BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005338
         (2256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec...  1183   0.0  
ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation spec...  1162   0.0  
gb|EOY23219.1| Cleavage and polyadenylation specificity factor 1...  1157   0.0  
ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation spec...  1149   0.0  
ref|XP_002517902.1| cleavage and polyadenylation specificity fac...  1147   0.0  
ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation spec...  1145   0.0  
gb|EMJ21437.1| hypothetical protein PRUPE_ppa001928mg [Prunus pe...  1145   0.0  
ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation spec...  1143   0.0  
ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citr...  1142   0.0  
ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation spec...  1142   0.0  
ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation spec...  1140   0.0  
gb|EXC19142.1| Cleavage and polyadenylation specificity factor s...  1134   0.0  
ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation spec...  1133   0.0  
gb|ESW24245.1| hypothetical protein PHAVU_004G114000g [Phaseolus...  1130   0.0  
ref|XP_002330904.1| predicted protein [Populus trichocarpa]          1107   0.0  
ref|XP_006369487.1| Cleavage and polyadenylation specificity fac...  1107   0.0  
ref|XP_004308076.1| PREDICTED: cleavage and polyadenylation spec...  1106   0.0  
ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] g...  1097   0.0  
ref|NP_197776.1| cleavage and polyadenylation specificity factor...  1096   0.0  
gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity fa...  1095   0.0  

>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 2
            [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed
            protein product [Vitis vinifera]
          Length = 740

 Score = 1183 bits (3060), Expect = 0.0
 Identities = 585/721 (81%), Positives = 642/721 (89%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFLVDCGWNDHFD + LQPLARVAS+IDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSFLQPLARVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            +HPDT+HLGALPYAMKQLGLSAPVY+TEPVYRLGLLTMYD YLSRKQVS+FDLFTLDDID
Sbjct: 61   AHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQN+HL GKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTYSQNYHLFGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
              LNGT LESFVRPAVLITDAYNALNNQPSRRQRDQ+FLD I+KTLR DG VLLPVDTAG
Sbjct: 181  RLLNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDVILKTLRGDGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++L+LEQ+W QHHL YP+FFLTYV+SST+DY KSFLEWMSDSIAKSFE TRDN FL
Sbjct: 241  RVLELMLILEQYWTQHHLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LKHVTLL++KSELEKVPDGPKIVLASMASLEAGFSHDIFV+WATD +NL+LF+ERGQF T
Sbjct: 301  LKHVTLLISKSELEKVPDGPKIVLASMASLEAGFSHDIFVEWATDAKNLVLFSERGQFAT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+SKR+PLVGEELAAYEEEQ R KKEEAL+ASL KE+E   +  
Sbjct: 361  LARMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQERIKKEEALKASLSKEDEMKASRG 420

Query: 895  ADPSMDDPMAVDSHDTEGLSDGGL-HCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
            +D  + DPM +D+      SD  + H   +RDILIDGFVPPSTS+APMFPFY+NS+ WDD
Sbjct: 421  SDNKLGDPMVIDTTTPPASSDVAVPHVGGHRDILIDGFVPPSTSVAPMFPFYENSSEWDD 480

Query: 718  FGEVINPDDYVIKEENMDQPFMQDGD--LGRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINP+DYVIK+E+MDQ  MQ GD   G+LDE  ASLI D+TPSKV+S+ELTVQVKC+
Sbjct: 481  FGEVINPEDYVIKDEDMDQATMQVGDDLNGKLDEGAASLIFDTTPSKVISNELTVQVKCM 540

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            LVYMDFEGRSDGRSIKSIL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQI E+
Sbjct: 541  LVYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIGET 600

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMSNVLFKKLG+YEV+WVDAEVGKTE+              H 
Sbjct: 601  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTESGSLSLLPLSTPPPSHD 660

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            +V VGDIKMADFKQFLASKG+Q EFS GALRCGE++TLRKVGD SQKGGG   QQIV+EG
Sbjct: 661  TVFVGDIKMADFKQFLASKGIQVEFSGGALRCGEYVTLRKVGDASQKGGGAIIQQIVMEG 720

Query: 4    P 2
            P
Sbjct: 721  P 721


>ref|XP_004140773.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Cucumis sativus]
          Length = 738

 Score = 1162 bits (3006), Expect = 0.0
 Identities = 568/719 (78%), Positives = 637/719 (88%), Gaps = 2/719 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVSVD FNFL+DCGWNDHFD  LLQPL+RVAS+IDAVL+
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD +++RKQVSEFDLFTLDDID
Sbjct: 61   SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT LESFVRPAVLITDAYNALNNQP RRQ+D++F D I KTLR++G VLLPVDTAG
Sbjct: 181  RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++ +LE +W +  L YP+FFLTYV+SST+DY KSFLEWMSD+IAKSFE TR+N FL
Sbjct: 241  RVLELIQILEWYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LKHVTLL+NKSEL+  PDGPK+VLASMASLEAG+SHDIFVDWA D +NL+LF+ERGQFGT
Sbjct: 301  LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNRKKEEALRASLIKEEESSVAHSA 893
            LARMLQADPPPKAVK T+SKR+PL G+EL AYEEEQNRKKEEAL+ASL+KEE+S  +H A
Sbjct: 361  LARMLQADPPPKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGA 420

Query: 892  DPSMDDPMAVDSHDTEGLSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDDFG 713
            D    DPM +D+        G  H  AYRDILIDGFVPPST +APMFPFY+N++ WDDFG
Sbjct: 421  DNDTGDPMIIDASSNVAPDVGSSHGGAYRDILIDGFVPPSTGVAPMFPFYENTSAWDDFG 480

Query: 712  EVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCLLV 539
            EVINPDDYVIK+E+MDQ  M   GD+ G+LDE  A+LILD  PSKVVS+ELTVQVKC L 
Sbjct: 481  EVINPDDYVIKDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLH 540

Query: 538  YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESID 359
            YMDFEGRSDGRSIKSIL+HVAPLKLVLVHG+AEATEHLKQHCLK+VCPHVYAPQIEE+ID
Sbjct: 541  YMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQIEETID 600

Query: 358  VTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHKSV 179
            VTSDLCAYKVQLSEKLMSNVLFKKLG+YE++W+DAEVGKTEN             PHKSV
Sbjct: 601  VTSDLCAYKVQLSEKLMSNVLFKKLGDYEITWLDAEVGKTENGTLSLLPLSKAPAPHKSV 660

Query: 178  LVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEGP 2
            LVGD+KMADFKQFLASKG+Q EF+ GALRCGE++TLRKV D SQKGGG+G+QQ+VIEGP
Sbjct: 661  LVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKGGGSGTQQVVIEGP 719


>gb|EOY23219.1| Cleavage and polyadenylation specificity factor 100 isoform 1
            [Theobroma cacao]
          Length = 742

 Score = 1157 bits (2992), Expect = 0.0
 Identities = 571/723 (78%), Positives = 647/723 (89%), Gaps = 6/723 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFL+DCGWND FD +LLQPL+RVA +IDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDPSLLQPLSRVAPTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALPYAMKQ GLSAPVY+TEPV+RLGLLTMYD YLSRKQVSEF+LFTLDDID
Sbjct: 61   SHPDTLHLGALPYAMKQFGLSAPVYSTEPVFRLGLLTMYDQYLSRKQVSEFELFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQN+HLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFN RKE
Sbjct: 121  SAFQNVTRLTYSQNYHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNRRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQP--SRRQRDQDFLDAIMKTLRSDGKVLLPVDT 1439
             HLNGT LESFVRPAVLITDAYNALNNQP   +R+RD+DF+D I +TL + G VLLPVDT
Sbjct: 181  KHLNGTVLESFVRPAVLITDAYNALNNQPPKQQRERDRDFVDTISRTLEAGGNVLLPVDT 240

Query: 1438 AGRALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNP 1259
             GR LE+LL+LE+HWA   L YP+FFLTYVSSST+DY KSFLEWMSD+IAKSFE +RDN 
Sbjct: 241  TGRVLELLLVLEEHWAMKSLNYPIFFLTYVSSSTIDYVKSFLEWMSDAIAKSFETSRDNA 300

