BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006264
         (1133 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...   148   3e-33
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]   142   3e-31
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260...   139   2e-30
ref|XP_002303490.2| hypothetical protein POPTR_0003s10650g [Popu...   138   5e-30
ref|XP_006587708.1| PREDICTED: DNA-directed RNA polymerase III s...   137   8e-30
ref|XP_003534408.1| PREDICTED: DNA-directed RNA polymerase III s...   137   8e-30
gb|ACU24406.1| unknown [Glycine max]                                  137   8e-30
ref|XP_006591962.1| PREDICTED: uncharacterized protein LOC100787...   134   7e-29
gb|EOY22841.1| DNA binding protein, putative isoform 2 [Theobrom...   134   9e-29
ref|XP_004240014.1| PREDICTED: uncharacterized protein LOC101254...   130   1e-27
ref|XP_004167167.1| PREDICTED: uncharacterized protein LOC101227...   128   4e-27
ref|XP_002326279.1| predicted protein [Populus trichocarpa] gi|5...   125   2e-26
ref|XP_004514516.1| PREDICTED: DNA-directed RNA polymerase III s...   125   4e-26
ref|XP_004514515.1| PREDICTED: DNA-directed RNA polymerase III s...   125   4e-26
ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600...   124   7e-26
ref|XP_004146914.1| PREDICTED: uncharacterized protein LOC101207...   123   2e-25
gb|ESW03348.1| hypothetical protein PHAVU_011G006800g [Phaseolus...   122   3e-25
ref|XP_006490148.1| PREDICTED: DNA-directed RNA polymerase III s...   120   8e-25
ref|XP_006421620.1| hypothetical protein CICLE_v10005426mg [Citr...   119   2e-24
gb|EOY22840.1| DNA binding protein, putative isoform 1 [Theobrom...   118   4e-24

>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
           gi|223550094|gb|EEF51581.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 328

 Score =  148 bits (374), Expect = 3e-33
 Identities = 99/275 (36%), Positives = 139/275 (50%), Gaps = 39/275 (14%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTT----------------- 341
           DE  +++ L+ +F +  + Q    +KKS+V+VAFGPG T+ T+                 
Sbjct: 42  DEAVQAQKLMRKFNENFRRQGPRVEKKSTVQVAFGPGATSSTSIRTFGVSKGENPVSSGI 101

Query: 342 ----------------TSQKSILINESDETMKDALXXXXXXXXXXXXPWNYDGTYYPTTL 473
                           T ++  +IN + E + DAL            PW+YD TYYPTTL
Sbjct: 102 KDSTDDDGKIVISSLSTDKEDEIINCASEDI-DALPLKIKKDYRE--PWDYDRTYYPTTL 158

Query: 474 PIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXX 653
           P+RRPYSG+P +LDEAEFGEAAR  EY+E  +N A++L                      
Sbjct: 159 PLRRPYSGDPVLLDEAEFGEAARKLEYDESTMNPASDLELLEECDTEKMIFFQLPAKLPL 218

Query: 654 XXXXVSSHFKGKEPI-----GQAARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETL 818
                S+  KGKE        Q   A++K S    L AG +GK++VY SGA+KLKLG+TL
Sbjct: 219 VKRSASA--KGKEKAEGSIPSQGKNAAKKESSLDGLSAGYMGKMLVYRSGAVKLKLGDTL 276

Query: 819 HDVYPGTG-NACEHVMAMNYGTKDCCLLGQVENHA 920
           +DV  G+     + VMA+N   K CC +G++E  A
Sbjct: 277 YDVSQGSDCMFAQDVMAINTAAKHCCTIGELEKRA 311


>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
          Length = 348

 Score =  142 bits (357), Expect = 3e-31
 Identities = 111/329 (33%), Positives = 143/329 (43%), Gaps = 61/329 (18%)
 Frame = +3

Query: 105 MDQKNPSSSSTRKLXXXXXXXXXXXXXXXXXXXSGADEDTES---ELLLSRFRKKLQSQQ 275
           MD    SS S RK+                     A+E+ E+   + LL R  +KL+ Q 
Sbjct: 1   MDHNESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQG 60

Query: 276 HTNDKKSSVRVAFGPGHTTPTTTSQ------------------------------KSILI 365
              +K SSV+V FGPG  TP+ T +                               S   
Sbjct: 61  PKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSXST 120

Query: 366 NESDET---MKDALXXXXXXXXXXXXPWNYDGTYYPTTLPIRRPYSGNPGILDEAEFGEA 536
            + DET     DA             PW+Y  +YYPTTLP+R+P+SG+P ILDEAEFGEA
Sbjct: 121 TKPDETNGXFADATDDSAQIRKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEA 180

Query: 537 ARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSHFKGKEPIG----- 701
           + N EY+EK IN A+ELG                          S+  KGKE +G     
Sbjct: 181 STNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLVKQSASA--KGKEIVGNSTSL 238

