BLASTX nr result
ID: Rheum21_contig00005170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00005170
(289 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006584077.1| PREDICTED: tRNA wybutosine-synthesizing prot... 118 7e-25
gb|EMJ15753.1| hypothetical protein PRUPE_ppa000678mg [Prunus pe... 116 3e-24
gb|ESW25941.1| hypothetical protein PHAVU_003G078700g, partial [... 114 1e-23
ref|XP_004239703.1| PREDICTED: tRNA wybutosine-synthesizing prot... 114 2e-23
gb|EXB36806.1| tRNA wybutosine-synthesizing protein [Morus notab... 113 2e-23
ref|XP_006396676.1| hypothetical protein EUTSA_v10028391mg [Eutr... 113 2e-23
ref|XP_006467437.1| PREDICTED: tRNA wybutosine-synthesizing prot... 112 4e-23
ref|XP_006467436.1| PREDICTED: tRNA wybutosine-synthesizing prot... 112 4e-23
ref|XP_006286991.1| hypothetical protein CARUB_v10000136mg [Caps... 112 4e-23
emb|CBI23243.3| unnamed protein product [Vitis vinifera] 112 4e-23
ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing prot... 112 4e-23
ref|XP_006449727.1| hypothetical protein CICLE_v10018338mg, part... 111 9e-23
gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00... 109 4e-22
ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arab... 109 4e-22
ref|NP_567268.2| Met-10+ like family protein / kelch repeat-cont... 109 4e-22
ref|XP_006345835.1| PREDICTED: tRNA wybutosine-synthesizing prot... 107 1e-21
ref|XP_002304908.2| Met-10++ like family protein [Populus tricho... 107 2e-21
ref|XP_006855879.1| hypothetical protein AMTR_s00037p00133600 [A... 107 2e-21
gb|EOY28694.1| Met-10+ like family protein / kelch repeat-contai... 106 3e-21
ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing prot... 106 3e-21
>ref|XP_006584077.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Glycine
max]
Length = 1075
Score = 118 bits (296), Expect = 7e-25
Identities = 59/100 (59%), Positives = 73/100 (73%), Gaps = 4/100 (4%)
Frame = +1
Query: 1 RRMEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFS 180
+RMEFEKRKAAT+A +++T DKSPKG++DA I+PLL TLN +PS+FTTSSCSGRISI +
Sbjct: 32 KRMEFEKRKAATLASLSSTESDKSPKGSLDAAIVPLLNTLNQNPSYFTTSSCSGRISILA 91
Query: 181 HP----XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
P W+F++HDPADP SVL LLFPS
Sbjct: 92 QPLSLSDSPNPKKKARGGTWLFVSHDPADPDSVLSLLFPS 131
>gb|EMJ15753.1| hypothetical protein PRUPE_ppa000678mg [Prunus persica]
Length = 1037
Score = 116 bits (291), Expect = 3e-24
Identities = 59/96 (61%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
MEFEKRKAAT+A + + DKSPKG +DAPI+PLL TLN HP++FTTSSCSGRISI S P
Sbjct: 1 MEFEKRKAATLASLRSEETDKSPKGTVDAPIIPLLNTLNSHPNYFTTSSCSGRISILSQP 60
Query: 187 --XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W+FITHDPADP SVL+ LF S
Sbjct: 61 THSKLKTKKKALGGTWLFITHDPADPDSVLNRLFRS 96
>gb|ESW25941.1| hypothetical protein PHAVU_003G078700g, partial [Phaseolus
vulgaris]
Length = 1053
Score = 114 bits (286), Expect = 1e-23
Identities = 57/98 (58%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Frame = +1
Query: 1 RRMEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFS 180
+ MEFEKRKAA +A + +T DKSPKG++DAPI+PL+ LN +PS+FTTSSCSGRISI S
Sbjct: 13 KTMEFEKRKAAALASLISTELDKSPKGSLDAPIVPLVNALNQNPSYFTTSSCSGRISILS 72
Query: 181 HP--XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