Query: 1258 FLLKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQF 1079
            FLL+HVTLL++K+EL+KVPDGPK+VLASMASLEAGFSHDIFV+WA D +NL+LFTERGQF
Sbjct: 301  FLLRHVTLLISKNELDKVPDGPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQF 360

Query: 1078 GTLARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVA 902
            GTLARMLQADPPPKAVK  +S+R+PLVGEEL A+EEEQNR KKEEAL+ASLIKEEES  +
Sbjct: 361  GTLARMLQADPPPKAVKVMMSRRVPLVGEELIAHEEEQNRLKKEEALKASLIKEEESKAS 420

Query: 901  HSADPSMDDPMAVDSHDTEGLSDG-GLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVW 725
               D S  DPM +D+++     DG G H S YRDILIDGFVPPSTS+APMFPFY+N++ W
Sbjct: 421  IVPDISSSDPMVIDTNNKHSSLDGLGQHGSGYRDILIDGFVPPSTSVAPMFPFYENASDW 480

Query: 724  DDFGEVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVK 551
            DDFGEVINPDDYVIK+E+MDQ  M   GD+ G++DEA+ASLI+D+TPSKV+S+ELTVQVK
Sbjct: 481  DDFGEVINPDDYVIKDEDMDQAAMHVGGDMDGKVDEASASLIVDTTPSKVISNELTVQVK 540

Query: 550  CLLVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIE 371
              L+YMD+EGRSDGRS+KSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIE
Sbjct: 541  SSLIYMDYEGRSDGRSVKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIE 600

Query: 370  ESIDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXP 191
            E+IDVTSDLCAYKVQLSEKLMSNVLFKKLG+YE++WVDAEVGKTEN+M           P
Sbjct: 601  ETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENEMLSLLPLSTPAPP 660

Query: 190  HKSVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVI 11
            HKSV+VGD+K+ADFKQFLASKGV+ EF+ GALRCGE++TLRKVG  SQKGGG+G+QQI+I
Sbjct: 661  HKSVVVGDLKLADFKQFLASKGVKVEFAGGALRCGEYVTLRKVGFASQKGGGSGTQQIII 720

Query: 10   EGP 2
            EGP
Sbjct: 721  EGP 723


>ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Solanum lycopersicum]
          Length = 739

 Score = 1149 bits (2973), Expect = 0.0
 Identities = 568/721 (78%), Positives = 641/721 (88%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFLVDCGWNDHFD +LLQPL+RVAS++DAVL+
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDTSLLQPLSRVASTVDAVLI 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SH DT HLGALPYAMKQLGLSAP+YATEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID
Sbjct: 61   SHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQNH++SGKGEGIVIAP VAGHLLGGT W+ITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT LESFVRPAVLITDA+NALNNQP RRQRDQ+FLDAI +TL   G VLLPVDTAG
Sbjct: 181  RHLNGTVLESFVRPAVLITDAFNALNNQPPRRQRDQEFLDAIERTLNVGGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++L LEQHW Q  L+ P++FL+YVSSST+DY KSFLEWMSDSIAKSFE TRDN FL
Sbjct: 241  RVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            L+ + L++NKS LE+ P GPK+V+ASMASLEAGFSHD+FV+WA DP+NL++FTERGQFGT
Sbjct: 301  LRKIKLVINKSALEEAP-GPKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTERGQFGT 359

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LAR+LQ+DPPPKAVK T+S+RIPLVGEELAAYEEEQNR K+EEAL+A+L+KEEES  +  
Sbjct: 360  LARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEESKASVG 419

Query: 895  ADPSMDDPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
            A+   DDPMAVD++ T   S+  GLH  A++D+LIDGFV  S+SIAPMFPFYDN++ WDD
Sbjct: 420  AEVVTDDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSIAPMFPFYDNTSEWDD 479

Query: 718  FGEVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINPDDYV+K++NM+Q FM  DGDL G+LDE +A+LILD+TPSKV SSELTVQVKC 
Sbjct: 480  FGEVINPDDYVVKDDNMEQSFMHVDGDLNGKLDEGSANLILDTTPSKVESSELTVQVKCS 539

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCP VYAPQ+EE+
Sbjct: 540  LLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAPQLEET 599

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMS VLFKKLG+YE++WVDAEVGKTENDM           PHK
Sbjct: 600  IDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGPSPPHK 659

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            +VLVGD+KM+DFKQFLASKGVQ EF  GALRCGE++T+RKVGD SQK GG   QQIV+EG
Sbjct: 660  TVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLEG 719

Query: 4    P 2
            P
Sbjct: 720  P 720


>ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223542884|gb|EEF44420.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 740

 Score = 1147 bits (2967), Expect = 0.0
 Identities = 565/721 (78%), Positives = 638/721 (88%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPL GV+NENPLSYL+S+D FN L+DCGWNDHFD +LLQPL+RVAS+IDAVLL
Sbjct: 1    MGTSVQVTPLNGVYNENPLSYLISIDNFNLLIDCGWNDHFDPSLLQPLSRVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SH DT+HLGALPYAMKQLGLSAPVY+TEPVYRLGLLTMYD YLSRK VSEFDLF+LDDID
Sbjct: 61   SHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVSEFDLFSLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ + RL YSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121  SAFQNITRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLD-AIMKTLRSDGKVLLPVDTA 1436
             HLNGT LESFVRPAVLITDAYNAL+NQP R+QRD++FL+  I+KTL + G VLLPVDTA
Sbjct: 181  RHLNGTVLESFVRPAVLITDAYNALSNQPPRQQRDKEFLEKTILKTLEAGGNVLLPVDTA 240

Query: 1435 GRALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPF 1256
            GR LE+LL+LEQ WA   L YP+FFLTYVSSST+DY KSFLEWMSDSIAKSFE +RDN F
Sbjct: 241  GRVLELLLILEQFWAHRLLNYPIFFLTYVSSSTIDYVKSFLEWMSDSIAKSFETSRDNAF 300

Query: 1255 LLKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFG 1076
            LLKHVTLL+NK+EL+  P+ PK+VLASMASLEAGFSHDIFV+WA D +NL+LFTERGQFG
Sbjct: 301  LLKHVTLLINKNELDNAPNVPKVVLASMASLEAGFSHDIFVEWAADVKNLVLFTERGQFG 360

Query: 1075 TLARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAH 899
            TLARMLQADPPPKAVK T+S+R+PLVG+EL AYEEEQ R KKEE L AS+IKEEE+ V+H
Sbjct: 361  TLARMLQADPPPKAVKVTMSRRVPLVGDELIAYEEEQKRLKKEEELNASMIKEEEAKVSH 420

Query: 898  SADPSMDDPMAVD-SHDTEGLSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWD 722
              D ++ DPM +D S++   L   G   + YRDIL DGFVPPSTS+APMFPFY+N+  WD
Sbjct: 421  GPDSNLSDPMIIDASNNNASLDAVGSQGTGYRDILFDGFVPPSTSVAPMFPFYENTTEWD 480

Query: 721  DFGEVINPDDYVIKEENMDQPFMQDGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            DFGEVINPDDYVIK+++MDQP    GD+ G+ DE +AS ILD+ PSKVVSSELTVQVKC 
Sbjct: 481  DFGEVINPDDYVIKDDDMDQPMHVGGDIDGKFDEGSASWILDTKPSKVVSSELTVQVKCS 540

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMD+EGRSDGRSIKSILAHVAPLKLVLVHGSAE+TEHLKQHCLKHVCPHVYAPQIEE+
Sbjct: 541  LIYMDYEGRSDGRSIKSILAHVAPLKLVLVHGSAESTEHLKQHCLKHVCPHVYAPQIEET 600

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMSNVLFKKLG++E++WVDAEVGKTE+D            PHK
Sbjct: 601  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDFEIAWVDAEVGKTESDALSLLPISTSAPPHK 660

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            SVLVGD+KMADFKQFLASKGVQ EF+ GALRCGE++TLRKVG+ +QKGGG+G+QQIVIEG
Sbjct: 661  SVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNINQKGGGSGTQQIVIEG 720

Query: 4    P 2
            P
Sbjct: 721  P 721


>ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform X1 [Glycine max]
          Length = 739

 Score = 1145 bits (2963), Expect = 0.0
 Identities = 566/720 (78%), Positives = 630/720 (87%), Gaps = 3/720 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFLVDCGWNDHFD + LQPLARVAS+IDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSHLQPLARVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SH DT+HLGALPYAMK+LGLSAPVY+TEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID
Sbjct: 61   SHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQNHH SGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT L SFVRPAVLITDAYNALNNQP RRQ D++F D + KTLR+ G VLLPVDT G
Sbjct: 181  RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTVG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++LMLE +WA  +L YP++FLTYV+SST+DY KSFLEWMSD+IAKSFE+TR+N FL
Sbjct: 241  RVLELILMLELYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LK+VTLL+NK+EL+  PDGPK+VLASMASLEAGFSHDIFV+WA D +NL+LFTERGQF T
Sbjct: 301  LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFAT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNRKKEEALRASLIKEEESSVAHSA 893
            LARMLQADPPPKAVK  +SKR+PLVGEEL AYEEEQNR K+EAL+ASL+KEEE   +H A
Sbjct: 361  LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGA 420

Query: 892  DPSMDDPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDDF 716
            D  + DPM +DS +     +  G     YRDI IDGFVPPSTS+AP+FP Y+N++ WDDF
Sbjct: 421  DNDISDPMVIDSGNNHVPPEVTGPRGGGYRDIFIDGFVPPSTSVAPIFPCYENTSEWDDF 480

Query: 715  GEVINPDDYVIKEENMDQPFMQDGD--LGRLDEATASLILDSTPSKVVSSELTVQVKCLL 542
            GEVINPDDYVIK+E+MDQ  M  G    G+LDE  ASLILD+ PSKVVS E TVQV+C L
Sbjct: 481  GEVINPDDYVIKDEDMDQTAMHGGSDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSL 540

Query: 541  VYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESI 362
            VYMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEE+I
Sbjct: 541  VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETI 600

Query: 361  DVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHKS 182
            DVTSDLCAYKVQLSEKLMSNVLFKKLG+YE++WVDA VGKTEND            PHKS
Sbjct: 601  DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDPLSLLPVSGAAPPHKS 660

Query: 181  VLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEGP 2
            VLVGD+K+AD KQFL+SKGVQ EF+ GALRCGE++TLRKVGD SQKGGG+G+QQIVIEGP
Sbjct: 661  VLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEGP 720


>gb|EMJ21437.1| hypothetical protein PRUPE_ppa001928mg [Prunus persica]
          Length = 740

 Score = 1145 bits (2962), Expect = 0.0
 Identities = 562/721 (77%), Positives = 635/721 (88%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFL+DCGWNDHFD +LL+PL+RVAS++DAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLEPLSRVASTVDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALP+AMKQLGLSA VY+TEPVYRLGLLTMYD YLSRKQVS+FDLFTLDDID
Sbjct: 61   SHPDTLHLGALPFAMKQLGLSAVVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL Y+QNHHLSGKGEGIVI+PHV+GHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTYAQNHHLSGKGEGIVISPHVSGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNG    SFVRPAVLITDAYNALNNQP RRQ+D++F D I KTLRSDG VLLPVDTAG
Sbjct: 181  KHLNGINQASFVRPAVLITDAYNALNNQPYRRQKDKEFTDTIKKTLRSDGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++ +LE  WA  +L YP+FFLTYV+SST+DY KSFLEWMSDSIAKSFE+TR+N F+
Sbjct: 241  RVLELVQILESCWADENLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENAFI 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LK +TLLVNKSEL+  PDGPK+VLASMASLEAGFSHDIFV+WATDP+NL+LFTER QFGT
Sbjct: 301  LKRITLLVNKSELDNAPDGPKVVLASMASLEAGFSHDIFVEWATDPKNLVLFTERAQFGT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+S+R+PLVGEEL AYEEEQNR +K+EAL+ASLIKEEES  A  
Sbjct: 361  LARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQNRIRKDEALKASLIKEEESKSAQG 420

Query: 895  ADPSMDDPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
            AD S  DP  VD+ +T  L D  G H   YRD+LIDGF PPSTS APMFPFY+N++ WDD
Sbjct: 421  ADVSTSDPTVVDASNTHSLLDAAGPHGGGYRDMLIDGFTPPSTSAAPMFPFYENNSDWDD 480

Query: 718  FGEVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINPDDYVIK+ +MDQ  M   GD+ G+LDE +ASLILD+ PSKVV++ELTVQVKC 
Sbjct: 481  FGEVINPDDYVIKDADMDQGAMHVGGDMDGKLDEGSASLILDTRPSKVVATELTVQVKCS 540

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMDFEGRSD RSIKSIL+H+APLKLVLVHG+AEATEHLKQHCL HVCPHVYAPQIEE+
Sbjct: 541  LIYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLTHVCPHVYAPQIEET 600

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMSNVLFKKLG+YE++WVD+E GKTEN             PH+
Sbjct: 601  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDSEAGKTENGALSLLPISTPAPPHE 660

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            SVLVGD+KMA+FKQFL+  GVQ EF+ GALRCGE++TLRKVGD S KGGG+G+QQIVIEG
Sbjct: 661  SVLVGDLKMANFKQFLSDNGVQVEFAGGALRCGEYVTLRKVGDASHKGGGSGTQQIVIEG 720

Query: 4    P 2
            P
Sbjct: 721  P 721


>ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform X2 [Citrus sinensis]
          Length = 738

 Score = 1143 bits (2957), Expect = 0.0
 Identities = 561/720 (77%), Positives = 639/720 (88%), Gaps = 3/720 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPL GVFNENPLSYLVS+DGFNFL+DCGWNDHFD +LLQPL++VAS+IDAVLL
Sbjct: 1    MGTSVQVTPLSGVFNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD YLSR+QVSEFDLFTLDDID
Sbjct: 61   SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQN+HLSGKGEGIV+APHVAGHLLGGT+WKITKDGEDVIYAVD+N RKE
Sbjct: 121  SAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYNRRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT LESFVRPAVLITDAYNAL+NQP R+QR+  F DAI KTLR+ G VLLPVD+AG
Sbjct: 181  KHLNGTVLESFVRPAVLITDAYNALHNQPPRQQREM-FQDAISKTLRAGGNVLLPVDSAG 239

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE+LL+LE +WA+H L YP++FLTYVSSST+DY KSFLEWM DSI KSFE +RDN FL
Sbjct: 240  RVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSRDNAFL 299

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LKHVTLL+NKSEL+  PDGPK+VLASMASLEAGFSHDIFV+WA+D +NL+LFTERGQFGT
Sbjct: 300  LKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTERGQFGT 359

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+S+R+PLVGEEL AYEEEQ R KKEEAL+ASL+KEEES  +  
Sbjct: 360  LARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEESKASLG 419

Query: 895  ADPSMD-DPMAVDSHDTEGLSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
             D ++  DPM +D+++    +    H   YRDILIDGFVPPSTS+APMFPFY+N++ WDD
Sbjct: 420  PDNNLSGDPMVIDANNANASAVVEPHGGRYRDILIDGFVPPSTSVAPMFPFYENNSEWDD 479

Query: 718  FGEVINPDDYVIKEENMDQPFMQ-DGDLGRLDEATASLILDSTPSKVVSSELTVQVKCLL 542
            FGEVINPDDY+IK+E+MDQ  M   GD G+LDE +ASLILD+ PSKVVS+ELTVQVKCLL
Sbjct: 480  FGEVINPDDYIIKDEDMDQAAMHIGGDDGKLDEGSASLILDAKPSKVVSNELTVQVKCLL 539

Query: 541  VYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESI 362
            +++D+EGR+DGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVY PQIEE+I
Sbjct: 540  IFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTPQIEETI 599

Query: 361  DVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHKS 182
            DVTSDLCAYKVQLSEKLMSNVLFKKLG+YE++WVDAEVGKTEN M           PHKS
Sbjct: 600  DVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTPAPPHKS 659

Query: 181  VLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEGP 2
            VLVGD+KMAD K FL+SKG+Q EF+ GALRCGE++T+RKVG   QKGGG+G+QQIVIEGP
Sbjct: 660  VLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQIVIEGP 719


>ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citrus clementina]
            gi|568874619|ref|XP_006490411.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 2-like isoform
            X1 [Citrus sinensis] gi|557523821|gb|ESR35188.1|
            hypothetical protein CICLE_v10004414mg [Citrus
            clementina]
          Length = 739

 Score = 1142 bits (2954), Expect = 0.0
 Identities = 562/721 (77%), Positives = 640/721 (88%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPL GVFNENPLSYLVS+DGFNFL+DCGWNDHFD +LLQPL++VAS+IDAVLL
Sbjct: 1    MGTSVQVTPLSGVFNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYD YLSR+QVSEFDLFTLDDID
Sbjct: 61   SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQYLSRRQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQN+HLSGKGEGIV+APHVAGHLLGGT+WKITKDGEDVIYAVD+N RKE
Sbjct: 121  SAFQSVTRLTYSQNYHLSGKGEGIVVAPHVAGHLLGGTVWKITKDGEDVIYAVDYNRRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT LESFVRPAVLITDAYNAL+NQP R+QR+  F DAI KTLR+ G VLLPVD+AG
Sbjct: 181  KHLNGTVLESFVRPAVLITDAYNALHNQPPRQQREM-FQDAISKTLRAGGNVLLPVDSAG 239

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE+LL+LE +WA+H L YP++FLTYVSSST+DY KSFLEWM DSI KSFE +RDN FL
Sbjct: 240  RVLELLLILEDYWAEHSLNYPIYFLTYVSSSTIDYVKSFLEWMGDSITKSFETSRDNAFL 299

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LKHVTLL+NKSEL+  PDGPK+VLASMASLEAGFSHDIFV+WA+D +NL+LFTERGQFGT
Sbjct: 300  LKHVTLLINKSELDNAPDGPKLVLASMASLEAGFSHDIFVEWASDVKNLVLFTERGQFGT 359

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+S+R+PLVGEEL AYEEEQ R KKEEAL+ASL+KEEES  +  
Sbjct: 360  LARMLQADPPPKAVKVTMSRRVPLVGEELIAYEEEQTRLKKEEALKASLVKEEESKASLG 419

Query: 895  ADPSMD-DPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWD 722
             D ++  DPM +D+++    +D    H   YRDILIDGFVPPSTS+APMFPFY+N++ WD
Sbjct: 420  PDNNLSGDPMVIDANNANASADVVEPHGGRYRDILIDGFVPPSTSVAPMFPFYENNSEWD 479

Query: 721  DFGEVINPDDYVIKEENMDQPFMQ-DGDLGRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            DFGEVINPDDY+IK+E+MDQ  M   GD G+LDE +ASLILD+ PSKVVS+ELTVQVKCL
Sbjct: 480  DFGEVINPDDYIIKDEDMDQAAMHIGGDDGKLDEGSASLILDAKPSKVVSNELTVQVKCL 539

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+++D+EGR+DGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVY PQIEE+
Sbjct: 540  LIFIDYEGRADGRSIKTILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYTPQIEET 599

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMSNVLFKKLG+YE++WVDAEVGKTEN M           PHK
Sbjct: 600  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTENGMLSLLPISTPAPPHK 659

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            SVLVGD+KMAD K FL+SKG+Q EF+ GALRCGE++T+RKVG   QKGGG+G+QQIVIEG
Sbjct: 660  SVLVGDLKMADLKPFLSSKGIQVEFAGGALRCGEYVTIRKVGPAGQKGGGSGTQQIVIEG 719

Query: 4    P 2
            P
Sbjct: 720  P 720


>ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Solanum tuberosum]
          Length = 739

 Score = 1142 bits (2953), Expect = 0.0
 Identities = 564/721 (78%), Positives = 639/721 (88%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGVFNENPLSYLVS+DGFNFLVDCGWNDHFD +LLQPL+RVAS++DAVL+
Sbjct: 1    MGTSVQVTPLCGVFNENPLSYLVSIDGFNFLVDCGWNDHFDTSLLQPLSRVASTVDAVLI 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SH DT HLGALPYAMKQLGLSAP+YATEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID
Sbjct: 61   SHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQNH++SGKGEGIVIAP VAGHLLGGT W+ITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTYSQNHYMSGKGEGIVIAPLVAGHLLGGTTWRITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT LESFVRPAVLITDA+NALNNQP RRQRDQ+FLDAI +T+   G VLLPVDTAG
Sbjct: 181  RHLNGTVLESFVRPAVLITDAFNALNNQPPRRQRDQEFLDAIERTVNVGGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++L LEQHW Q  L+ P++FL+YVSSST+DY KSFLEWMSDSIAKSFE TRDN FL
Sbjct: 241  RVLELILTLEQHWTQKQLSTPIYFLSYVSSSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            L+ + L++NKS LE+ P G K+V+ASMASLEAGFSHD+FV+WA DP+NL++FTERGQFGT
Sbjct: 301  LRKIKLVINKSALEEAP-GSKVVMASMASLEAGFSHDLFVEWAADPKNLVMFTERGQFGT 359

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LAR+LQ+DPPPKAVK T+S+RIPLVGEELAAYEEEQNR K+EEAL+A+L+KEEES  +  
Sbjct: 360  LARILQSDPPPKAVKVTMSRRIPLVGEELAAYEEEQNRIKREEALKATLVKEEESKASVG 419

Query: 895  ADPSMDDPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
            A+   +DPMAVD++ T   S+  GLH  A++D+LIDGFV  S+S+APMFPFYDN++ WDD
Sbjct: 420  AEVVTNDPMAVDTNVTHPSSNASGLHSGAFKDVLIDGFVTTSSSVAPMFPFYDNTSEWDD 479

Query: 718  FGEVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINPDDYV+K++NM+Q  M  DGDL G+LDE +A+LILD+TPSKV SSELTVQVKC 
Sbjct: 480  FGEVINPDDYVVKDDNMEQSLMHVDGDLNGKLDEGSANLILDTTPSKVESSELTVQVKCS 539

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCP VYAPQ+EE+
Sbjct: 540  LLYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPQVYAPQLEET 599

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMS VLFKKLG+YE++WVDAEVGKTENDM           PHK
Sbjct: 600  IDVTSDLCAYKVQLSEKLMSQVLFKKLGDYEIAWVDAEVGKTENDMFSLLPLSGPAPPHK 659

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            +VLVGD+KM+DFKQFLASKGVQ EF  GALRCGE++T+RKVGD SQK GG   QQIV+EG
Sbjct: 660  TVLVGDLKMSDFKQFLASKGVQVEFGGGALRCGEYVTIRKVGDASQKVGGAAIQQIVLEG 719

Query: 4    P 2
            P
Sbjct: 720  P 720


>ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like isoform 1 [Glycine max]
          Length = 738

 Score = 1140 bits (2948), Expect = 0.0
 Identities = 562/719 (78%), Positives = 627/719 (87%), Gaps = 2/719 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFLVDCGWNDHFD +LLQPLARVAS+IDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSLLQPLARVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SH DT+HLGALPYAMKQLGLSAPVY+TEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID
Sbjct: 61   SHADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            S+FQ V RL YSQNHH SGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SSFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT L SFVRPAVLITDAYNALNNQP RRQ D++F D + KTLR  G VLLPVDT G
Sbjct: 181  RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLREGGNVLLPVDTVG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++LMLE +W   +L YP++FLTYV+SST+DY KSFLEWMSD+IAKSFE+TR+N FL
Sbjct: 241  RVLELILMLESYWTDENLNYPIYFLTYVASSTIDYVKSFLEWMSDTIAKSFEKTRENIFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LK+VTLL+NK+EL+  PDGPK+VLASMASLEAGFSH+IFV+WA D +NL+LFTERGQF T
Sbjct: 301  LKYVTLLINKTELDNAPDGPKVVLASMASLEAGFSHEIFVEWANDVKNLVLFTERGQFAT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNRKKEEALRASLIKEEESSVAHSA 893
            LARMLQADPPPKAVK  +SKR+ LVGEEL AYEEEQNR K+EAL+ASL+KEEE   +H A
Sbjct: 361  LARMLQADPPPKAVKVVVSKRVALVGEELIAYEEEQNRIKKEALKASLMKEEEFKTSHGA 420

