSQKFFDNRSEKSDPGPIVSGSRQIYLTFPAESTFTEEDVSNYFNTFGTVEDVR 361

Query: 1148 IPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERKNAERKHA- 1324
            IPCQQKRMFGFVTF   +TV+ ILAKGNPHF+CGARVLVKPYREKS+L +RK ++R  A 
Sbjct: 362  IPCQQKRMFGFVTFAIADTVKMILAKGNPHFVCGARVLVKPYREKSKLVDRKYSDRFEAP 421

Query: 1325 AHLCLQFDDGDPNMPTNSATRAINGTRLVRKQF-XXXXXXXXXXXXXXSEIQAVHKPLAA 1501
             +    + D +     +S +R+   +RL+R+QF               S +    KP+  
Sbjct: 422  VYYSPHYSDMEAEF--HSISRSYENSRLLRRQFMEQHERALELETRRLSGMHLAGKPVNN 479

Query: 1502 GHGIDYSITGLYSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSSTYNDQESSQ 1681
                 YS+  L  SE   +Q  L ++++   LLDVL   ST D++ + T + + DQE SQ
Sbjct: 480  QPFFGYSMDELKVSE---DQFTLPSTDQVSRLLDVLNCGSTSDDKFKHTDTHFTDQE-SQ 535

Query: 1682 GLDLPESPFANSKANSISTV 1741
             L+LP+SPFA+S A+ ISTV
Sbjct: 536  ALNLPDSPFASSIASGISTV 555


>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
            vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
            product [Vitis vinifera]
          Length = 544

 Score =  424 bits (1089), Expect = e-115
 Identities = 258/549 (46%), Positives = 325/549 (59%), Gaps = 47/549 (8%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
            MD SEST +V+ RIQKLEPE VSKI+GYLL++   + EMIRLAF PD  I  I    K E
Sbjct: 1    MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60

Query: 416  LGFGPTN-----------QPSTNSYW---NPQP--------------------QPLTPDH 493
            LG  P              PST S++   +P P                    QPL  + 
Sbjct: 61   LGLIPNPPSPISPHFPPLSPSTGSWFPSSSPSPVNRYLQHATEQLPKDYSLQSQPLGLEE 120

Query: 494  NVAXXXXXXXXXXXXXXXXDEQVEFPGGNRCHPRFSTPGELPSKVCHYFSKGFCKHGSSC 673
             +                 +  VE     R  PR     E P KVCHYF+KGFCKHG++C
Sbjct: 121  QLEQVNPAILGVSGDYYYPETAVENLSV-RTGPRSLIGSEFPVKVCHYFNKGFCKHGNNC 179

Query: 674  RYLHGN---------PNEGFADDQLFSPRSVEKLEFELTELLRSRNGAPVSIALLPMLYY 826
            RYLH            N+   DD +FSP S+EKLE ELTELL+SR G PVSIA LPM+YY
Sbjct: 180  RYLHAQVFPEVLSPIANDLANDDHIFSPGSIEKLELELTELLKSRRGNPVSIASLPMMYY 239

Query: 827  DKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQHSVILAEDLPKYLE 1006
            +++GR LQAEGYLTESQRHGKAGYSLTKLL R+R  I +I+R HGQHSVILAED+PKY+E
Sbjct: 240  ERYGRGLQAEGYLTESQRHGKAGYSLTKLLARLRT-IRLIDRPHGQHSVILAEDVPKYME 298

Query: 1007 YTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVT 1186
              + +S+ G +  G+RQIYLTFPAES FTE+DVS YFS FG V+DVRIPCQQKRMFGFVT
Sbjct: 299  SRSERSDPGPIVSGSRQIYLTFPAESTFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVT 358

Query: 1187 FLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAERKNAER-KHAAHLCLQFDDGDPN 1363
            F   +TV+ ILAKG+PH++CGARVLVKPYREK R  +RK  E+ + + +  LQ+ D D  
Sbjct: 359  FDSSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSE 418

Query: 1364 MPTNSATRAINGTRLVRKQF---XXXXXXXXXXXXXXSEIQAVHKPLAAGHGIDYSITGL 1534
            +  +   R +  +RL+RKQ                  S++Q    PLA      YS+  L
Sbjct: 419  L--HMMPRGMETSRLLRKQIMEEQEFAQDLEFETRRLSKLQLARNPLANQLHHGYSLDEL 476

Query: 1535 YSSEGYGEQAELMASERFGFLLDVLKDESTGDERARCTSSTYNDQESSQGLDLPESPFAN 1714
               E +   ++        + LDV  + ST D++     +   D +SS GL+LP+SPFA 
Sbjct: 477  KVLEAHANHSKFPTVVHSNYPLDVSNNGSTSDDKPWRAVNNPIDHKSS-GLELPDSPFAF 535

Query: 1715 SKANSISTV 1741
               +SIST+
Sbjct: 536  PIGSSISTI 544


>gb|EOX93474.1| CCCH-type zinc fingerfamily protein with RNA-binding domain, putative
            isoform 1 [Theobroma cacao] gi|508701579|gb|EOX93475.1|
            CCCH-type zinc fingerfamily protein with RNA-binding
            domain, putative isoform 1 [Theobroma cacao]
            gi|508701580|gb|EOX93476.1| CCCH-type zinc fingerfamily
            protein with RNA-binding domain, putative isoform 1
            [Theobroma cacao]
          Length = 545

 Score =  422 bits (1085), Expect = e-115
 Identities = 249/548 (45%), Positives = 321/548 (58%), Gaps = 80/548 (14%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSIT------ 397
            MD +ESTK+VY RIQ+LEPE VSKI+GY LL+D G+R+MIRLAF  D ++ S+       
Sbjct: 1    MDFTESTKVVYNRIQQLEPENVSKIIGYFLLQDQGDRDMIRLAFCSDTLLLSLINKAKSE 60

Query: 398  ---NKAKTELGFGPT-------------------------NQPST----NSYWNPQPQP- 478
               NK+   +   P+                         + P+T    + +W+PQ    
Sbjct: 61   LSLNKSAVSVPISPSQVIPSPVTDLPVQFTPYSPASSCTVSTPATIRASSPFWDPQVTAE 120

Query: 479  --------LTPDHNVAXXXXXXXXXXXXXXXXDEQVEFPG-----------------GNR 583
                    + P ++ A                 +Q+E                    G R
Sbjct: 121  QHVNNLEFVPPGYSDAVAEDYGLQNQMHFLNMGDQLESANSVSSEFLSNYYYSEPALGVR 180

Query: 584  CHPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNP-------------NEGFADDQLF 724
               R  +  E P K+CHYF+KGFCKHG++CRY HG+P             N+   DD + 
Sbjct: 181  TSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESLSQLFSRNSNDVGNDDHVI 240

Query: 725  SPRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAGYSL 904
            SP ++EKLE ELTELL++R G PVSIA LPMLYY+ +GRTLQAEGYLTESQRHGKAGYSL
Sbjct: 241  SPGTLEKLELELTELLKARRGLPVSIASLPMLYYEMYGRTLQAEGYLTESQRHGKAGYSL 300

Query: 905  TKLLDRMRPRIHIIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFPAES 1084
            TKLL R++  I +I+R HGQHSVILAED PKYLEY   +S+ G +  G+RQIYLTFPAES
Sbjct: 301  TKLLARLKNSIRLIDRPHGQHSVILAEDAPKYLEYAGERSDPGGIVAGSRQIYLTFPAES 360

Query: 1085 VFTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGARVLV 1264
             FTE+DVS+YF+ FGPVQDVRIPCQQKRMFGFVTF+Y ETV++ILAKGNPHF+CGARVLV
Sbjct: 361  TFTEEDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVYAETVKQILAKGNPHFVCGARVLV 420

Query: 1265 KPYREKSRLAERKNAER-KHAAHLCLQFDDGDPNMPTNSATRAINGTRLVRKQ-FXXXXX 1438
            KPYREKSR+ +RK  E+ +   +      DGD  +   S  R  + +RL+RKQ       
Sbjct: 421  KPYREKSRVVDRKFTEKVQQPMYYSPHLIDGDTEL--QSMPRVCDNSRLLRKQIIEDNEQ 478

