BLASTX nr result
ID: Rheum21_contig00006248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00006248
(533 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 139 3e-31
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 139 3e-31
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 135 4e-30
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 135 7e-30
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 130 1e-28
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 127 1e-27
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 125 8e-27
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 124 1e-26
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 123 3e-26
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 122 5e-26
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A... 121 9e-26
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 121 1e-25
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 121 1e-25
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 121 1e-25
ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein A... 120 1e-25
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 120 1e-25
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 120 2e-25
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 120 2e-25
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 119 3e-25
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 119 4e-25
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 139 bits (351), Expect = 3e-31
Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F + SG K N+ K+ + GL+ +E+ + G+ GTFPIRYLG PL RKLR+ DY
Sbjct: 582 FADWSGLKVNKDKSQLFQAGLDLSERITSAAY-GFPAGTFPIRYLGLPLMCRKLRIADYG 640
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL KL ++S ++K +S+AGR Q++ SVI G++ FWM + LLP I +IE +C FL
Sbjct: 641 PLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFL 700
Query: 172 WSGQISGNR-NLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
W+G I G + + V+W + C GGL F+ WNK ++W W
Sbjct: 701 WAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQW 758
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 139 bits (351), Expect = 3e-31
Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F + SG K N+ K+ + GL+ +E+ + G+ GTFPIRYLG PL RKLR+ DY
Sbjct: 582 FADWSGLKVNKDKSQLFQAGLDLSERITSAAY-GFPAGTFPIRYLGLPLMCRKLRIADYG 640
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL KL ++S ++K +S+AGR Q++ SVI G++ FWM + LLP I +IE +C FL
Sbjct: 641 PLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFL 700
Query: 172 WSGQISGNR-NLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
W+G I G + + V+W + C GGL F+ WNK ++W W
Sbjct: 701 WAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQW 758
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 135 bits (341), Expect = 4e-30
Identities = 67/178 (37%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F + SG +AN K+S++ GG++ + + + LGYTI P +YLG PL S+KL +
Sbjct: 521 FSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWY 580
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL K+ I S AK++SYAGRAQ+V++V+ G+ W Q ++P K+I IEG+CR++L
Sbjct: 581 PLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYL 640
Query: 172 WSG-QISGNRNLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WSG + L+AW VC GGL L WN++ + +W W
Sbjct: 641 WSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTKLCWDLANKEDKLWIKW 698
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 135 bits (339), Expect = 7e-30
Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F SG K N+ K+ ++ GL E N + G+ IGT PIRYLG PL +RKLR+ +Y
Sbjct: 722 FASWSGLKVNKDKSHLYLAGLNQLESN-ANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYE 780
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL K+ +S + K +S+AGR Q++ SVI G + FWM + LLP I +IE +C FL
Sbjct: 781 PLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFL 840
Query: 172 WSGQISGNRNL-VAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WSG I + + V+W +C GGL + L+ WNK K ++W W
Sbjct: 841 WSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADW 898
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 130 bits (328), Expect = 1e-28
Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F + +G + N AK V GGL I G+ GT P+RYLG PL +KL V Y+
Sbjct: 202 FSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYL 261
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL K+ I+ +K +S AGR Q+VRS+I I +WM +P K+I +I+ ICR+F+
Sbjct: 262 PLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFI 321
Query: 172 WSGQISGNR-NLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WSG R +LVAWK VC GGLN L WN + N+W W
Sbjct: 322 WSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSKEDNLWVKW 379
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 127 bits (320), Expect = 1e-27
Identities = 64/178 (35%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F S KAN +++ + G++ + L + +++GT P+RYLG PL + KLR+ D
Sbjct: 550 FESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCS 609