P W+F++HDPADP SVL LLFPS
Sbjct: 73 QPLSESPNPKKKARGGTWLFVSHDPADPDSVLSLLFPS 110
>ref|XP_004239703.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Solanum
lycopersicum]
Length = 1038
Score = 114 bits (284), Expect = 2e-23
Identities = 57/97 (58%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSH- 183
MEFEKRK A ++ M + PDKSPKGNIDAPI+PLL TLN HPS+FTTSSCSGRISI S
Sbjct: 1 MEFEKRKLAALSSMNSPEPDKSPKGNIDAPIIPLLNTLNSHPSYFTTSSCSGRISILSQP 60
Query: 184 --PXXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
P W+FI+HDP +P +L LFPS
Sbjct: 61 ITPITNPTKKKAKGGKWVFISHDPIEPHLILSHLFPS 97
>gb|EXB36806.1| tRNA wybutosine-synthesizing protein [Morus notabilis]
Length = 1028
Score = 113 bits (283), Expect = 2e-23
Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
MEFEKRK AT+A + +T+ DKSPKG +D PI+PL+ +N HPS+FTTSSCSGRISI S P
Sbjct: 1 MEFEKRKEATLASLDSTATDKSPKGTLDTPIIPLINAINAHPSYFTTSSCSGRISILSQP 60
Query: 187 ----XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W+FITHD ADP +VL+LLFPS
Sbjct: 61 TPTAFSTNPKKKASGGSWLFITHDRADPDTVLNLLFPS 98
>ref|XP_006396676.1| hypothetical protein EUTSA_v10028391mg [Eutrema salsugineum]
gi|557097693|gb|ESQ38129.1| hypothetical protein
EUTSA_v10028391mg [Eutrema salsugineum]
Length = 1007
Score = 113 bits (283), Expect = 2e-23
Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
MEFEKRKAAT+A + ++ DKSPKG +D PI+PLL+T+N HPS+FTTSSCSGRISI S P
Sbjct: 1 MEFEKRKAATLASIRSSVTDKSPKGYLDEPIVPLLETINHHPSYFTTSSCSGRISILSQP 60
Query: 187 ---XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W++ITHDPADP V+ LLFPS
Sbjct: 61 KPESNASTKKKARGGSWLYITHDPADPDLVISLLFPS 97
>ref|XP_006467437.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like isoform
X2 [Citrus sinensis]
Length = 950
Score = 112 bits (281), Expect = 4e-23
Identities = 54/92 (58%), Positives = 68/92 (73%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
M FE+RKAAT+A +++++ DKSPKG +D PI+PLL +N HP+++TTSSCSGRISIFSHP
Sbjct: 1 MSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHP 60
Query: 187 XXXXXXXXXXXXXWIFITHDPADPASVLHLLF 282
W+FITHDPAD SVL LLF
Sbjct: 61 -----VNKPKGGTWLFITHDPADVDSVLSLLF 87
>ref|XP_006467436.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like isoform
X1 [Citrus sinensis]
Length = 1019
Score = 112 bits (281), Expect = 4e-23
Identities = 54/92 (58%), Positives = 68/92 (73%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
M FE+RKAAT+A +++++ DKSPKG +D PI+PLL +N HP+++TTSSCSGRISIFSHP
Sbjct: 1 MSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHP 60
Query: 187 XXXXXXXXXXXXXWIFITHDPADPASVLHLLF 282
W+FITHDPAD SVL LLF
Sbjct: 61 -----VNKPKGGTWLFITHDPADVDSVLSLLF 87
>ref|XP_006286991.1| hypothetical protein CARUB_v10000136mg [Capsella rubella]
gi|482555697|gb|EOA19889.1| hypothetical protein
CARUB_v10000136mg [Capsella rubella]
Length = 994
Score = 112 bits (281), Expect = 4e-23
Identities = 56/97 (57%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
M+FEKRKAAT+A + ++ DKSPKG +D PI+PLL+T+N HPS+FTTSSCSGRISI S P
Sbjct: 1 MDFEKRKAATLASIRSSVTDKSPKGYLDEPIIPLLETINHHPSYFTTSSCSGRISILSQP 60
Query: 187 ---XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W++ITHDPADP V+ LLFPS
Sbjct: 61 KPKLNDSTKKKARGGSWLYITHDPADPELVVSLLFPS 97
>emb|CBI23243.3| unnamed protein product [Vitis vinifera]
Length = 1013
Score = 112 bits (281), Expect = 4e-23
Identities = 59/96 (61%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSH- 183
MEFEKRKAAT+A M +T PDKSPKG ID I+PLL +N H S+FTTSSCSGRISI S
Sbjct: 1 MEFEKRKAATLASMGSTEPDKSPKGTIDRHIVPLLSAINRHNSYFTTSSCSGRISILSQP 60
Query: 184 -PXXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
P W+FITHD ADP SVL LLFP+
Sbjct: 61 SPAATNAHKKARGGSWLFITHDLADPNSVLALLFPT 96
>ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Vitis
vinifera]
Length = 1018
Score = 112 bits (281), Expect = 4e-23
Identities = 59/96 (61%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSH- 183
MEFEKRKAAT+A M +T PDKSPKG ID I+PLL +N H S+FTTSSCSGRISI S
Sbjct: 1 MEFEKRKAATLASMGSTEPDKSPKGTIDRHIVPLLSAINRHNSYFTTSSCSGRISILSQP 60
Query: 184 -PXXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
P W+FITHD ADP SVL LLFP+
Sbjct: 61 SPAATNAHKKARGGSWLFITHDLADPNSVLALLFPT 96
>ref|XP_006449727.1| hypothetical protein CICLE_v10018338mg, partial [Citrus clementina]
gi|557552338|gb|ESR62967.1| hypothetical protein
CICLE_v10018338mg, partial [Citrus clementina]
Length = 1009
Score = 111 bits (278), Expect = 9e-23
Identities = 53/92 (57%), Positives = 67/92 (72%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
M FE+RKAAT+A + +++ DKSPKG +D PI+PLL +N HP+++TTSSCSGR+SIFSHP
Sbjct: 29 MSFEQRKAATLASLRSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRVSIFSHP 88
Query: 187 XXXXXXXXXXXXXWIFITHDPADPASVLHLLF 282
W+FITHDPAD SVL LLF
Sbjct: 89 -----VNKPKGGTWLFITHDPADVDSVLSLLF 115
>gb|AAD48952.1|AF149414_1 contains similarity to Pfam family PF00145 (C-5 cytosine-specific
DNA methylase); score=10.4. E=0.051, N=1 [Arabidopsis
thaliana] gi|7267225|emb|CAB80832.1| AT4g04670
[Arabidopsis thaliana]
Length = 977
Score = 109 bits (272), Expect = 4e-22
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
M+FEKRKAAT+A + ++ DKSPKG +D PI+PLL+T+N HPS+FTTSSCSGRISI S P
Sbjct: 1 MDFEKRKAATLASIRSSVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQP 60
Query: 187 ---XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W++ITHDPAD V+ LLFPS
Sbjct: 61 KPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPS 97
>ref|XP_002872703.1| hypothetical protein ARALYDRAFT_490107 [Arabidopsis lyrata subsp.
lyrata] gi|297318540|gb|EFH48962.1| hypothetical protein
ARALYDRAFT_490107 [Arabidopsis lyrata subsp. lyrata]
Length = 996
Score = 109 bits (272), Expect = 4e-22
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
M+FEKRKAAT+A + ++ DKSPKG +D PI+PLL+T+N HPS+FTTSSCSGRISI S P
Sbjct: 1 MDFEKRKAATLASIRSSVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQP 60
Query: 187 ---XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W++ITHDPAD V+ LLFPS
Sbjct: 61 KPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPS 97
>ref|NP_567268.2| Met-10+ like family protein / kelch repeat-containing protein
[Arabidopsis thaliana]
gi|75162488|sp|Q8W4K1.1|TYW23_ARATH RecName: Full=tRNA
wybutosine-synthesizing protein 2/3/4; Includes:
RecName: Full=tRNA wybutosine-synthesizing protein 3
homolog; Includes: RecName: Full=tRNA
wybutosine-synthesizing protein 2 homolog
gi|17064868|gb|AAL32588.1| Unknown protein [Arabidopsis
thaliana] gi|30725408|gb|AAP37726.1| At4g04670
[Arabidopsis thaliana] gi|332657010|gb|AEE82410.1|
Met-10+ like family protein / kelch repeat-containing
protein [Arabidopsis thaliana]
Length = 995
Score = 109 bits (272), Expect = 4e-22
Identities = 55/97 (56%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
M+FEKRKAAT+A + ++ DKSPKG +D PI+PLL+T+N HPS+FTTSSCSGRISI S P
Sbjct: 1 MDFEKRKAATLASIRSSVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQP 60
Query: 187 ---XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W++ITHDPAD V+ LLFPS
Sbjct: 61 KPKSNDSTKKKARGGSWLYITHDPADSDLVISLLFPS 97
>ref|XP_006345835.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Solanum
tuberosum]
Length = 1038
Score = 107 bits (268), Expect = 1e-21
Identities = 55/97 (56%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSH- 183
MEFE+RK AT++ M + PDKSPKGNIDAPI+PLL TLN H S+FTTSSCSGRISI S
Sbjct: 1 MEFERRKLATLSSMNSPEPDKSPKGNIDAPIIPLLNTLNSHASYFTTSSCSGRISILSQP 60
Query: 184 --PXXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
P W+FI+HDP + +L LFPS
Sbjct: 61 IIPITNPTKKKAKGGKWVFISHDPIELHLILSHLFPS 97
>ref|XP_002304908.2| Met-10++ like family protein [Populus trichocarpa]
gi|550340091|gb|EEE85419.2| Met-10++ like family protein
[Populus trichocarpa]
Length = 1030
Score = 107 bits (266), Expect = 2e-21
Identities = 52/98 (53%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSH- 183
MEFEKRKAAT++ +A++ DKSPKG +D ++PL+ T+N HPS+FTTSSCSGR+SI S
Sbjct: 1 MEFEKRKAATLSSLASSKTDKSPKGTVDTHLIPLINTINSHPSYFTTSSCSGRVSILSQP 60
Query: 184 ---PXXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
P W+FI+HD A+P S+L LLFPS
Sbjct: 61 KWTPTPPTSKKKARGGSWLFISHDLANPNSLLPLLFPS 98
>ref|XP_006855879.1| hypothetical protein AMTR_s00037p00133600 [Amborella trichopoda]
gi|548859700|gb|ERN17346.1| hypothetical protein
AMTR_s00037p00133600 [Amborella trichopoda]
Length = 1112
Score = 107 bits (266), Expect = 2e-21
Identities = 50/92 (54%), Positives = 65/92 (70%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
MEFEKRK +A +A+ DKSPKG++DAPIL LL+T+N PS+FTTSSCSGRISI HP
Sbjct: 1 MEFEKRKGMALAALASELGDKSPKGSVDAPILLLLRTINAIPSYFTTSSCSGRISILLHP 60
Query: 187 XXXXXXXXXXXXXWIFITHDPADPASVLHLLF 282
W+F++H+PA+P +V+ LLF
Sbjct: 61 HTITKKNKKKAGDWLFVSHEPANPEAVVRLLF 92
>gb|EOY28694.1| Met-10+ like family protein / kelch repeat-containing protein,
putative isoform 1 [Theobroma cacao]
Length = 1048
Score = 106 bits (265), Expect = 3e-21
Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
MEF+KRKA+T+A +++ DKSPKG +D PI+PLL +N HPS+FTTSSCSGRISI S P
Sbjct: 1 MEFDKRKASTLASLSSNETDKSPKGTLDTPIIPLLDAINNHPSYFTTSSCSGRISILSQP 60
Query: 187 -----XXXXXXXXXXXXXWIFITHDPADPASVLHLLF 282
W+FITHD ADP SV+ LLF
Sbjct: 61 KPDPNSNNPTKKKARGGTWLFITHDMADPDSVISLLF 97
>ref|XP_004155603.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Cucumis
sativus]
Length = 1035
Score = 106 bits (265), Expect = 3e-21
Identities = 53/100 (53%), Positives = 68/100 (68%), Gaps = 6/100 (6%)
Frame = +1
Query: 7 MEFEKRKAATIAVMAATSPDKSPKGNIDAPILPLLKTLNLHPSFFTTSSCSGRISIFSHP 186
MEFEKRKAAT+A + +T DKSPKG++D PI+PL+ TLN HPS+FTTSSCSGRISI + P
Sbjct: 1 MEFEKRKAATMASLGSTETDKSPKGSLDTPIIPLINTLNSHPSYFTTSSCSGRISILAQP 60
Query: 187 ------XXXXXXXXXXXXXWIFITHDPADPASVLHLLFPS 288
W+F++H+ A+P SV+ LLF S
Sbjct: 61 ISTTSAAAPKPKKKALGGSWLFVSHEFAEPNSVIDLLFRS 100