Query: 702 ----------QAARASQKCSGWG---------DLPAGRIGKLIVYSSGAIKLKLGETLHD 824
                     Q AR+S      G         DL  G  GK++VY SGAIKLKLGE L+D
Sbjct: 239 EGIYASAKGKQVARSSLSSKSIGTSEHSCRLEDLAGGHXGKMLVYKSGAIKLKLGEILYD 298

Query: 825 VYPGTGNAC-EHVMAMNYGTKDCCLLGQV 908
           V PG    C + V+A+N   K C  LG++
Sbjct: 299 VSPGLDCTCVQDVVAINTVDKHCYALGEL 327


>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
           gi|297745083|emb|CBI38675.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  139 bits (351), Expect = 2e-30
 Identities = 114/329 (34%), Positives = 147/329 (44%), Gaps = 61/329 (18%)
 Frame = +3

Query: 105 MDQKNPSSSSTRKLXXXXXXXXXXXXXXXXXXXSGADEDTES---ELLLSRFRKKLQSQQ 275
           MD    SS S RK+                     A+E+ E+   + LL R  +KL+ Q 
Sbjct: 1   MDHNESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQG 60

Query: 276 HTNDKKSSVRVAFGPGHTTPTTT-----------SQKS--------------ILIN---- 368
              +K SSV+V FGPG  TP+ T           S KS              I ++    
Sbjct: 61  PKVEKTSSVQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKVSTPDHEEIAVSSPST 120

Query: 369 -ESDET---MKDALXXXXXXXXXXXXPWNYDGTYYPTTLPIRRPYSGNPGILDEAEFGEA 536
            + DET     DA             PW+Y  +YYPTTLP+R+P+SG+P ILDEAEFGEA
Sbjct: 121 TKPDETNGYFADATDDSAQIRKRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEA 180

Query: 537 ARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSHFKGKEPI------ 698
           + N EY+EK IN A+ELG                          S+  KGKE +      
Sbjct: 181 STNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLFKQSPSA--KGKEIVENSTSL 238

Query: 699 ---------GQAARASQKCSGWG---------DLPAGRIGKLIVYSSGAIKLKLGETLHD 824
                     Q AR+S      G         DL  G IGK++VY SGAIKLKLGE L+D
Sbjct: 239 EGIYASAKGKQVARSSLSSKSIGTSEHSCRLEDLAGGHIGKMLVYKSGAIKLKLGEILYD 298

Query: 825 VYPGTGNAC-EHVMAMNYGTKDCCLLGQV 908
           V PG    C + V+A+N   K C  LG++
Sbjct: 299 VSPGLDCTCVQDVVAINTVDKHCYALGEL 327


>ref|XP_002303490.2| hypothetical protein POPTR_0003s10650g [Populus trichocarpa]
           gi|550342916|gb|EEE78469.2| hypothetical protein
           POPTR_0003s10650g [Populus trichocarpa]
          Length = 368

 Score =  138 bits (347), Expect = 5e-30
 Identities = 89/266 (33%), Positives = 134/266 (50%), Gaps = 30/266 (11%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTTTSQK------------- 353
           +E  ++++L+ +F + L+ +Q   +KK  V+VAFGPG  +P    +K             
Sbjct: 89  EEAAQAQMLIHKFNENLR-RQVPKEKKPQVQVAFGPGAPSPPLLIRKYNVPVHENTGSSW 147

Query: 354 -----------SILINESDETMKDALXXXXXXXXXXXX-PWNYDGTYYPTTLPIRRPYSG 497
                       I +  S   +  A+             PW+Y   YYP TLP+R PYSG
Sbjct: 148 SGTEDTRDDDGKIFVPPSAARVDGAINPLSLKGKRRYKEPWDYHHIYYPNTLPLRPPYSG 207

Query: 498 NPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSH 677
           +P +LDEAEFGE ARN EY+E  IN A++LG                          S+ 
Sbjct: 208 DPKLLDEAEFGEEARNLEYDETTINPASDLGLLEECDNERLFFFQVPEKLPFLKRSASA- 266

Query: 678 FKGKE----PIGQAARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLHDVYPGTG- 842
            KGKE     +   ++++ + + + +LP G +GK++VY SGAIKLKLG+ L+DV PG+  
Sbjct: 267 -KGKERADMSMPSESKSAARKTSFEELPKGYMGKMLVYRSGAIKLKLGDALYDVSPGSEC 325

Query: 843 NACEHVMAMNYGTKDCCLLGQVENHA 920
              + VMA+N   KDCC +G++   A
Sbjct: 326 TFAQDVMAINTAGKDCCAIGELGKRA 351


>ref|XP_006587708.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X2
           [Glycine max]
          Length = 292

 Score =  137 bits (345), Expect = 8e-30
 Identities = 98/259 (37%), Positives = 132/259 (50%), Gaps = 27/259 (10%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTN-DKKSSVRVAFGPG----HTTPTTTSQKSI------ 359
           +ED+E    LSR R +  +++    ++KSSV VAF  G    H+  T  + KSI      
Sbjct: 35  NEDSEVPRALSRRRHENPAKREPKVERKSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSS 94

Query: 360 ------LINE-----SDETMKDALXXXXXXXXXXXX-PWNYDGTYYPTTLPIRRPYSGNP 503
                   NE     + E   DA              PW+Y+ +YYPTTLP+R+P SG+P
Sbjct: 95  GSPSKYFANEQIRSIATEDQNDASNASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDP 154

Query: 504 GILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSHFK 683
            ILDE EFGEAA + EY+E  +N+AAEL                               K
Sbjct: 155 EILDEKEFGEAATSVEYDENTVNSAAELEILIPTPLPMD----------------KQSNK 198

Query: 684 GKEPIGQ---AARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLHDVYPGTGNAC- 851
           GKE IG    +  A++  +   +LP G +GK++VY SGAIKLKLGETL DV PG+   C 
Sbjct: 199 GKEKIGTSTVSGEATKSKNALEELPRGYMGKMLVYKSGAIKLKLGETLLDVSPGSNCRCV 258

Query: 852 EHVMAMNYGTKDCCLLGQV 908
           + VMA+N   K CC LG++
Sbjct: 259 QDVMAVNTAQKQCCNLGEI 277


>ref|XP_003534408.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X1
           [Glycine max]
          Length = 303

 Score =  137 bits (345), Expect = 8e-30
 Identities = 98/259 (37%), Positives = 132/259 (50%), Gaps = 27/259 (10%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTN-DKKSSVRVAFGPG----HTTPTTTSQKSI------ 359
           +ED+E    LSR R +  +++    ++KSSV VAF  G    H+  T  + KSI      
Sbjct: 35  NEDSEVPRALSRRRHENPAKREPKVERKSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSS 94

Query: 360 ------LINE-----SDETMKDALXXXXXXXXXXXX-PWNYDGTYYPTTLPIRRPYSGNP 503
                   NE     + E   DA              PW+Y+ +YYPTTLP+R+P SG+P
Sbjct: 95  GSPSKYFANEQIRSIATEDQNDASNASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDP 154

Query: 504 GILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSHFK 683
            ILDE EFGEAA + EY+E  +N+AAEL                               K
Sbjct: 155 EILDEKEFGEAATSVEYDENTVNSAAELEILESEEQRMFFFQIPTPLPMD-----KQSNK 209

Query: 684 GKEPIGQ---AARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLHDVYPGTGNAC- 851
           GKE IG    +  A++  +   +LP G +GK++VY SGAIKLKLGETL DV PG+   C 
Sbjct: 210 GKEKIGTSTVSGEATKSKNALEELPRGYMGKMLVYKSGAIKLKLGETLLDVSPGSNCRCV 269

Query: 852 EHVMAMNYGTKDCCLLGQV 908
           + VMA+N   K CC LG++
Sbjct: 270 QDVMAVNTAQKQCCNLGEI 288


>gb|ACU24406.1| unknown [Glycine max]
          Length = 303

 Score =  137 bits (345), Expect = 8e-30
 Identities = 98/259 (37%), Positives = 132/259 (50%), Gaps = 27/259 (10%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTN-DKKSSVRVAFGPG----HTTPTTTSQKSI------ 359
           +ED+E    LSR R +  +++    ++KSSV VAF  G    H+  T  + KSI      
Sbjct: 35  NEDSEVPRALSRRRHENPAKREPKVERKSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSS 94

Query: 360 ------LINE-----SDETMKDALXXXXXXXXXXXX-PWNYDGTYYPTTLPIRRPYSGNP 503
                   NE     + E   DA              PW+Y+ +YYPTTLP+R+P SG+P
Sbjct: 95  GSPSKYFANEQIRSIATEDQNDASNASARRIKREYREPWDYENSYYPTTLPLRKPNSGDP 154

Query: 504 GILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSHFK 683
            ILDE EFGEAA + EY+E  +N+AAEL                               K
Sbjct: 155 EILDEKEFGEAATSVEYDENTVNSAAELEILESEEQRMFFFQIPTPLPMD-----KQSNK 209

Query: 684 GKEPIGQ---AARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLHDVYPGTGNAC- 851
           GKE IG    +  A++  +   +LP G +GK++VY SGAIKLKLGETL DV PG+   C 
Sbjct: 210 GKEKIGTSTVSGEATKSKNALEELPRGYMGKMLVYKSGAIKLKLGETLLDVSPGSNCRCV 269

Query: 852 EHVMAMNYGTKDCCLLGQV 908
           + VMA+N   K CC LG++
Sbjct: 270 QDVMAVNTAQKQCCNLGEI 288


>ref|XP_006591962.1| PREDICTED: uncharacterized protein LOC100787575 [Glycine max]
          Length = 345

 Score =  134 bits (337), Expect = 7e-29
 Identities = 92/270 (34%), Positives = 131/270 (48%), Gaps = 39/270 (14%)
 Frame = +3

Query: 216 EDTESELLLSRFRKKLQSQQHTNDKKSSVRVAFGPG------------------------ 323
           ED+     LSR ++    ++   + KSSV VAF  G                        
Sbjct: 68  EDSAVPRALSRRQENPTKREPKVETKSSVEVAFSLGSSSHSLRTYGISKSVDSGSPSKYF 127

Query: 324 --------HTTPTTTSQK---SILINESDETMKDALXXXXXXXXXXXXPWNYDGTYYPTT 470
                   H++  T  Q     I + + D+   DA             PW+Y+ +YYPTT
Sbjct: 128 ANEQIRSRHSSVATEDQNYACMIEVTDDDDDTTDA--SARKIKREYKEPWDYENSYYPTT 185

Query: 471 LPIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXX 650
           LP+R+P SG+P ILDE EFGEAA + EY+E  +N+AAELG                    
Sbjct: 186 LPLRKPNSGDPEILDEKEFGEAASSAEYDENTVNSAAELG-----LLKKSQQQRMLFFKF 240

Query: 651 XXXXXVSSHFKGKEPIGQAA---RASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLH 821
                V    KGKE IG++     A++  S   +LP G +GK++VY SGAIKLKLGET+ 
Sbjct: 241 PTLPLVKQTNKGKEKIGKSTVSQEATKSKSALEELPRGYMGKMLVYKSGAIKLKLGETMF 300

Query: 822 DVYPGTGN-ACEHVMAMNYGTKDCCLLGQV 908
           DV PG+ + + + ++A+N   K CC LG++
Sbjct: 301 DVSPGSNSVSVQDIVAVNTAQKQCCNLGEL 330


>gb|EOY22841.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
          Length = 328

 Score =  134 bits (336), Expect = 9e-29
 Identities = 103/308 (33%), Positives = 143/308 (46%), Gaps = 40/308 (12%)
 Frame = +3

Query: 105 MDQKNPSSSSTRKLXXXXXXXXXXXXXXXXXXXSGADEDTES---ELLLSRFRKKLQSQQ 275
           MDQ  PSS   +                        DED E+   + LL RF +    Q+
Sbjct: 1   MDQDGPSSGRRKVRFAPKAPQSSRRLKTTVSKSEVNDEDGEAAQAQYLLGRFNENQTRQR 60

Query: 276 HTNDKKSSVRVAFGPGHTTP-----------------TTTSQKSILINE----------- 371
              +KKSS +++FGPG  +                  T + Q+S   N+           
Sbjct: 61  PKVEKKSSAQISFGPGAPSSNLLRAYGSQRGGTSGKSTDSRQRSPDDNDGQIIGSFPSAS 120

Query: 372 ----SDETMKDALXXXXXXXXXXXX-PWNYDGTYYPTTLPIRRPYSGNPGILDEAEFGEA 536
               +D    DA+             PW+Y  TYYP TLP+RRPYSG+P +LD+AEF EA
Sbjct: 121 KEDRTDICSSDAIEASAPKIKREYREPWDYHHTYYPITLPLRRPYSGDPELLDQAEFVEA 180

Query: 537 ARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSHFKGK-EPIGQAAR 713
           AR KEY+EK IN A++LG                          S+  K K E +G + R
Sbjct: 181 AR-KEYDEKTINPASDLGLLEEGEKGKMFFFQLPANLPVIKRLASTKGKEKAENLGSSER 239

Query: 714 --ASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLHDVYPGTGNA-CEHVMAMNYGTK 884
             A +K     +LP G +GK++VY SGA+KLKLGETL+DV PG+     + V A+N   K
Sbjct: 240 FGALKKGCQLEELPGGFMGKMLVYKSGAVKLKLGETLYDVSPGSDCIFAQDVAAVNTTEK 299

Query: 885 DCCLLGQV 908
            CC++G++
Sbjct: 300 HCCVIGEL 307


>ref|XP_004240014.1| PREDICTED: uncharacterized protein LOC101254492 [Solanum
            lycopersicum]
          Length = 373

 Score =  130 bits (326), Expect = 1e-27
 Identities = 108/360 (30%), Positives = 150/360 (41%), Gaps = 88/360 (24%)
 Frame = +3

Query: 105  MDQKNP-SSSSTRKLXXXXXXXXXXXXXXXXXXXSGAD-----EDTES-ELLLSRFRKKL 263
            MD   P SSSSTRK+                   + AD     +D E+ E +L +  ++L
Sbjct: 1    MDPDLPLSSSSTRKVKFAPKGPPRRKKQNPAQPKNEADGNEDRDDNEAAEAVLRKVNERL 60

Query: 264  QSQQHTNDKKSSVRVAFGPGHTTPTTTS----QKSILINESDETMKDA------------ 395
              Q+   +KK++V VAF  G  +PT+T      + + +N+ D T+KD             
Sbjct: 61   TRQKPKTEKKAAVEVAFAHGVASPTSTKTSGKSRELTVNQ-DSTLKDNESCDNMDIDSLP 119

Query: 396  -----------------LXXXXXXXXXXXXPWNYDGTYYPTTLPIRRPYSGNPGILDEAE 524
                                          PW+Y  + YP TLP+RRPY+G+P IL+EAE
Sbjct: 120  TLPSSTGPDLAEMSVNNSDSLLKRKKEYKEPWDYHHSNYPVTLPLRRPYAGDPEILNEAE 179