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL ++++ I+S K +S+AGR Q+++SV+ I +W L+LP K++ IE R FL
Sbjct: 610 PLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFL 669
Query: 172 WSGQISGN-RNLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
W+G SG VAW +C GGL K+L WNKA N WT W
Sbjct: 670 WAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIWNLVSSSSNFWTDW 727
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 125 bits (313), Expect = 8e-27
Identities = 62/178 (34%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F + +G N K S+ G++ K E L + G+ G P +YLG P+ S+KL Y
Sbjct: 99 FSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYS 158
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL +K+ I+ A+ +SYAGR Q+V SV+ + +W+ P ++ +IE ICR FL
Sbjct: 159 PLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFL 218
Query: 172 WSGQISGNR-NLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
W+G G+R + VAWK +C GGLN ++ WNKA + ++W W
Sbjct: 219 WTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKW 276
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 124 bits (312), Expect = 1e-26
Identities = 62/178 (34%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F +G N K ++FGG++ KN+ I Y G P+RYLG PL S+KL + Y+
Sbjct: 541 FSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVRYLGVPLTSKKLNIKYYL 600
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL +K+ I+ +K ++ GR Q+V I I+ FWMQ L +P+ +I +I+ +CR+F+
Sbjct: 601 PLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFV 660
Query: 172 WSGQISGNR-NLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WS R + +AW +VC +GGLN L WN N+W W
Sbjct: 661 WSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKW 718
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 123 bits (308), Expect = 3e-26
Identities = 64/178 (35%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F SG + N K++V+ GLED +K + L+ G+ GTFP RYLG PL RKLR DY
Sbjct: 721 FKNLSGLEMNTEKSAVYTAGLEDTDKEDTLAF-GFVNGTFPFRYLGLPLLHRKLRRSDYS 779
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
L +K+ K +S+AGR Q++ SVI + FW+ S +LP + IE +C FL
Sbjct: 780 QLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFL 839
Query: 172 WSGQISGNRNL-VAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
W I+ ++ V+W+N C GGL + +WNK + ++W W
Sbjct: 840 WGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAW 897
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 122 bits (306), Expect = 5e-26
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F + SG + + K++V+F GL E ++ + +GT P+RYLG PL +++L DY+
Sbjct: 110 FAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYL 169
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL +K I S A+ +SYAGR ++ SV+ I FWM + LP + I +I+ +C A+L
Sbjct: 170 PLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSAYL 229
Query: 172 WS-GQISGNRNLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WS G ++ ++ +AW +VC D GGL + L N ++W W
Sbjct: 230 WSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHADSLWVKW 287
>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 239
Score = 121 bits (304), Expect = 9e-26
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F SG N K++++ G+ E + + G+ +G FP RYLG PL S +L VC Y
Sbjct: 51 FCRVSGLSINSDKSAIYSAGIRPHELSHIQQLTGFNLGGFPFRYLGVPLLSSRLNVCHYA 110
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL +K+ IQ K +SYAG+ +++R+VI+GI+ FWM+ L ++ +I C FL
Sbjct: 111 PLLSKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWMKIFPLSQSVLDRINASCCNFL 170
Query: 172 W-SGQISGNRNLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
W I N++L+AW VC GGL L WN K +W W
Sbjct: 171 WGKADIGKNKSLIAWSVVCSPKKEGGLGLFNLKDWNLTLLSRILWDFHCKKDFLWVRW 228
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 121 bits (303), Expect = 1e-25
Identities = 63/179 (35%), Positives = 100/179 (55%), Gaps = 2/179 (1%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSI-LGYTIGTFPIRYLGTPLHSRKLRVCDY 356
F + SG N KT++ G + E+N ++ LG + G+ P+RYLG PL S+K++ DY
Sbjct: 269 FKKGSGLGINLQKTALLLDG-GNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDY 327
Query: 355 IPLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAF 176
PL +++ + S A+ +S+AGR Q+++SVI + FW +LP + +H++E +C AF
Sbjct: 328 QPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAF 387
Query: 175 LWSGQISGNRNL-VAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
LWSG + R ++W VC + GGL K L SWNK ++W +W
Sbjct: 388 LWSGAPNSAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKLIWLLFTASGSLWVSW 446
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 121 bits (303), Expect = 1e-25
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F +SG + K++++ G+ + +N LS + G P+RYLG PL ++++ DY
Sbjct: 301 FAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYS 360
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL +K+++ I S A+ +SYAGR ++ SVI + FWM + LP I +IE +C AFL
Sbjct: 361 PLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFL 420
