BLASTX nr result

ID: Rheum21_contig00006238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00006238
         (639 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241023.1| PREDICTED: uncharacterized protein LOC101253...    58   3e-06
ref|XP_006350667.1| PREDICTED: uncharacterized protein LOC102588...    57   6e-06
ref|XP_006378356.1| hypothetical protein POPTR_0010s08670g [Popu...    57   6e-06
ref|XP_002314647.2| hypothetical protein POPTR_0010s08670g [Popu...    57   6e-06
gb|ABK93119.1| unknown [Populus trichocarpa]                           57   6e-06
gb|EXB29871.1| hypothetical protein L484_016361 [Morus notabilis]      56   8e-06

>ref|XP_004241023.1| PREDICTED: uncharacterized protein LOC101253093 [Solanum
           lycopersicum]
          Length = 371

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
 Frame = -2

Query: 638 SPMPNFYQS--PPKLQVKKPAQTCAKSPKFGRRRSCSDADGLNNLRKDSQRGSCHSNITK 465
           +PMP+FY    PPK ++KKP  T AKSPKF RR+SC D  GL+       RGS H     
Sbjct: 255 NPMPSFYHEGPPPKAELKKPPPTRAKSPKFCRRKSCGDTGGLDKDVGAYDRGSQH----- 309

Query: 464 TTLTQNGNRTF--NCSEDRRGLSIQ 396
                N N TF    S+DR  L+ Q
Sbjct: 310 -IPGYNANTTFASRNSKDRLSLNNQ 333


>ref|XP_006350667.1| PREDICTED: uncharacterized protein LOC102588366 isoform X1 [Solanum
           tuberosum] gi|565368053|ref|XP_006350668.1| PREDICTED:
           uncharacterized protein LOC102588366 isoform X2 [Solanum
           tuberosum] gi|565368055|ref|XP_006350669.1| PREDICTED:
           uncharacterized protein LOC102588366 isoform X3 [Solanum
           tuberosum] gi|565368057|ref|XP_006350670.1| PREDICTED:
           uncharacterized protein LOC102588366 isoform X4 [Solanum
           tuberosum]
          Length = 369

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
 Frame = -2

Query: 638 SPMPNFYQS--PPKLQVKKPAQTCAKSPKFGRRRSCSDADGLNNLRKDSQRGSCH 480
           +PMP+FY    PPK ++KKP  T AKSPKF RR+SC D  GL+       RGS H
Sbjct: 255 NPMPSFYHEGPPPKAELKKPPPTRAKSPKFCRRKSCGDTGGLDKDVGAYDRGSQH 309


>ref|XP_006378356.1| hypothetical protein POPTR_0010s08670g [Populus trichocarpa]
           gi|566189818|ref|XP_006378357.1| hypothetical protein
           POPTR_0010s08670g [Populus trichocarpa]
           gi|550329389|gb|ERP56153.1| hypothetical protein
           POPTR_0010s08670g [Populus trichocarpa]
           gi|550329390|gb|ERP56154.1| hypothetical protein
           POPTR_0010s08670g [Populus trichocarpa]
          Length = 445

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = -2

Query: 638 SPMPNFYQS--PPKLQVKKPAQTCAKSPKFGRRRSCSDADGLNNLRKDSQRGSC 483
           SPMP+FY    PPK+++KK   T AKSPK GRR+SCS  +G+N+ + D  +G+C
Sbjct: 342 SPMPSFYHEGPPPKVELKKLPPTRAKSPKLGRRKSCS--NGVNSSQPDRVKGAC 393


>ref|XP_002314647.2| hypothetical protein POPTR_0010s08670g [Populus trichocarpa]
           gi|550329388|gb|EEF00818.2| hypothetical protein
           POPTR_0010s08670g [Populus trichocarpa]
          Length = 456

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = -2

Query: 638 SPMPNFYQS--PPKLQVKKPAQTCAKSPKFGRRRSCSDADGLNNLRKDSQRGSC 483
           SPMP+FY    PPK+++KK   T AKSPK GRR+SCS  +G+N+ + D  +G+C
Sbjct: 342 SPMPSFYHEGPPPKVELKKLPPTRAKSPKLGRRKSCS--NGVNSSQPDRVKGAC 393


>gb|ABK93119.1| unknown [Populus trichocarpa]
          Length = 404

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = -2

Query: 638 SPMPNFYQS--PPKLQVKKPAQTCAKSPKFGRRRSCSDADGLNNLRKDSQRGSC 483
           SPMP+FY    PPK+++KK   T AKSPK GRR+SCS  +G+N+ + D  +G+C
Sbjct: 290 SPMPSFYHEGPPPKVELKKLPPTRAKSPKLGRRKSCS--NGVNSSQPDRVKGAC 341


>gb|EXB29871.1| hypothetical protein L484_016361 [Morus notabilis]
          Length = 403

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
 Frame = -2

Query: 638 SPMPNFYQS--PPKLQVKKPAQTCAKSPKFGRRRSCSDADGLNNLRKDSQRGSCHS 477
           +PMP+FY    PPK+++KK   T AKSPK GRR+SCSD   ++ ++  S+RG+ HS
Sbjct: 292 NPMPSFYHEGPPPKIELKKLPPTRAKSPKLGRRKSCSDT--VDKVKGKSERGNRHS 345


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