Query: 525  FGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSS---------- 674
            FGEAA+N EY+E NIN A+ELG                          S+          
Sbjct: 180  FGEAAKNAEYDENNINPASELGLLEKKDDVQLLFLQLPANLPLSKLQASTGGRDTAVSLT 239

Query: 675  ---------------HFKGKEPIGQAAR----------------------ASQKCSGWGD 743
                             KGKE  G A R                       + K     +
Sbjct: 240  LPGDKSDKAATLSSPMLKGKEVAGSAPRFLASAKGKEISDSSTISRRHNNTTNKVCSLQE 299

Query: 744  LPAGRIGKLIVYSSGAIKLKLGETLHDVYPGTG-NACEHVMAMNYGTKDCCLLGQVENHA 920
            LPAG +GK++VY SGAIKLKLG+ L+DV PG   +  + V+A+N   K CC LG++   A
Sbjct: 300  LPAGSMGKMLVYKSGAIKLKLGDILYDVSPGVECSFSQDVVAINTAEKQCCQLGELGKRA 359


>ref|XP_004167167.1| PREDICTED: uncharacterized protein LOC101227599 [Cucumis sativus]
          Length = 322

 Score =  128 bits (322), Expect = 4e-27
 Identities = 91/271 (33%), Positives = 132/271 (48%), Gaps = 37/271 (13%)
 Frame = +3

Query: 213 DEDTE-----SELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTTT----------- 344
           DED E     +  LL R  + L  + +  +KKSSV+VAFGPG  + +++           
Sbjct: 35  DEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVEN 94

Query: 345 -SQKSILINESDETMKDALXXXXXXXXXXXX---------------PWNYDGTYYPTTLP 476
            S+K+ +  E DE  +  L                           PW+Y  +YYPTTLP
Sbjct: 95  GSRKNDIEPEVDEDEEFVLPVARDANEDGKYFDKKPKMETKRDYKEPWDYQNSYYPTTLP 154

Query: 477 IRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXX 656
           +R PYSG+P +LDEAEFG+   N+EY+E ++  A +LG                      
Sbjct: 155 LRMPYSGDPELLDEAEFGQDVMNREYDENSVIPALDLGLLDENTESTKYFFQLPARLPLP 214

Query: 657 XXXVSSHFKGKEPIGQAARASQKCSGWGD----LPAGRIGKLIVYSSGAIKLKLGETLHD 824
               SS   GKE +G +  ++   S   D    L AG +GKL++Y SGAIKL+LG+ L+D
Sbjct: 215 KQ--SSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSGAIKLRLGDILYD 272

Query: 825 VYPGTG-NACEHVMAMNYGTKDCCLLGQVEN 914
           V  G+  +  +HV+A+N     CC LG + N
Sbjct: 273 VSSGSNCSFLQHVVAINTEEGQCCDLGDIGN 303


>ref|XP_002326279.1| predicted protein [Populus trichocarpa]
           gi|566176433|ref|XP_006381642.1| DNA-directed RNA
           polymerase 3 RPC4 family protein [Populus trichocarpa]
           gi|550336350|gb|ERP59439.1| DNA-directed RNA polymerase
           3 RPC4 family protein [Populus trichocarpa]
          Length = 292

 Score =  125 bits (315), Expect = 2e-26
 Identities = 77/230 (33%), Positives = 113/230 (49%), Gaps = 5/230 (2%)
 Frame = +3

Query: 237 LLSRFRKKLQSQQHTNDKK-SSVRVAFGPGHTTPTTTSQKSILINESDETMKDALXXXXX 413
           L+ +F+++   Q+ TN+KK   + +AFGPG          S +  +   +          
Sbjct: 45  LMKQFQERSLKQKITNEKKVQKLDIAFGPGAAATKPFPSWSTINRDQGSSSNGNADAPGP 104

Query: 414 XXXXXXXPWNYDGTYYPTTLPIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGX 593
                  PW+Y   Y P +LP+RRPYSGN  ILDE EFGE +    Y+E + N+A ELG 
Sbjct: 105 REKEYIEPWDYYSNY-PVSLPMRRPYSGNSAILDEEEFGEVSEAATYDENSTNSAVELGL 163

Query: 594 XXXXXXXXXXXXXXXXXXXXXXXX---VSSHFKGKEPIGQAARASQKCSGWGDLPAGRIG 764
                                      V    K        ARA +K     +LPAG +G
Sbjct: 164 MEENVEASMLFVQLPPTMPMIKRSATAVGPEVKESSRPSGGARAIEKTCRLDELPAGYMG 223

Query: 765 KLIVYSSGAIKLKLGETLHDVYPGTGNA-CEHVMAMNYGTKDCCLLGQVE 911
           K++VY SGA+KLKLG+TL+DV PG  +   + V+A+N G + CC++ ++E
Sbjct: 224 KVLVYRSGAVKLKLGDTLYDVSPGMNSIFAQDVVAINRGEETCCVVAEIE 273


