BLASTX nr result

ID: Rheum21_contig00005149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005149
         (692 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase ...    63   8e-08
ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase ...    62   2e-07
ref|XP_002325493.1| hypothetical protein POPTR_0019s08760g [Popu...    60   5e-07
emb|CBI25343.3| unnamed protein product [Vitis vinifera]               59   1e-06
gb|EOY20183.1| Ubiquinol-cytochrome c reductase complex 6.7 kDa ...    56   9e-06

>ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa protein
           [Vitis vinifera]
          Length = 59

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 30/57 (52%), Positives = 38/57 (66%)
 Frame = -3

Query: 567 ATGSRMMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEEK 397
           ++GS M KFLKPS+R QP DIQ            A+++VQPFDW+KKTF EKP  E+
Sbjct: 2   SSGSAMFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDWLKKTFLEKPDPEE 58


>ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa
           protein-like [Cucumis sativus]
           gi|449529780|ref|XP_004171876.1| PREDICTED:
           ubiquinol-cytochrome c reductase complex 6.7 kDa
           protein-like [Cucumis sativus]
          Length = 57

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 28/53 (52%), Positives = 33/53 (62%)
 Frame = -3

Query: 558 SRMMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEE 400
           S + KFL P  R Q TDIQ            A+W++QPFDWIKKTFFEKP E+
Sbjct: 5   SSLFKFLSPGRRFQSTDIQAAAGWGVAAATTALWVIQPFDWIKKTFFEKPQEK 57


>ref|XP_002325493.1| hypothetical protein POPTR_0019s08760g [Populus trichocarpa]
           gi|118482907|gb|ABK93367.1| unknown [Populus
           trichocarpa] gi|118483491|gb|ABK93644.1| unknown
           [Populus trichocarpa] gi|118487244|gb|ABK95450.1|
           unknown [Populus trichocarpa]
           gi|118488463|gb|ABK96046.1| unknown [Populus
           trichocarpa] gi|222862368|gb|EEE99874.1| hypothetical
           protein POPTR_0019s08760g [Populus trichocarpa]
          Length = 59

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 29/52 (55%), Positives = 33/52 (63%)
 Frame = -3

Query: 552 MMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEEK 397
           M KFL P +RLQ TDIQ            A+W+VQPFDWIKKTFFEK   E+
Sbjct: 7   MFKFLSPRLRLQSTDIQTAAFWGVAAGTTALWLVQPFDWIKKTFFEKANTEE 58


>emb|CBI25343.3| unnamed protein product [Vitis vinifera]
          Length = 53

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 34/52 (65%)
 Frame = -3

Query: 552 MMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEEK 397
           M KFLKPS+R QP DIQ            A+++VQPFDW+KKTF EKP  E+
Sbjct: 1   MFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDWLKKTFLEKPDPEE 52


>gb|EOY20183.1| Ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Theobroma
           cacao]
          Length = 57

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = -3

Query: 552 MMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKP 409
           M KFL+P +R QP DIQ             +W++QPFDW+K+TF EKP
Sbjct: 7   MFKFLRPRLRPQPGDIQAAALWGVAATTTGLWLIQPFDWLKRTFLEKP 54


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