Query: 172 WSG-QISGNRNLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WSG +++ + + W ++C GGL K L+ NK + ++W W
Sbjct: 421 WSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNW 478
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 121 bits (303), Expect = 1e-25
Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F SG + + K++++ G+ +++ + LS + G P+RYLG PL ++++ DY
Sbjct: 1025 FAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYS 1084
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL +K I S A+ +SYAGR ++ SVI I FWM + LP I +IE +C AFL
Sbjct: 1085 PLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFL 1144
Query: 172 WSGQI-SGNRNLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WSG + + + +AW ++C GGL K L NK + ++W TW
Sbjct: 1145 WSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTW 1202
>ref|XP_006586426.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 192
Score = 120 bits (302), Expect = 1e-25
Identities = 61/158 (38%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F SG + K++++ G+ E + + G+++G FP RYLG PL S +L VC Y
Sbjct: 8 FCRVSGLSISSDKSAIYSTGIRPHELSHIQQLTGFSLGDFPFRYLGVPLLSSRLNVCHYA 67
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
L +K+ IQ K +SYAG+ +++R+VI+GI+ FWM+ LP ++ I CR FL
Sbjct: 68 LLLSKITGLIQGWSKKSLSYAGKLELIRAVIQGIVNFWMEIFSLPQSVMDWINASCRNFL 127
Query: 172 W-SGQISGNRNLVAWKNVCCDFDRGGLNFKELMSWNKA 62
W I N+ LVAW VC GGL L WN A
Sbjct: 128 WGKADIGKNKPLVAWSVVCSPKKEGGLGLLNLKDWNLA 165
>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
sativus]
Length = 382
Score = 120 bits (302), Expect = 1e-25
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 1/170 (0%)
Frame = -2
Query: 508 ANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYIPLFNKLKN 329
AN AK+S+ G+ ++ + + +G++IG P+RYLG PL +L+ CD PL ++ +
Sbjct: 3 ANLAKSSIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITS 62
Query: 328 SIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFLWSGQISGN 149
I+S A+ +S+AGR Q+VRSV+ + +W +LP+K+ ++ I R++LW G+ G
Sbjct: 63 RIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGR 122
Query: 148 RNL-VAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
VAW VC FD GGL ++ SWN A ++W W
Sbjct: 123 GGAKVAWDEVCLPFDEGGLAIRDGSSWNIASTLKILWLLLVKSGSLWVAW 172
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 120 bits (301), Expect = 2e-25
Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F + SG N+ KT + G A LG T G+ P+RYLG PL S+K+R DY
Sbjct: 722 FRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQ 781
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL +++ + S A+ +S+AGR Q+++SVI + FW + P + + ++E +C AFL
Sbjct: 782 PLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCNAFL 841
Query: 172 WSGQISGNRNL-VAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WSG + R ++W VC + GGL K L SWN+ ++W +W
Sbjct: 842 WSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKLIWLLFTSAGSLWVSW 899
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 120 bits (300), Expect = 2e-25
Identities = 62/178 (34%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F SG N KT ++ GL +E + S G+ +G+ P+RYLG PL SRKL + +Y
Sbjct: 619 FAGWSGLLMNTNKTQLYHAGLSQSESDSMASY-GFKLGSLPVRYLGLPLMSRKLTIAEYA 677
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL K+ S + + +S+AGR Q++ SVI GI+ FW+ S +LP+ I +IE +C FL
Sbjct: 678 PLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSFILPLGCIKKIESLCSRFL 737
Query: 172 WSGQISGNR-NLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
WS +I VAW VC GG+ + N+ ++W W
Sbjct: 738 WSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLRMIWLLFSNSGSLWVAW 795
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 119 bits (299), Expect = 3e-25
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F SG + K++++ G+ E + + G+++G FP RYLG PL S +L VC Y
Sbjct: 84 FCRVSGLSISSDKSAIYSAGIRPYELSHIQQLTGFSLGGFPFRYLGAPLLSSRLNVCHYA 143
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
PL K+ IQ K +SY G+ +++++VI+GI+ FWM+ LP ++ +I C FL
Sbjct: 144 PLLYKIVGLIQGWNKKSLSYVGKLELIKAVIQGIMNFWMRIFPLPQSVLDRINASCCNFL 203
Query: 172 WS-GQISGNRNLVAWKNVCCDFDRGGLNFKELMSWNKA 62
WS I N+ LVAW VC GGL L WN A
Sbjct: 204 WSKADIGKNKPLVAWPVVCSPKQEGGLGLFNLKDWNLA 241
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 119 bits (298), Expect = 4e-25
Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 1/178 (0%)
Frame = -2
Query: 532 FGEESGFKANQAKTSVHFGGLEDAEKNECLSILGYTIGTFPIRYLGTPLHSRKLRVCDYI 353
F G N +K +++ G ++ K + L I G+ G P RYLG PL S+KL + Y
Sbjct: 541 FLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQ 600
Query: 352 PLFNKLKNSIQSNMAKRMSYAGRAQVVRSVIEGILTFWMQSLLLPIKMIHQIEGICRAFL 173
L +K+ I A +SYAGR Q+++SVI + FWMQ L LP +I +I ICR+FL
Sbjct: 601 VLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFL 660
Query: 172 WSGQIS-GNRNLVAWKNVCCDFDRGGLNFKELMSWNKAXXXXXXXXXXXXKVNIWTTW 2
W G + ++ +AW+ VC GGLN L WNK N+W W
Sbjct: 661 WIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLLWNVCNKSDNLWIKW 718