BLASTX nr result
ID: Rheum21_contig00005397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00005397
(305 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGM38071.1| putative fibrillarin, partial [Stenocereus gummosus] 67 2e-09
gb|EGZ26190.1| hypothetical protein PHYSODRAFT_481376 [Phytophth... 66 4e-09
gb|ETI36089.1| rRNA 2'-O-methyltransferase fibrillarin [Phytopht... 66 5e-09
ref|XP_006484524.1| PREDICTED: probable mediator of RNA polymera... 65 7e-09
ref|XP_006437602.1| hypothetical protein CICLE_v10032221mg [Citr... 65 7e-09
ref|XP_002905240.1| rRNA 2'-O-methyltransferase fibrillarin, put... 65 7e-09
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana] 65 7e-09
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum] 65 7e-09
ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II tra... 65 9e-09
gb|AAC32120.1| probable fibrillarin [Picea mariana] 65 1e-08
gb|ABK26802.1| unknown [Picea sitchensis] 65 1e-08
ref|NP_567724.1| mediator of RNA polymerase II transcription sub... 64 2e-08
ref|XP_006280722.1| hypothetical protein CARUB_v10026686mg [Caps... 64 2e-08
gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsi... 64 2e-08
ref|XP_002499989.1| predicted protein [Micromonas sp. RCC299] gi... 64 2e-08
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana] 64 2e-08
ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II tra... 64 2e-08
ref|XP_006401819.1| hypothetical protein EUTSA_v10016049mg, part... 64 2e-08
ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [A... 64 2e-08
ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|... 64 3e-08
>gb|AGM38071.1| putative fibrillarin, partial [Stenocereus gummosus]
Length = 157
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA FA E+ QQ
Sbjct: 63 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVKKLQQD 122
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK +E + L E+ VG +RM
Sbjct: 123 QFKPMEQVTLEPFERDHACVVGGYRM 148
>gb|EGZ26190.1| hypothetical protein PHYSODRAFT_481376 [Phytophthora sojae]
Length = 248
Score = 66.2 bits (160), Expect = 4e-09
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDV+ AD P + R+VA+N H+L+ GGHF+IS +A I ST EA FA E+ QQ
Sbjct: 157 VDVVFADVAQPDQARIVALNASHFLKNGGHFVISIKASCIDSTAAPEAVFAREVKKLQQE 216
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ + VG +R+
Sbjct: 217 QFKPAEQLTLEPYERDHAVVVGAYRV 242
>gb|ETI36089.1| rRNA 2'-O-methyltransferase fibrillarin [Phytophthora parasitica
P1569] gi|567950603|gb|ETK76312.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica] gi|567979272|gb|ETL29754.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica] gi|568008766|gb|ETL82981.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica] gi|568038686|gb|ETM36207.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica] gi|568103910|gb|ETN18567.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica INRA-310] gi|570316862|gb|ETO64810.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica P1976] gi|570940643|gb|ETP05900.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica CJ01A1] gi|570970901|gb|ETP34020.1| rRNA
2'-O-methyltransferase fibrillarin [Phytophthora
parasitica P10297]
Length = 318
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDV+ AD P + R+VA+N H+L+ GGHF+IS +A I ST EA FA E+ QQ
Sbjct: 227 VDVVFADVAQPDQARIVAINASHFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQQE 286
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ + VG +R+
Sbjct: 287 QFKPAEQLTLEPYERDHAVVVGAYRV 312
>ref|XP_006484524.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 36b-like [Citrus sinensis]
Length = 305
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATF-AELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA F +E+ QQ
Sbjct: 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQD 273
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ VG +RM
Sbjct: 274 QFKPFEQVTLEPFERDHACVVGGYRM 299
>ref|XP_006437602.1| hypothetical protein CICLE_v10032221mg [Citrus clementina]
gi|557539798|gb|ESR50842.1| hypothetical protein
CICLE_v10032221mg [Citrus clementina]
Length = 305
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATF-AELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA F +E+ QQ
Sbjct: 214 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQD 273
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ VG +RM
Sbjct: 274 QFKPFEQVTLEPFERDHACVVGGYRM 299
>ref|XP_002905240.1| rRNA 2'-O-methyltransferase fibrillarin, putative [Phytophthora
infestans T30-4] gi|262095570|gb|EEY53622.1| rRNA
2'-O-methyltransferase fibrillarin, putative
[Phytophthora infestans T30-4]
Length = 326
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDV+ AD P + R+VA+N H+L+ GGHF+IS +A I ST EA FA E+ QQ
Sbjct: 235 VDVVFADVAQPDQARIVALNASHFLKNGGHFVISIKASCIDSTAPPEAVFAREVKKLQQE 294
Query: 180 EFKLLETIKL---EQGLVMAVGCFR 245
+FK E + L E+ + VG +R
Sbjct: 295 QFKPAEQLTLEPYERDHAVVVGSYR 319
>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
Length = 314
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA FA E+ Q
Sbjct: 221 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQAE 280
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK +E + L E+ VG +R+
Sbjct: 281 QFKPMEQVTLEPFERDHACVVGAYRV 306
>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
Length = 314
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA FA E+ Q
Sbjct: 221 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQAE 280
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK +E + L E+ VG +R+
Sbjct: 281 QFKPMEQVTLEPFERDHACVVGAYRV 306
>ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum lycopersicum]
Length = 314
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA FA E+ Q
Sbjct: 221 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQAE 280
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK +E + L E+ VG +R+
Sbjct: 281 QFKPVEQVTLEPFERDHACVVGAYRV 306
>gb|AAC32120.1| probable fibrillarin [Picea mariana]
Length = 249
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI AD P + R+VA+N ++L+ GGHF++S +A+ I STV +EA FA E+ Q+
Sbjct: 153 VDVIFADVAQPDQARIVALNAHYFLKNGGHFVLSIKANCIDSTVPAEAVFAQEVKKLQKE 212
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ VG +RM
Sbjct: 213 QFKPFEQVTLEPFERDHACVVGGYRM 238
>gb|ABK26802.1| unknown [Picea sitchensis]
Length = 312
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI AD P + R+VA+N ++L+ GGHF++S +A+ I STV +EA FA E+ Q+
Sbjct: 216 VDVIFADVAQPDQARIVALNAHYFLKNGGHFVLSIKANCIDSTVPAEAVFAQEVKKLQKE 275
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ VG +RM
Sbjct: 276 QFKPFEQVTLEPFERDHACVVGGYRM 301
>ref|NP_567724.1| mediator of RNA polymerase II transcription subunit 36a
[Arabidopsis thaliana]
gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
36a; AltName: Full=Fibrillarin-like protein 2; AltName:
Full=Histone-glutamine methyltransferase; AltName:
Full=rRNA 2'-O-methyltransferase fibrillarin 2
gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
[Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
fibrillarin-like protein [Arabidopsis thaliana]
gi|7269413|emb|CAB81373.1| fibrillarin-like protein
[Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
fibrillarin 2 [Arabidopsis thaliana]
gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
[Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
gi|332659685|gb|AEE85085.1| mediator of RNA polymerase
II transcription subunit 36a [Arabidopsis thaliana]
Length = 320
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATF-AELSSRQQR 179
VDVI +D P + R++A+N ++L++GGHF+IS +A+ I STV +EA F E+ QQ
Sbjct: 225 VDVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQE 284
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ VG +RM
Sbjct: 285 QFKPAEQVTLEPFERDHACVVGGYRM 310
>ref|XP_006280722.1| hypothetical protein CARUB_v10026686mg [Capsella rubella]
gi|482549426|gb|EOA13620.1| hypothetical protein
CARUB_v10026686mg [Capsella rubella]
Length = 353
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATF-AELSSRQQR 179
VDVI +D P + R+VA+N +L+ GGHF+IS +A+ I STV +EA F +E+ QQ
Sbjct: 259 VDVIFSDVAQPDQARIVALNASFFLKTGGHFVISIKANCIDSTVPAEAVFQSEVKKLQQE 318
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ VG +RM
Sbjct: 319 QFKPAEQVTLEPFERDHACVVGGYRM 344
>gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana]
Length = 320
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATF-AELSSRQQR 179
VDVI +D P + R++A+N ++L++GGHF+IS +A+ I STV +EA F E+ QQ
Sbjct: 225 VDVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQE 284
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ VG +RM
Sbjct: 285 QFKPAEQVTLEPFERDHACVVGGYRM 310
>ref|XP_002499989.1| predicted protein [Micromonas sp. RCC299]
gi|226515251|gb|ACO61247.1| predicted protein
[Micromonas sp. RCC299]
Length = 291
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VD I AD P + R+VA+N H+L+ GG+F+IS +A I STV +EA FA E+ QQ
Sbjct: 200 VDTIFADVAQPDQARIVALNAQHFLKPGGNFIISIKASCIDSTVPAEAVFAREVKKLQQE 259
Query: 180 EFKLLETIKLE 212
+FK E + LE
Sbjct: 260 QFKPAEQLTLE 270
>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
Length = 314
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF++S +A+ I STV +EA FA E+ Q
Sbjct: 221 VDVIFSDVAQPDQARILALNASYFLKAGGHFVMSIKANCIDSTVPAEAVFAQEVKKLQAE 280
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK +E + L E+ VG +R+
Sbjct: 281 QFKPMEQVTLEPFERDHACVVGAYRV 306
>ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum tuberosum]
Length = 314
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA FA E+ Q
Sbjct: 221 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQAD 280
Query: 180 EFKLLETIKLE 212
+FK +E + LE
Sbjct: 281 QFKPVEQVTLE 291
>ref|XP_006401819.1| hypothetical protein EUTSA_v10016049mg, partial [Eutrema
salsugineum] gi|557102909|gb|ESQ43272.1| hypothetical
protein EUTSA_v10016049mg, partial [Eutrema salsugineum]
Length = 303
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++A+N YL+ GGHF+IS +A I STV EA FA E+ Q
Sbjct: 211 VDVIFSDVAQPDQARIMALNASFYLKTGGHFMISIKASCIDSTVAEEAVFANEVKKLQAE 270
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
FK E + L E+G VG +RM
Sbjct: 271 GFKPAEQLTLEPFERGHACVVGGYRM 296
>ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [Amborella trichopoda]
gi|548839426|gb|ERM99715.1| hypothetical protein
AMTR_s00099p00093470 [Amborella trichopoda]
Length = 245
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATFA-ELSSRQQR 179
VDVI +D P + R++ +N +L++GGHF+IS +A+ I STV +EA FA E+ + Q +
Sbjct: 152 VDVIFSDVAQPDQARIIGLNASFFLKSGGHFVISIKANCIDSTVPAEAVFASEVKTLQSQ 211
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
EFK E + L E+ VG +RM
Sbjct: 212 EFKPAEQVTLEPFERDHACVVGGYRM 237
>ref|XP_002513667.1| fibrillarin, putative [Ricinus communis]
gi|223547575|gb|EEF49070.1| fibrillarin, putative
[Ricinus communis]
Length = 247
Score = 63.5 bits (153), Expect = 3e-08
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +3
Query: 3 VDVICADPTSPTRVRVVAMNVLHYLRAGGHFLISTQADSIVSTVQSEATF-AELSSRQQR 179
VDVI +D P + R++A+N ++L+AGGHF+IS +A+ I STV +EA F +E+ Q
Sbjct: 153 VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFESEVKKMTQE 212
Query: 180 EFKLLETIKL---EQGLVMAVGCFRM 248
+FK E + L E+ +G +RM
Sbjct: 213 QFKPTEQVTLEPFERDHACVIGGYRM 238