Query: 1439 XXXXXXXXXSEIQAVHKPLAAGHG-IDYSITGLYSSEGYGEQAELMASERFGFLLDVLKD 1615
                     SE+Q   K     H    YS+  L  ++   EQ E  ++ER+ +LLDVL  
Sbjct: 479  VLEFEKRRFSELQLAPKQHLTNHSYFGYSMDELKHTD---EQVEFPSAERYNYLLDVLNT 535

Query: 1616 ESTGDERA 1639
             S   +++
Sbjct: 536  GSASGKKS 543


>ref|XP_006297381.1| hypothetical protein CARUB_v10013406mg [Capsella rubella]
            gi|482566090|gb|EOA30279.1| hypothetical protein
            CARUB_v10013406mg [Capsella rubella]
          Length = 539

 Score =  421 bits (1083), Expect = e-115
 Identities = 266/564 (47%), Positives = 330/564 (58%), Gaps = 61/564 (10%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLL-RDNGEREMIRLAFSPDNVIHSITNKAKT 412
            M+ +ES  +V+ RIQ+LEPE  SKI+GYLLL +DNG+R+MIRLAF PD+VIHS+ N  K 
Sbjct: 1    MNFTESMNVVHKRIQELEPENASKIIGYLLLMQDNGDRDMIRLAFCPDSVIHSVINCVKY 60

Query: 413  ELGFG-------PTNQ--PSTNSYWN-----PQPQPLTP-------DHNVAXXXXXXXXX 529
            EL          P++   PST+ + +     P    ++P       +++           
Sbjct: 61   ELAKNAHHYHSPPSSDHIPSTHKFGSFAGSSPLSVSVSPPMKTGFWENSAEMDSLQNNVQ 120

Query: 530  XXXXXXXDEQVEFPGG-----NRCHP-----RFSTPGELPSKVCHYFSKGFCKHGSSCRY 679
                       EF  G      +C P     R  +  E P K+CHYF+KGFCKHG++CRY
Sbjct: 121  FLNFEDSLTSPEFSNGFFSQERQCLPLRTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRY 180

Query: 680  LHG-------------NPNEGFADDQ-LFSPRSVEKLEFELTELLRSRNGAPVSIALLPM 817
             HG             NPN   +D++ + SP S+EKLE E+ ELL+SR GAP+SIA LPM
Sbjct: 181  FHGQIIPERESFAQMFNPNNSLSDEEHVVSPGSLEKLEGEIIELLKSRRGAPISIASLPM 240

Query: 818  LYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQHSVILAEDLPK 997
            +YY+K+GRTLQAEGYLTESQRHGKAGYSLTKLL R++  I +I+R HGQHSVILAED  K
Sbjct: 241  MYYEKYGRTLQAEGYLTESQRHGKAGYSLTKLLARLKNTIRLIDRPHGQHSVILAEDESK 300

Query: 998  YLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVRIPCQQKRMFG 1177
            ++EYT  ++EHG +  G+RQIYLTFPAES FTE DVS+YFS FG V+DVRIPCQQKRMFG
Sbjct: 301  FVEYTGERNEHGAILAGSRQIYLTFPAESSFTEHDVSNYFSKFGHVEDVRIPCQQKRMFG 360

Query: 1178 FVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAE-RKNAERKHAAHLCLQFDDG 1354
            FVTF Y ETV+ ILAKGNPHFICGARVLVKPYREKSR +    N +         QF D 
Sbjct: 361  FVTFAYTETVKLILAKGNPHFICGARVLVKPYREKSRSSRYLDNNKPLQGMRYGSQFIDR 420

Query: 1355 DPNMPTNSATRAINGTRLVRKQFXXXXXXXXXXXXXXSEIQAVHKPLAAGHGIDYSITGL 1534
            D  M T    R    +R++RK F                 Q+V K L      +YS  G 
Sbjct: 421  DIEMNT-LPPRVSESSRIMRKPF------------PNEHEQSVSKSLPT----NYSYLGF 463