>ref|XP_004514516.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
           isoform X2 [Cicer arietinum]
          Length = 315

 Score =  125 bits (313), Expect = 4e-26
 Identities = 94/276 (34%), Positives = 135/276 (48%), Gaps = 41/276 (14%)
 Frame = +3

Query: 207 GADEDTESELLLSRFRKKLQS----QQHTNDKKSSVRVAFGP-GHTTP-----------T 338
           GADE    E      R  L++    ++   +K+SS++VAFGP G ++P           T
Sbjct: 34  GADEQNSVETQARVHRLNLEAPVARRETKVEKQSSLQVAFGPKGSSSPSLKTFSSGNSKT 93

Query: 339 TTSQKSILINE----------------------SDETMKDALXXXXXXXXXXXXPWNYDG 452
           + S+  I  NE                      +D+   D+             PW+ + 
Sbjct: 94  SGSKSKISANEKNGSTHYSTAIVDQSNTCVIDVADDDTTDS--SDGKIKKDYKDPWDLNS 151

Query: 453 TYYPTTLPIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXX 632
            Y P TLP+R+PYSG+P IL+E EFGEAA N EY++K +++A ELG              
Sbjct: 152 NY-PITLPLRKPYSGDPEILNEIEFGEAATNVEYDDKTLDSAKELG--------LLDSNE 202

Query: 633 XXXXXXXXXXXVSSHFKGKEPIG--QAARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKL 806
                      V    KG+E  G  + A  ++K +   +LP G +GK++VY SGA+K+KL
Sbjct: 203 QHRMLFFKLPVVLPFIKGEEKSGTSKVAANTKKGTNLLELPGGYMGKMLVYKSGAVKIKL 262

Query: 807 GETLHDVYPGTGNAC-EHVMAMNYGTKDCCLLGQVE 911
           GETL DV PGT + C + V+AMN   K CC LG V+
Sbjct: 263 GETLFDVSPGTKSICAQDVIAMNTAQKHCCNLGTVD 298


>ref|XP_004514515.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
           isoform X1 [Cicer arietinum]
          Length = 316

 Score =  125 bits (313), Expect = 4e-26
 Identities = 94/276 (34%), Positives = 135/276 (48%), Gaps = 41/276 (14%)
 Frame = +3

Query: 207 GADEDTESELLLSRFRKKLQS----QQHTNDKKSSVRVAFGP-GHTTP-----------T 338
           GADE    E      R  L++    ++   +K+SS++VAFGP G ++P           T
Sbjct: 34  GADEQNSVETQARVHRLNLEAPVARRETKVEKQSSLQVAFGPKGSSSPSLKTFSSGNSKT 93

Query: 339 TTSQKSILINE----------------------SDETMKDALXXXXXXXXXXXXPWNYDG 452
           + S+  I  NE                      +D+   D+             PW+ + 
Sbjct: 94  SGSKSKISANEKNGSTHYSTAIVDQSNTCVIDVADDDTTDS--SDGKIKKDYKDPWDLNS 151

Query: 453 TYYPTTLPIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXX 632
            Y P TLP+R+PYSG+P IL+E EFGEAA N EY++K +++A ELG              
Sbjct: 152 NY-PITLPLRKPYSGDPEILNEIEFGEAATNVEYDDKTLDSAKELG-------LLQDSNE 203

Query: 633 XXXXXXXXXXXVSSHFKGKEPIG--QAARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKL 806
                      V    KG+E  G  + A  ++K +   +LP G +GK++VY SGA+K+KL
Sbjct: 204 QHRMLFFKLPVVLPFIKGEEKSGTSKVAANTKKGTNLLELPGGYMGKMLVYKSGAVKIKL 263

Query: 807 GETLHDVYPGTGNAC-EHVMAMNYGTKDCCLLGQVE 911
           GETL DV PGT + C + V+AMN   K CC LG V+
Sbjct: 264 GETLFDVSPGTKSICAQDVIAMNTAQKHCCNLGTVD 299


>ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600766 [Solanum tuberosum]
          Length = 283

 Score =  124 bits (311), Expect = 7e-26
 Identities = 82/235 (34%), Positives = 119/235 (50%), Gaps = 2/235 (0%)
 Frame = +3

Query: 210 ADEDT-ESELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTTTSQKSILINESDETM 386
           AD D  ++E L+ RF +     +H  +KK   +VAFG G ++ +  S      N+   +M
Sbjct: 38  ADGDAAKAEELMQRFNEASAKVKHKVEKKGPTQVAFGYGGSSSSLKSYGHY--NKVSGSM 95

Query: 387 KDALXXXXXXXXXXXXPWNYDGTYYPTTLPIRRPYSGNPGILDEAEFGEAARNKEYNEKN 566
            D              PW+Y  T YP TLP+RRPYSGNP +LDE EFGEA+R+  Y+E +
Sbjct: 96  SDGGIGGERVQKEYTEPWDYY-TNYPVTLPVRRPYSGNPELLDEEEFGEASRSLTYDENS 154

