BLASTX nr result

ID: Rheum21_contig00005412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005412
         (370 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30150.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    60   2e-07
ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    58   1e-06
ref|XP_004494073.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    57   3e-06
ref|XP_004494071.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    57   3e-06
ref|XP_004494072.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    56   4e-06
ref|XP_006354380.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3...    55   1e-05
ref|XP_004246613.1| PREDICTED: uncharacterized protein LOC101258...    55   1e-05

>emb|CBI30150.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +2

Query: 2   EELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQ 133
           E+L++K+  LEAKCA LE K+ADW  KE++W KREADL  Q++Q
Sbjct: 177 EDLRKKIRSLEAKCASLEKKNADWCMKESDWHKREADLHLQVQQ 220


>ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera]
          Length = 567

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +2

Query: 2   EELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQ 133
           E+L++K+  LEAKCA LE K+ADW  KE++W KREADL  Q++Q
Sbjct: 177 EDLRKKIRSLEAKCASLEKKNADWCMKESDWHKREADLHLQVQQ 220


>ref|XP_004143360.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
           gi|449482586|ref|XP_004156335.1| PREDICTED: E3
           ubiquitin-protein ligase RFWD3-like [Cucumis sativus]
          Length = 617

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 23/43 (53%), Positives = 34/43 (79%)
 Frame = +2

Query: 5   ELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQ 133
           E Q++++ LEA CA LE K+A+W +KE EWKKRE D+Q +L++
Sbjct: 180 ESQKRIKSLEATCASLEKKEANWCKKEVEWKKRETDMQSKLRE 222


>ref|XP_004494073.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X3 [Cicer
           arietinum]
          Length = 631

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = +2

Query: 2   EELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQHKQAEAGL 157
           EE Q+++  LE KCA LE+KD DW  KEA WKKRE+ L   +K  KQ +  L
Sbjct: 221 EESQKRIRSLEIKCATLESKDGDWRMKEAGWKKRESALHLDVKNLKQRQTYL 272


>ref|XP_004494071.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X1 [Cicer
           arietinum]
          Length = 660

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = +2

Query: 2   EELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQHKQAEAGL 157
           EE Q+++  LE KCA LE+KD DW  KEA WKKRE+ L   +K  KQ +  L
Sbjct: 221 EESQKRIRSLEIKCATLESKDGDWRMKEAGWKKRESALHLDVKNLKQRQTYL 272


>ref|XP_004494072.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like isoform X2 [Cicer
           arietinum]
          Length = 658

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = +2

Query: 2   EELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQHKQ 142
           EE Q+++  LE KCA LE+KD DW  KEA WKKRE+ L   +K  KQ
Sbjct: 221 EESQKRIRSLEIKCATLESKDGDWRMKEAGWKKRESALHLDVKNLKQ 267


>ref|XP_006354380.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Solanum
           tuberosum]
          Length = 642

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +2

Query: 2   EELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQHKQ 142
           EELQ+K+  LEA C  LE +  DW +KE EW++REA+L +Q++  K+
Sbjct: 215 EELQKKIRSLEASCFSLEKECTDWCKKEIEWRRREAELHKQVEHLKE 261


>ref|XP_004246613.1| PREDICTED: uncharacterized protein LOC101258298 [Solanum
           lycopersicum]
          Length = 639

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 23/47 (48%), Positives = 34/47 (72%)
 Frame = +2

Query: 2   EELQQKVECLEAKCAHLETKDADWLRKEAEWKKREADLQQQLKQHKQ 142
           EELQ+K+  LEA C  LE +  DW +KE EW++REA+L +Q++  K+
Sbjct: 212 EELQKKIRSLEASCFSLEKECTDWCKKEIEWRRREAELHKQVEHLKE 258


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