Query: 1535 YSSE----GYGEQAELMASERFGFLLDVLKDEST----------GDERARCTSSTYNDQE 1672
             S +       EQ E   +ER  +LLD L  E             D R  C S       
Sbjct: 464  SSDDFKLTSNAEQEE--QAERLSYLLDYLNTEDNVMNITTNYRDNDRRTHCESL------ 515

Query: 1673 SSQGLDLPESPFANSKANSISTVT 1744
             SQ L+LPESPF++     ISTVT
Sbjct: 516  DSQVLNLPESPFSSLSGKEISTVT 539


>ref|XP_006293001.1| hypothetical protein CARUB_v10019278mg [Capsella rubella]
            gi|482561708|gb|EOA25899.1| hypothetical protein
            CARUB_v10019278mg [Capsella rubella]
          Length = 542

 Score =  412 bits (1058), Expect = e-112
 Identities = 255/563 (45%), Positives = 327/563 (58%), Gaps = 60/563 (10%)
 Frame = +2

Query: 236  MDSSESTKIVYCRIQKLEPELVSKIVGYLLL-RDNGEREMIRLAFSPDNVIHSITNKAKT 412
            M+ +E+  +V+ RI +LEPE  SKI+GYLLL +D+ +R+MIRLAF PD+V+ S+ N    
Sbjct: 1    MNFTEAMNVVHNRIHQLEPENASKIIGYLLLMQDHNDRDMIRLAFCPDSVMLSMINCVTY 60

Query: 413  ELGFGPT-NQPSTN--------SYWNPQPQPL----TPDHNVAXXXXXXXXXXXXXXXXD 553
            EL      N PS++        S+     Q L    +P   ++                 
Sbjct: 61   ELAKNSHYNIPSSHHIQIRKFGSFTGSPNQSLLVSVSPPSVLSMGTSFWETTNEMDSSLQ 120

Query: 554  EQVEFPGGNRCHPRFSTP--------------------GELPSKVCHYFSKGFCKHGSSC 673
              V+F       P FST                      E P K+CHYF+KGFCKHG++C
Sbjct: 121  NNVQFLNFEDSCPEFSTSFFSQEKQGLSSRTSRRSPSLPEFPVKICHYFNKGFCKHGNNC 180

Query: 674  RYLHG-------------NPNEGFADDQ-LFSPRSVEKLEFELTELLRSRNGAPVSIALL 811
            RY HG             NPN   +DD+ + S  S+EKLE E+ ELL+SR GAP+SIA L
Sbjct: 181  RYFHGHIKPDRDSFAQMFNPNNNLSDDEHVVSSCSLEKLEGEIIELLKSRRGAPISIASL 240

Query: 812  PMLYYDKFGRTLQAEGYLTESQRHGKAGYSLTKLLDRMRPRIHIIERAHGQHSVILAEDL 991
            PM+YY+K+G+TLQAEGYLTESQRHGKAGYSLTKLL R++  I +I+R HGQHSVILA+D+
Sbjct: 241  PMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAQDV 300

Query: 992  PKYLEYTNGQSEHGFVPIGARQIYLTFPAESVFTEQDVSHYFSGFGPVQDVRIPCQQKRM 1171
             K++EY   + E G +  G+RQIYLTFPAES F E DVS+YFS FGPV+DVRIPCQQKRM
Sbjct: 301  SKFVEYKGERHEQGAILAGSRQIYLTFPAESSFNEYDVSNYFSKFGPVEDVRIPCQQKRM 360

Query: 1172 FGFVTFLYPETVRKILAKGNPHFICGARVLVKPYREKSRLAER-KNAERKHAAHLCLQFD 1348
            FGFVTF Y ETV+ ILAKGNPHFICGARVLVKPYREKSR      N +  H    C Q+ 
Sbjct: 361  FGFVTFAYTETVKHILAKGNPHFICGARVLVKPYREKSRSGGYIDNNKPLHDIRCCSQYI 420