Query: 567 INAAAELGXXXXXXXXXXXXXXXXXXXXXXXXXVSSHFKGKEPIGQAARASQKCSGWGDL 746
           I  A +LG                          S   +G E    +  +  K     +L
Sbjct: 155 IKPAMDLGLMEESLEEKMFLVQLPTMPMLKQ---SIKTEGSEMANSSKPSKAKACSLNEL 211

Query: 747 PAGRIGKLIVYSSGAIKLKLGETLHDVYPGTG-NACEHVMAMNYGTKDCCLLGQV 908
           PAG +GK++VY SGA+KLKLGETL ++ PG   +  + V+A+N   K C  +G++
Sbjct: 212 PAGFMGKMLVYKSGAVKLKLGETLFNLSPGMDCSFAQDVVAVNTEEKYCSNIGEL 266


>ref|XP_004146914.1| PREDICTED: uncharacterized protein LOC101207602 [Cucumis sativus]
          Length = 334

 Score =  123 bits (308), Expect = 2e-25
 Identities = 91/283 (32%), Positives = 131/283 (46%), Gaps = 49/283 (17%)
 Frame = +3

Query: 213 DEDTE-----SELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTTT----------- 344
           DED E     +  LL R  + L  + +  +KKSSV+VAFGPG  + +++           
Sbjct: 35  DEDGEGYVAQTRYLLRRANENLGKRANKVEKKSSVQVAFGPGAESTSSSIRTYGVPKVEN 94

Query: 345 -SQKSILINESDE---------------------------TMKDALXXXXXXXXXXXXPW 440
            S+K+ +  E DE                           T   +             PW
Sbjct: 95  GSRKNDIEPEVDEDEEFVLPVARDVNEDGKYFDKKTKDGITESSSSAMETKTKRDYKEPW 154

Query: 441 NYDGTYYPTTLPIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXX 620
           +Y  +YYPTTLP+R PYSG+P  LDEAEFG+   N+EY+E ++  A +LG          
Sbjct: 155 DYQNSYYPTTLPLRMPYSGDPERLDEAEFGQDVMNREYDENSVIPALDLGLLDENTESTK 214

Query: 621 XXXXXXXXXXXXXXXVSSHFKGKEPIGQAARASQKCSGWGD----LPAGRIGKLIVYSSG 788
                           SS   GKE +G +  ++   S   D    L AG +GKL++Y SG
Sbjct: 215 YFFQLPARLPLPKQ--SSTATGKEKVGNSRSSNSTSSSDLDDLKKLSAGCMGKLLIYKSG 272

Query: 789 AIKLKLGETLHDVYPGTG-NACEHVMAMNYGTKDCCLLGQVEN 914
           AIKL+LG+ L+DV  G+  +  +HV+A+N     CC LG + N
Sbjct: 273 AIKLRLGDILYDVSSGSNCSFLQHVVAINTEEGQCCDLGDIGN 315


>gb|ESW03348.1| hypothetical protein PHAVU_011G006800g [Phaseolus vulgaris]
          Length = 318

 Score =  122 bits (305), Expect = 3e-25
 Identities = 95/277 (34%), Positives = 126/277 (45%), Gaps = 42/277 (15%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTT----------------- 341
           DED+    LLSR  +    ++   + KSSV VAF PG ++ +                  
Sbjct: 34  DEDSAPARLLSRRYENSARREPKVETKSSVEVAFSPGVSSTSLRTYGTSKAVDNGTNSGS 93

Query: 342 ------------------------TSQKSILINESDETMKDALXXXXXXXXXXXXPWNYD 449
                                   TS   +  N ++ET +               PW+Y 
Sbjct: 94  PSKSFAKEQIRSRRSSAATGDQNDTSTIDVTDNTTNETARKI-------KREYKEPWDYT 146

Query: 450 GTYYPTTLPIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXX 629
            +YYP TLP+R+P SGNP ILDE EFGEAA + +Y+E  +N+AAEL              
Sbjct: 147 NSYYPITLPLRKPNSGNPEILDEEEFGEAATSSKYDENAVNSAAEL---KLLEKSEQHKM 203

Query: 630 XXXXXXXXXXXXVSSHFKGKEPIGQAARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLG 809
                       V S+ K K  IG A   S K     +LP+G +GK+ +Y SGAIKLKLG
Sbjct: 204 FLFQFPKNFPFNVGSN-KEKGQIG-ATTVSGKAGALEELPSGYMGKMQIYKSGAIKLKLG 261

Query: 810 ETLHDVYPGTG-NACEHVMAMNYGTKDCCLLGQVENH 917
           ETL DV PGT     + V+A+N   K  C LG+V NH
Sbjct: 262 ETLFDVSPGTKCGFSQDVVAVNIAQKQICNLGEV-NH 297


>ref|XP_006490148.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           [Citrus sinensis]
          Length = 324

 Score =  120 bits (302), Expect = 8e-25
 Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 38/274 (13%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTT----------------- 341
           D + E++ LL +F +    ++   +KKSS +VAFG G ++  +                 
Sbjct: 45  DPEAEAQRLLRQFNEANARRRPKVEKKSS-QVAFGAGDSSSPSIKSFGPRREVSSAKGTE 103

Query: 342 ------TSQKSILINESDETMKDA--------LXXXXXXXXXXXXPWNYDGTYYPTTLPI 479
                 TS +  ++N S  T ++                      PWNYD TYYPTTLP 
Sbjct: 104 SEIIDSTSDERQIVNFSPVTAREDRSAPISSDASSTQKIKEDYKEPWNYD-TYYPTTLPW 162

Query: 480 RRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXX 659
           R+P SG+P +LD+ EFGE  RN EY+E ++N+AA+LG                       
Sbjct: 163 RKPNSGDPEVLDQEEFGENTRNSEYDENSVNSAADLGLLDESENRKLFFFQLPKKLPLDK 222

Query: 660 XXVSSHFKGKE------PIGQAARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLH 821
              S+  KGKE      P+G+    + K      LP G +GK++VY SGA+K KLG+TL 
Sbjct: 223 RPAST--KGKEKAESSKPLGRT--DAPKDLDLSKLPGGYMGKMLVYKSGAVKFKLGDTLF 278

Query: 822 DVYPGTG-NACEHVMAMNYGTKDCCLLGQVENHA 920
           DV  G+  +  + ++ M+   K CC+LGQ++  A
Sbjct: 279 DVSAGSDCSFAQDLVVMDVKDKTCCVLGQLDKLA 312


>ref|XP_006421620.1| hypothetical protein CICLE_v10005426mg [Citrus clementina]
           gi|557523493|gb|ESR34860.1| hypothetical protein
           CICLE_v10005426mg [Citrus clementina]
          Length = 324

 Score =  119 bits (299), Expect = 2e-24
 Identities = 87/274 (31%), Positives = 132/274 (48%), Gaps = 38/274 (13%)
 Frame = +3

Query: 213 DEDTESELLLSRFRKKLQSQQHTNDKKSSVRVAFGPGHTTPTT----------------- 341
           D + E++ LL +F +    ++   +KKSS +VAFG G ++  +                 
Sbjct: 45  DPEAEAQRLLRQFNEANARRRPKVEKKSS-QVAFGAGDSSSPSIKSFGPRREVSSAKGTE 103

Query: 342 ------TSQKSILINESDETMKDA--------LXXXXXXXXXXXXPWNYDGTYYPTTLPI 479
                 TS +  ++N S  T ++                      PWNYD TYYPTTLP 
Sbjct: 104 SEIIDSTSDERQIVNFSPATAREDRSAPISSDASSTQKIKEDYKEPWNYD-TYYPTTLPW 162

Query: 480 RRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXXXXXXXXXXXXXXX 659
           R+P SG+P +LD+ EFGE  RN EY+E ++N+AA+LG                       
Sbjct: 163 RKPNSGDPEVLDQEEFGENTRNSEYDENSVNSAADLGLLDESENRKLFFFQLPKKLPLDK 222

Query: 660 XXVSSHFKGKE------PIGQAARASQKCSGWGDLPAGRIGKLIVYSSGAIKLKLGETLH 821
              S+  KGKE      P+G+    + K      LP G +GK++VY SGA+K KLG+TL 
Sbjct: 223 RPAST--KGKEKAESSKPLGRT--DAPKDLDLSKLPGGYMGKMLVYKSGAVKFKLGDTLF 278

Query: 822 DVYPGTG-NACEHVMAMNYGTKDCCLLGQVENHA 920
           DV  G+  +  + ++ ++   K CC+LGQ++  A
Sbjct: 279 DVSAGSDCSFAQDLVVIDVKDKTCCVLGQLDKLA 312


>gb|EOY22840.1| DNA binding protein, putative isoform 1 [Theobroma cacao]
          Length = 359

 Score =  118 bits (296), Expect = 4e-24
 Identities = 71/160 (44%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
 Frame = +3

Query: 441 NYDGTYYPTTLPIRRPYSGNPGILDEAEFGEAARNKEYNEKNINAAAELGXXXXXXXXXX 620
           +Y  TYYP TLP+RRPYSG+P +LD+AEF EAAR KEY+EK IN A++LG          
Sbjct: 180 DYHHTYYPITLPLRRPYSGDPELLDQAEFVEAAR-KEYDEKTINPASDLGLLEEGEKGKM 238

Query: 621 XXXXXXXXXXXXXXXVSSHFKGK-EPIGQAAR--ASQKCSGWGDLPAGRIGKLIVYSSGA 791
                           S+  K K E +G + R  A +K     +LP G +GK++VY SGA
Sbjct: 239 FFFQLPANLPVIKRLASTKGKEKAENLGSSERFGALKKGCQLEELPGGFMGKMLVYKSGA 298

Query: 792 IKLKLGETLHDVYPGTGNA-CEHVMAMNYGTKDCCLLGQV 908
           +KLKLGETL+DV PG+     + V A+N   K CC++G++
Sbjct: 299 VKLKLGETLYDVSPGSDCIFAQDVAAVNTTEKHCCVIGEL 338