Query: 892  DPSMDDPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDDF 716
            D +  D M +DS +     +  G     YRDI IDGFVPP TS+APMFP Y+N++ WDDF
Sbjct: 421  DNNTSDSMVIDSGNNHVPPEVSGPRGGGYRDIFIDGFVPPLTSVAPMFPCYENTSEWDDF 480

Query: 715  GEVINPDDYVIKEENMDQPFMQDGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCLLV 539
            GEVINPDDYVIK+E+MDQ  M  GD+ G+LDE  ASLILD+ PSKVVS E TVQV+C LV
Sbjct: 481  GEVINPDDYVIKDEDMDQTAMHGGDINGKLDEGAASLILDTKPSKVVSDERTVQVRCSLV 540

Query: 538  YMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESID 359
            YMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQ+EE+ID
Sbjct: 541  YMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQLEETID 600

Query: 358  VTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHKSV 179
            VTSDLCAYKV LSEKLMSNVLFKKLG+YE++WVDA VGKTEND            PHKSV
Sbjct: 601  VTSDLCAYKVLLSEKLMSNVLFKKLGDYELAWVDAVVGKTENDPLSLLPVSGAAPPHKSV 660

Query: 178  LVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEGP 2
            LVGD+K+AD KQFL+SKGVQ EF+ GALRCGE++TLRKVGD SQKGGG+G+QQIVIEGP
Sbjct: 661  LVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKGGGSGAQQIVIEGP 719


>gb|EXC19142.1| Cleavage and polyadenylation specificity factor subunit 2 [Morus
            notabilis]
          Length = 741

 Score = 1134 bits (2934), Expect = 0.0
 Identities = 559/722 (77%), Positives = 631/722 (87%), Gaps = 5/722 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFL+DCGWNDH D ++LQPL +VAS++DAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHLDPSILQPLTKVASTVDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SH DT+HLGALPYAMKQ GLSAPVY+TEPVYRLGLLTMYD +L RKQVSEFDLFTLDDID
Sbjct: 61   SHADTLHLGALPYAMKQFGLSAPVYSTEPVYRLGLLTMYDQFLWRKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL Y+QNHHLSGKGEGIVI+PHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTYAQNHHLSGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNG    SFVRPAVLITDAYNALNNQP RRQ D++F D I KTLR DGKVLLPVDTAG
Sbjct: 181  KHLNGINPASFVRPAVLITDAYNALNNQPYRRQMDKEFTDTIKKTLRIDGKVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE+L +LE  WA+  L+YP++FLTYV+SST+DY KSFLEWMSDSIAKSFE+TRDN FL
Sbjct: 241  RVLELLQILESCWAEESLSYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRDNAFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LKHVTLLVNK++L   PDGPK+VLASMASLEAGFSHDIFV+WATD RNL+LFTERGQFGT
Sbjct: 301  LKHVTLLVNKTDLNNAPDGPKVVLASMASLEAGFSHDIFVEWATDARNLVLFTERGQFGT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+SKR+PLVGEEL AYEEEQNR K+EEAL+ASLIKEEES  +H 
Sbjct: 361  LARMLQADPPPKAVKVTMSKRVPLVGEELIAYEEEQNRIKREEALKASLIKEEESKASHG 420

Query: 895  ADPSMDDPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
             D ++ DPM +D+  T  L D  G H   YRD+ IDGFVP STS+APMFPF++ ++ WDD
Sbjct: 421  TDINISDPMVIDASITNPLPDVAGPHSGGYRDVFIDGFVPSSTSVAPMFPFFETTSEWDD 480

Query: 718  FGEVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINPD+Y+IK+E+MDQ  M   GD+ G+LDEA+ASLILD+ PSKV+S+ELTV VKC 
Sbjct: 481  FGEVINPDNYIIKDEDMDQGAMHVSGDMDGKLDEASASLILDTKPSKVISNELTVPVKCS 540

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMDFEGRSD RSIKSIL+H+APLKLVLVHG+AEATEHLKQHC+K VCPHVYAPQIEE+
Sbjct: 541  LLYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCIKQVCPHVYAPQIEET 600

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            ID+TSDLCAYKVQLSEKLMSNVLFKKLG++E +WVD+EVGKTEN             PHK
Sbjct: 601  IDITSDLCAYKVQLSEKLMSNVLFKKLGDHETAWVDSEVGKTENGTLSLLPLSSAAPPHK 660

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFS-AGALRCGEFITLRKVGDPSQKGGGTGSQQIVIE 8
            SVLVGD+KMA+FKQFLA  GVQ EF+  GALRCGE++TLRKVGD S KGGG G+QQIVIE
Sbjct: 661  SVLVGDLKMANFKQFLADNGVQVEFAGGGALRCGEYVTLRKVGDASHKGGGPGTQQIVIE 720

Query: 7    GP 2
            GP
Sbjct: 721  GP 722


>ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Cicer arietinum]
          Length = 740

 Score = 1133 bits (2930), Expect = 0.0
 Identities = 554/721 (76%), Positives = 637/721 (88%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFL+D GWND+FD +LLQPL++VASSIDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDVGWNDNFDPSLLQPLSKVASSIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALPYAMKQLGLSAPV++TEPVYRLGLLTMYDH+LSRKQ+S+FDLFTLD ID
Sbjct: 61   SHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDHFLSRKQISDFDLFTLDHID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQNHHLSGKGEGIVIAPH AGHLLGGTIWKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQSVTRLTYSQNHHLSGKGEGIVIAPHNAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT L SFVRPAVLITDAYNALNNQP RRQ+D++F D + KTLR+ G VLLPVDTAG
Sbjct: 181  RHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++LMLE +W+  +L YP++FLTYV+SST+DY KSFLEWMSDSIAKSFEQTR+N FL
Sbjct: 241  RVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LK+VTL+VNK++ +  PDGPK+VLASMASLEAGFSHDIFV+W  D +NL+LFTERGQFGT
Sbjct: 301  LKYVTLMVNKTDFDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTERGQFGT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+SKR+PLVGEEL AYEEEQNR KKEEAL+ASL+KEEE   +H 
Sbjct: 361  LARMLQADPPPKAVKVTVSKRVPLVGEELIAYEEEQNRIKKEEALKASLLKEEELKASHG 420

Query: 895  ADPSMDDPMAVDSHDTEGLSDGGLHCS-AYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
            AD +  DPM +D+ + +   +  +  +  YRD+ IDGFVPPSTS+APMFP Y+N++ WDD
Sbjct: 421  ADNNTSDPMVIDTGNKQPSPEATVQRNGGYRDVFIDGFVPPSTSVAPMFPCYENTSEWDD 480

Query: 718  FGEVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINPDDYVIK+E+MDQ      GD+ G+LDE  ASLILD+ PSKV+S E TVQV+C 
Sbjct: 481  FGEVINPDDYVIKDEDMDQNANHVGGDINGKLDEGPASLILDTKPSKVLSDERTVQVRCS 540

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEAT+HLKQHCLK+VCPHVYAPQIEE+
Sbjct: 541  LIYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATDHLKQHCLKNVCPHVYAPQIEET 600

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSE+LMSNVLFKKLGEYE++WVDAEVGK ENDM           PHK
Sbjct: 601  IDVTSDLCAYKVQLSERLMSNVLFKKLGEYEIAWVDAEVGKAENDMLSLLPVSGPPRPHK 660

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            SVLVGD+K+ADFKQFL++KGV  EF+ GALRCGE++T+RKVGD +QKG G+G+QQI+IEG
Sbjct: 661  SVLVGDLKLADFKQFLSTKGVPVEFAGGALRCGEYVTVRKVGDAAQKGAGSGTQQIIIEG 720

Query: 4    P 2
            P
Sbjct: 721  P 721


>gb|ESW24245.1| hypothetical protein PHAVU_004G114000g [Phaseolus vulgaris]
          Length = 739

 Score = 1130 bits (2924), Expect = 0.0
 Identities = 558/720 (77%), Positives = 629/720 (87%), Gaps = 3/720 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+D FNFL+DCGWNDHFD +LLQPL+RVAS+IDAVL+
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDDFNFLIDCGWNDHFDPSLLQPLSRVASTIDAVLV 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SH D +HLGALPYAMKQLGLSAPVY+TEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID
Sbjct: 61   SHADILHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQNHHL+GKGEGIVIAPHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQSVTRLTYSQNHHLTGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT L SFVRPAVLITDAYNALNNQP RRQ D++F D + KTLR+ G VLLPVDTAG
Sbjct: 181  RHLNGTALGSFVRPAVLITDAYNALNNQPYRRQNDKEFGDILKKTLRAGGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE++LMLE +W+  +L YP++FLTYV+SST+DY KSFLEWMSDSIAKSFE+TR+N FL
Sbjct: 241  RVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LK++TLL+NK+EL+  P+GPK+VLASMASLEAGFSHDIFV+WA D +NL+LFTERGQF T
Sbjct: 301  LKYITLLINKTELDNAPEGPKVVLASMASLEAGFSHDIFVEWANDMKNLVLFTERGQFAT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNRKKEEALRASLIKEEESSVAHSA 893
            LARMLQADPPPKAVK  +SKR+PLVGEEL AYEEEQNR K+EAL+ASL+KEEE   +H +
Sbjct: 361  LARMLQADPPPKAVKVVVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEELKTSHGS 420

Query: 892  DPSMDDPMAVDSHDTEGLSD-GGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDDF 716
            D +  DPM VDS +     +  G     YRDI IDGFVPPSTS+APMFP Y+N+  WDDF
Sbjct: 421  DNNNSDPMVVDSGNNHVPPEVAGPRGGGYRDIYIDGFVPPSTSVAPMFPCYENTLEWDDF 480

Query: 715  GEVINPDDYVIKEENMDQPFMQ-DGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCLL 542
            GEVINPDDYVIK+E+M+Q  M   GD+ G+LDE  A LILD+ PSKVVS E TVQVKC L
Sbjct: 481  GEVINPDDYVIKDEDMNQIAMHGGGDINGKLDEGAAGLILDTKPSKVVSDERTVQVKCSL 540

Query: 541  VYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESI 362
            VYMDFEGRSDGRSIK+IL+HVAPLKLVLVHGSAEATEHLKQHCLKHVCPHV APQI+E+I
Sbjct: 541  VYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVSAPQIDETI 600

Query: 361  DVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHKS 182
            DVTSDLCAYKV LSEKLMSNVLFKKLG+YEV+WVDA VGKTE+D            PHKS
Sbjct: 601  DVTSDLCAYKVLLSEKLMSNVLFKKLGDYEVAWVDAVVGKTESDTLSVLPVSEAAPPHKS 660

Query: 181  VLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEGP 2
            VLVGD+K+AD KQFL+SKGVQ EF+ GALRCGE++TLRKVGD +QKGGG+G+QQIVIEGP
Sbjct: 661  VLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDATQKGGGSGAQQIVIEGP 720


>ref|XP_002330904.1| predicted protein [Populus trichocarpa]
          Length = 740

 Score = 1107 bits (2864), Expect = 0.0
 Identities = 551/721 (76%), Positives = 625/721 (86%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPL GV+NENPLSYLVS+DGFNFL+DCGWNDHFD +LLQPL++VAS IDAVLL
Sbjct: 1    MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASKIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            S+ D +HLGALP+AMKQ GL+APV++TEPVYRLGLLTMYD   SRK VSEFDLF+LDDID
Sbjct: 61   SYGDMLHLGALPFAMKQFGLNAPVFSTEPVYRLGLLTMYDQSFSRKAVSEFDLFSLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ   RL YSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121  SAFQNFTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT LESF RPAVLITDAYNALN+QPSR+QRD+ FL+ I+KTL   G VLLPVD+AG
Sbjct: 181  RHLNGTVLESFYRPAVLITDAYNALNSQPSRQQRDKQFLETILKTLEGGGNVLLPVDSAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE+LL+LEQ W Q  L YP+FFL+YVSSST+DY KSFLEWMSDSIAKSFE +RDN FL
Sbjct: 241  RVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEWMSDSIAKSFETSRDNAFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            +KHVTLL++K EL+    GPK+VLAS+ASLEAGFSHDIF +WA D +NL+LFTERGQFGT
Sbjct: 301  MKHVTLLISKDELDNASTGPKVVLASVASLEAGFSHDIFAEWAADVKNLVLFTERGQFGT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+S+R+PLVG+EL AYEEEQ R K+EE L+ASLIKEEES V+H 
Sbjct: 361  LARMLQADPPPKAVKMTMSRRVPLVGDELIAYEEEQKRLKREEELKASLIKEEESKVSHG 420

Query: 895  ADPSMDDPMAVDSHDTEG-LSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
             D ++ DPM +DS +T   L   G   S +RDILIDGFVPPSTS+APMFPFY+NS  WD+
Sbjct: 421  PDNNLSDPMVIDSGNTHSPLDVVGSRGSGHRDILIDGFVPPSTSVAPMFPFYENSLEWDE 480

Query: 718  FGEVINPDDYVIKEENMDQPFMQDG-DL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINPDDYV+++E+MDQ  M  G D+ G+LDE +ASLILD+ PSKVVS+ELTVQVKC 
Sbjct: 481  FGEVINPDDYVVQDEDMDQAAMHVGADIDGKLDEGSASLILDTKPSKVVSNELTVQVKCS 540

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMD+EGRSDGRSIKSIL HVAPLKLV+VHGSAEATEHLKQH L      VYAPQIEE+
Sbjct: 541  LIYMDYEGRSDGRSIKSILTHVAPLKLVMVHGSAEATEHLKQHFLNIKNVQVYAPQIEET 600

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMSNVLFKKLG+YEV+WVDAEVGKTEN M           PHK
Sbjct: 601  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTENGMLSLLPISSPAPPHK 660

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            SVLVGD+KMADFKQFLASKGVQ EF+ GALRCGE++TLRKVG+PSQKGG +G+QQI+IEG
Sbjct: 661  SVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNPSQKGGASGTQQIIIEG 720

Query: 4    P 2
            P
Sbjct: 721  P 721


>ref|XP_006369487.1| Cleavage and polyadenylation specificity factor family protein
            [Populus trichocarpa] gi|550348036|gb|ERP66056.1|
            Cleavage and polyadenylation specificity factor family
            protein [Populus trichocarpa]
          Length = 740

 Score = 1107 bits (2862), Expect = 0.0
 Identities = 551/721 (76%), Positives = 625/721 (86%), Gaps = 4/721 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPL GV+NENPLSYLVS+DGFNFL+DCGWNDHFD +LLQPL++VAS IDAVLL
Sbjct: 1    MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSKVASKIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            S+ D +HLGALP+AMKQ GL+APV++TEPVYRLGLLTMYD   SRK VSEFDLF+LDDID
Sbjct: 61   SYGDMLHLGALPFAMKQFGLNAPVFSTEPVYRLGLLTMYDQSFSRKAVSEFDLFSLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ   RL YSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121  SAFQNFTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVVYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNGT LESF RPAVLITDAYNALN+QPSR+QRD+ FL+ I+KTL   G VLLPVD+AG
Sbjct: 181  RHLNGTVLESFYRPAVLITDAYNALNSQPSRQQRDKQFLETILKTLEGGGNVLLPVDSAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE+LL+LEQ W Q  L YP+FFL+YVSSST+DY KSFLEWMSDSIAKSFE +RDN FL
Sbjct: 241  RVLELLLILEQFWGQRFLNYPIFFLSYVSSSTIDYIKSFLEWMSDSIAKSFETSRDNAFL 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            +KHVTLL++K EL+    GPK+VLAS+ASLEAGFSHDIF +WA D +NL+LFTERGQFGT
Sbjct: 301  MKHVTLLISKDELDNASTGPKVVLASVASLEAGFSHDIFAEWAADVKNLVLFTERGQFGT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+S+R+PLVG+EL AYEEEQ R K+EE L+ASLIKEEES V+H 
Sbjct: 361  LARMLQADPPPKAVKMTMSRRVPLVGDELIAYEEEQKRLKREEELKASLIKEEESKVSHG 420

Query: 895  ADPSMDDPMAVDSHDTEG-LSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
             D ++ DPM +DS +T   L   G   S +RDILIDGFVPPSTS+APMFPFY+NS  WD+
Sbjct: 421  PDNNLSDPMVIDSGNTHSPLDVVGSRGSGHRDILIDGFVPPSTSVAPMFPFYENSLEWDE 480

Query: 718  FGEVINPDDYVIKEENMDQPFMQDG-DL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGEVINPDDYV+++E+MDQ  M  G D+ G+LDE +ASLILD+ PSKVVS+ELTVQVKC 
Sbjct: 481  FGEVINPDDYVVQDEDMDQAAMHVGADIDGKLDEGSASLILDTKPSKVVSNELTVQVKCS 540

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            L+YMD+EGRSDGRSIKSIL HVAPLKLV+VHGSAEATEHLKQH L      VYAPQIEE+
Sbjct: 541  LIYMDYEGRSDGRSIKSILTHVAPLKLVMVHGSAEATEHLKQHFLNIKNVQVYAPQIEET 600

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            IDVTSDLCAYKVQLSEKLMSNVLFKKLG+YEV+WVDAEVGKTEN M           PHK
Sbjct: 601  IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTENGMLSLLPISSPAPPHK 660

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEG 5
            SVLVGD+KMADFKQFLASKGVQ EF+ GALRCGE++TLRKVG+PSQKGG +G+QQI+IEG
Sbjct: 661  SVLVGDLKMADFKQFLASKGVQVEFAGGALRCGEYVTLRKVGNPSQKGGTSGTQQIIIEG 720

Query: 4    P 2
            P
Sbjct: 721  P 721


>ref|XP_004308076.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            2-like [Fragaria vesca subsp. vesca]
          Length = 739

 Score = 1106 bits (2860), Expect = 0.0
 Identities = 540/720 (75%), Positives = 617/720 (85%), Gaps = 3/720 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQ+TPLCGV+NENPLSYLVS+DGFN L+DCGWNDHFD +LLQPL+RVAS++DAVLL
Sbjct: 1    MGTSVQITPLCGVYNENPLSYLVSIDGFNLLIDCGWNDHFDPSLLQPLSRVASAVDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALPYA K LGL+APV++TEPVYRLGLLTMYD YLSRKQVSEFDLFTLDDID
Sbjct: 61   SHPDTLHLGALPYAAKHLGLAAPVFSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL  +Q+HHL GKGEGIVI+PHVAGHLLGGT+WKITKDGEDVIYAVDFNHRKE
Sbjct: 121  SAFQNVTRLTNAQHHHLPGKGEGIVISPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNALNNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTAG 1433
             HLNG    SFVRPAVLITDAYNALNNQP RRQ+D++  + I KTLRS G VLLPVDTAG
Sbjct: 181  KHLNGINQSSFVRPAVLITDAYNALNNQPYRRQKDRELTETIKKTLRSQGNVLLPVDTAG 240

Query: 1432 RALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPFL 1253
            R LE+L +LE  W +  L +P++FLTYV+SST+DY K+FLEWMSD++AKSFE TRDN F+
Sbjct: 241  RVLELLQILESCWNEESLPFPIYFLTYVASSTIDYVKNFLEWMSDAMAKSFETTRDNAFI 300

Query: 1252 LKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFGT 1073
            LK V LLVNKSEL+  P+GPK+VLASMASLEAGFSHDIFV+WATD +NL+ FTER QFGT
Sbjct: 301  LKRVKLLVNKSELDNAPEGPKVVLASMASLEAGFSHDIFVEWATDAKNLVFFTERAQFGT 360

Query: 1072 LARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAHS 896
            LARMLQADPPPKAVK T+SKRIPLVGEEL AYEEEQNR KKEEAL+ASLIKEEE   +H 
Sbjct: 361  LARMLQADPPPKAVKVTMSKRIPLVGEELIAYEEEQNRIKKEEALKASLIKEEELKASHG 420

Query: 895  ADPSMDDPMAVDSHDTEGLSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDDF 716
             D SM DP+ +D+   + L D G      RDILIDGF PPSTS+APMFPFY+N++ W+D+
Sbjct: 421  TDVSMSDPLVIDTSIAKSLPDVGPRGGGCRDILIDGFTPPSTSVAPMFPFYENNSEWEDY 480

Query: 715  GEVINPDDYVIKEENMDQ-PFMQDGDL-GRLDEATASLILDSTPSKVVSSELTVQVKCLL 542
            GEVINPDDYVIK+E+M+Q   +  GD+ G++DEA ASLILDS PSKVVSSELTV VKC L
Sbjct: 481  GEVINPDDYVIKDEDMNQGSMLVGGDMDGKIDEAAASLILDSRPSKVVSSELTVPVKCSL 540

Query: 541  VYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEESI 362
            +YMDFEGRSD RS+KSIL+H+APLKLVLVHG+AEATEHLKQHCLKHVCPHVYAPQ+EE+I
Sbjct: 541  IYMDFEGRSDARSVKSILSHMAPLKLVLVHGTAEATEHLKQHCLKHVCPHVYAPQLEETI 600

Query: 361  DVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHKS 182
            DVTSDLCAYK QLSE LMSN++FKKLGE E++W D+EV KTE++M           PHK 
Sbjct: 601  DVTSDLCAYKAQLSEGLMSNIIFKKLGENEIAWFDSEVRKTEDEMLSLQPCSTPARPHKP 660

Query: 181  VLVGDIKMADFKQFLASKGVQAEFSAGALRCGEFITLRKVGDPSQKGGGTGSQQIVIEGP 2
            +LVGD+KM DFKQFLA  GVQ EF+ GALRCGE +T+RKVGD S KGGG  SQQIVIEGP
Sbjct: 661  ILVGDLKMGDFKQFLADNGVQVEFAGGALRCGEHVTIRKVGDASHKGGGASSQQIVIEGP 720


>ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata]
            gi|297317917|gb|EFH48339.1| CPSF100 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 739

 Score = 1097 bits (2836), Expect = 0.0
 Identities = 541/722 (74%), Positives = 631/722 (87%), Gaps = 5/722 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPL GV+NENPLSYLVS+DGFNFL+DCGWND FD +LL+PL+RVASSIDAVLL
Sbjct: 1    MGTSVQVTPLSGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASSIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+HLGALPYAMKQLGLSAPVYATEPV+RLGLLTMYD +LSRKQVS+FDLFTLDDID
Sbjct: 61   SHPDTLHLGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQN+HLSGKGEGIVIAPHVAGH+LGG+IW+ITKDGEDVIYAVD+NHRKE
Sbjct: 121  SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNAL-NNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTA 1436
             HLNGT L+SFVRPAVLITDAY+AL  NQ +R+QRD++FLD I K L   G VLLPVDTA
Sbjct: 181  RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 1435 GRALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPF 1256
            GR LE+LL+LEQHW+Q   ++P++FLTYVSSST+DY KSFLEWMSDSI+KSFE +RDN F
Sbjct: 241  GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 1255 LLKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFG 1076
            LL+HVTLL+NK++L+  P GPK+VLASMASLEAGF+ +IFV+WA DPRNL+LFTE GQFG
Sbjct: 301  LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 1075 TLARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAH 899
            TLARMLQ+ PPPK VK T+SKR+PL GEEL AYEEEQNR K+EEALRASL+KEEE+  +H
Sbjct: 361  TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 898  SADPSMDDPMAVDSHDTEGLSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
             +D +  +PM +D+  T  +   G H  AY+DILIDGFVPPS+S+APMFPFYDN++ WDD
Sbjct: 421  GSDDNSSEPMVIDTKTTHDVV--GSHGPAYKDILIDGFVPPSSSVAPMFPFYDNTSEWDD 478

Query: 718  FGEVINPDDYVIKEENMDQPFMQD-GDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGE+INPDDYVIK+E+MD+  M + GD+ GRLDEATASL+LD+ PSKV+S+EL V V C 
Sbjct: 479  FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVISNELIVTVSCS 538

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            LV MD+EGRSDGRSIKS++AHV+PLKLVLVH  AEATEHLKQHCL ++CPHVYAPQIEE+
Sbjct: 539  LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 598

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            +DVTSDLCAYKVQLSEKLMSNV+FKKLG+ EV+WVD+EVGKTE+DM           PHK
Sbjct: 599  VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTESDMRSLLPMSGAASPHK 658

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFS-AGALRCGEFITLRKVGDPSQKGGGTGSQQIVIE 8
             VLVGD+K+ADFKQFL+SKGVQ EF+  GALRCGE++TLRKVG   QKGG +G QQI+IE
Sbjct: 659  PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 718

Query: 7    GP 2
            GP
Sbjct: 719  GP 720


>ref|NP_197776.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis
            thaliana] gi|18203240|sp|Q9LKF9.2|CPSF2_ARATH RecName:
            Full=Cleavage and polyadenylation specificity factor
            subunit 2; AltName: Full=Cleavage and polyadenylation
            specificity factor 100 kDa subunit; Short=AtCPSF100;
            Short=CPSF 100 kDa subunit; AltName: Full=Protein EMBRYO
            DEFECTIVE 1265; AltName: Full=Protein ENHANCED SILENCING
            PHENOTYPE 5 gi|10176855|dbj|BAB10061.1| cleavage and
            polyadenylation specificity factor [Arabidopsis thaliana]
            gi|14334618|gb|AAK59487.1| putative cleavage and
            polyadenylation specificity factor [Arabidopsis thaliana]
            gi|28393921|gb|AAO42368.1| putative cleavage and
            polyadenylation specificity factor [Arabidopsis thaliana]
            gi|332005845|gb|AED93228.1| cleavage and polyadenylation
            specificity factor 100 [Arabidopsis thaliana]
          Length = 739

 Score = 1096 bits (2834), Expect = 0.0
 Identities = 539/722 (74%), Positives = 631/722 (87%), Gaps = 5/722 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFL+DCGWND FD +LL+PL+RVAS+IDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+H+GALPYAMKQLGLSAPVYATEPV+RLGLLTMYD +LSRKQVS+FDLFTLDDID
Sbjct: 61   SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQN+HLSGKGEGIVIAPHVAGH+LGG+IW+ITKDGEDVIYAVD+NHRKE
Sbjct: 121  SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNAL-NNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTA 1436
             HLNGT L+SFVRPAVLITDAY+AL  NQ +R+QRD++FLD I K L   G VLLPVDTA
Sbjct: 181  RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 1435 GRALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPF 1256
            GR LE+LL+LEQHW+Q   ++P++FLTYVSSST+DY KSFLEWMSDSI+KSFE +RDN F
Sbjct: 241  GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 1255 LLKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFG 1076
            LL+HVTLL+NK++L+  P GPK+VLASMASLEAGF+ +IFV+WA DPRNL+LFTE GQFG
Sbjct: 301  LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 1075 TLARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAH 899
            TLARMLQ+ PPPK VK T+SKR+PL GEEL AYEEEQNR K+EEALRASL+KEEE+  +H
Sbjct: 361  TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 898  SADPSMDDPMAVDSHDTEGLSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
             +D +  +PM +D+  T  +   G H  AY+DILIDGFVPPS+S+APMFP+YDN++ WDD
Sbjct: 421  GSDDNSSEPMIIDTKTTHDVI--GSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 478

Query: 718  FGEVINPDDYVIKEENMDQPFMQD-GDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGE+INPDDYVIK+E+MD+  M + GD+ GRLDEATASL+LD+ PSKV+S+EL V V C 
Sbjct: 479  FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 538

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            LV MD+EGRSDGRSIKS++AHV+PLKLVLVH  AEATEHLKQHCL ++CPHVYAPQIEE+
Sbjct: 539  LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 598

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            +DVTSDLCAYKVQLSEKLMSNV+FKKLG+ EV+WVD+EVGKTE DM           PHK
Sbjct: 599  VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 658

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFS-AGALRCGEFITLRKVGDPSQKGGGTGSQQIVIE 8
             VLVGD+K+ADFKQFL+SKGVQ EF+  GALRCGE++TLRKVG   QKGG +G QQI+IE
Sbjct: 659  PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 718

Query: 7    GP 2
            GP
Sbjct: 719  GP 720


>gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity factor 100 kDa subunit
            [Arabidopsis thaliana]
          Length = 739

 Score = 1095 bits (2832), Expect = 0.0
 Identities = 539/722 (74%), Positives = 630/722 (87%), Gaps = 5/722 (0%)
 Frame = -3

Query: 2152 MGTSVQVTPLCGVFNENPLSYLVSVDGFNFLVDCGWNDHFDINLLQPLARVASSIDAVLL 1973
            MGTSVQVTPLCGV+NENPLSYLVS+DGFNFL+DCGWND FD +LL+PL RVAS+IDAVLL
Sbjct: 1    MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLPRVASTIDAVLL 60

Query: 1972 SHPDTMHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDHYLSRKQVSEFDLFTLDDID 1793
            SHPDT+H+GALPYAMKQLGLSAPVYATEPV+RLGLLTMYD +LSRKQVS+FDLFTLDDID
Sbjct: 61   SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120

Query: 1792 SAFQRVERLNYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKE 1613
            SAFQ V RL YSQN+HLSGKGEGIVIAPHVAGH+LGG+IW+ITKDGEDVIYAVD+NHRKE
Sbjct: 121  SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180

Query: 1612 MHLNGTGLESFVRPAVLITDAYNAL-NNQPSRRQRDQDFLDAIMKTLRSDGKVLLPVDTA 1436
             HLNGT L+SFVRPAVLITDAY+AL  NQ +R+QRD++FLD I K L   G VLLPVDTA
Sbjct: 181  RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240

Query: 1435 GRALEILLMLEQHWAQHHLTYPVFFLTYVSSSTVDYAKSFLEWMSDSIAKSFEQTRDNPF 1256
            GR LE+LL+LEQHW+Q   ++P++FLTYVSSST+DY KSFLEWMSDSI+KSFE +RDN F
Sbjct: 241  GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300

Query: 1255 LLKHVTLLVNKSELEKVPDGPKIVLASMASLEAGFSHDIFVDWATDPRNLILFTERGQFG 1076
            LL+HVTLL+NK++L+  P GPK+VLASMASLEAGF+ +IFV+WA DPRNL+LFTE GQFG
Sbjct: 301  LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360

Query: 1075 TLARMLQADPPPKAVKATISKRIPLVGEELAAYEEEQNR-KKEEALRASLIKEEESSVAH 899
            TLARMLQ+ PPPK VK T+SKR+PL GEEL AYEEEQNR K+EEALRASL+KEEE+  +H
Sbjct: 361  TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420

Query: 898  SADPSMDDPMAVDSHDTEGLSDGGLHCSAYRDILIDGFVPPSTSIAPMFPFYDNSAVWDD 719
             +D +  +PM +D+  T  +   G H  AY+DILIDGFVPPS+S+APMFP+YDN++ WDD
Sbjct: 421  GSDDNSSEPMIIDTKTTHDVV--GSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 478

Query: 718  FGEVINPDDYVIKEENMDQPFMQD-GDL-GRLDEATASLILDSTPSKVVSSELTVQVKCL 545
            FGE+INPDDYVIK+E+MD+  M + GD+ GRLDEATASL+LD+ PSKV+S+EL V V C 
Sbjct: 479  FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 538

Query: 544  LVYMDFEGRSDGRSIKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEES 365
            LV MD+EGRSDGRSIKS++AHV+PLKLVLVH  AEATEHLKQHCL ++CPHVYAPQIEE+
Sbjct: 539  LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 598

Query: 364  IDVTSDLCAYKVQLSEKLMSNVLFKKLGEYEVSWVDAEVGKTENDMXXXXXXXXXXXPHK 185
            +DVTSDLCAYKVQLSEKLMSNV+FKKLG+ EV+WVD+EVGKTE DM           PHK
Sbjct: 599  VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 658

Query: 184  SVLVGDIKMADFKQFLASKGVQAEFS-AGALRCGEFITLRKVGDPSQKGGGTGSQQIVIE 8
             VLVGD+K+ADFKQFL+SKGVQ EF+  GALRCGE++TLRKVG   QKGG +G QQI+IE
Sbjct: 659  PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQKGGASGPQQILIE 718

Query: 7    GP 2
            GP
Sbjct: 719  GP 720