Query: 1349 DGDPNMPTNSATRAINGTRLVRKQFXXXXXXXXXXXXXXSEIQAVHKPLAAGHGIDYSIT 1528
            D D  M T    R  + +RL++KQF                +Q+V + L +    DYS  
Sbjct: 421  DKDTEMNT-MPMRVSDSSRLMKKQF------------LEEHMQSVSRSLPS----DYSYL 463

Query: 1529 GLYSSE---GYGEQAELMASERFGFLLDVLKDESTGDERARCTSSTYNDQE--------S 1675
            G  S++      E+ +   + R  +LLD L  E    +    TS+TYND +         
Sbjct: 464  GFSSNDFKLTTDEEEQEEQAGRLSYLLDYLNTE----DNVMDTSTTYNDNDRRMHCESLD 519

Query: 1676 SQGLDLPESPFANSKANSISTVT 1744
            SQ LDLP+SPF++     IS  T
Sbjct: 520  SQALDLPDSPFSSLFGKEISLAT 542


>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
            gi|223525472|gb|EEF28048.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 578

 Score =  409 bits (1052), Expect = e-111
 Identities = 226/407 (55%), Positives = 283/407 (69%), Gaps = 18/407 (4%)
 Frame = +2

Query: 575  GNRCHPRFSTPGELPSKVCHYFSKGFCKHGSSCRYLHGNPN-EGFA------------DD 715
            G R + R  +  E P K+CHYFSKG+CKHG++CRY+HG+P  EGF+            D+
Sbjct: 180  GPRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSNDE 239

Query: 716  QLFSPRSVEKLEFELTELLRSRNGAPVSIALLPMLYYDKFGRTLQAEGYLTESQRHGKAG 895
             + SP S+EKLE EL ELL+SR G PVSIA LPM+YY+K+G+TLQAEGYLTESQRHGKAG
Sbjct: 240  HVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGKAG 299

Query: 896  YSLTKLLDRMRPRIHIIERAHGQHSVILAEDLPKYLEYTNGQSEHGFVPIGARQIYLTFP 1075
            YSLTKLL R++  I +I+R HGQHSVIL ED+PKYLEY   +++ G +  G+RQIYLTFP
Sbjct: 300  YSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYLTFP 359

Query: 1076 AESVFTEQDVSHYFSGFGPVQDVRIPCQQKRMFGFVTFLYPETVRKILAKGNPHFICGAR 1255
            AES+FTE DVS YFS FGPVQDVRIPCQQKRMFGFVTF++ ETV++ILAKGNPH++CGAR
Sbjct: 360  AESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCGAR 419

Query: 1256 VLVKPYREKSRLAERKNAER-KHAAHLCLQFDDGDPN---MPTNSATRAINGTRLVRKQ- 1420
            VLVKPYREKSRL +RK +E+ +H  +    F DGD     MPT S     + +RL+RKQ 
Sbjct: 420  VLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMPTIS-----DNSRLLRKQL 474

Query: 1421 FXXXXXXXXXXXXXXSEIQAVHKPLAAGHGIDYSITGLYSSEGYGEQAELMASERFGFLL 1600
                            E     K L     +  S+  L  SE   E AE  ++ERF +LL
Sbjct: 475  MEENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSE---EHAEFPSAERFNYLL 531

Query: 1601 DVLKDESTGDERARCTSSTYNDQESSQGLDLPESPFANSKANSISTV 1741
            DVL + S+ + + R  S+ YNDQ+ SQG++LPESPFA+   + ISTV
Sbjct: 532  DVLNNGSSSEGKFRRISTNYNDQD-SQGINLPESPFASPIRSGISTV 577



 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = +2

Query: 236 MDSSESTKIVYCRIQKLEPELVSKIVGYLLLRDNGEREMIRLAFSPDNVIHSITNKAKTE 415
           MD +ESTK+VY RIQKLEPE VSKI+GYLLL+D+ EREMIRLAFSPDN+I+S+  KAK++
Sbjct: 1   MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60

Query: 416 LGFGPTNQPSTNSYWNPQPQPLTP 487
           LG    N+P+ ++  +P     +P
Sbjct: 61  LGL---NKPALSAPISPSQVNTSP 81