BLASTX nr result
ID: Rheum21_contig00005149
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rheum21_contig00005149 (692 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase ... 63 8e-08 ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase ... 62 2e-07 ref|XP_002325493.1| hypothetical protein POPTR_0019s08760g [Popu... 60 5e-07 emb|CBI25343.3| unnamed protein product [Vitis vinifera] 59 1e-06 gb|EOY20183.1| Ubiquinol-cytochrome c reductase complex 6.7 kDa ... 56 9e-06 >ref|XP_002280954.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Vitis vinifera] Length = 59 Score = 63.2 bits (152), Expect = 8e-08 Identities = 30/57 (52%), Positives = 38/57 (66%) Frame = -3 Query: 567 ATGSRMMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEEK 397 ++GS M KFLKPS+R QP DIQ A+++VQPFDW+KKTF EKP E+ Sbjct: 2 SSGSAMFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDWLKKTFLEKPDPEE 58 >ref|XP_004138393.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa protein-like [Cucumis sativus] gi|449529780|ref|XP_004171876.1| PREDICTED: ubiquinol-cytochrome c reductase complex 6.7 kDa protein-like [Cucumis sativus] Length = 57 Score = 62.0 bits (149), Expect = 2e-07 Identities = 28/53 (52%), Positives = 33/53 (62%) Frame = -3 Query: 558 SRMMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEE 400 S + KFL P R Q TDIQ A+W++QPFDWIKKTFFEKP E+ Sbjct: 5 SSLFKFLSPGRRFQSTDIQAAAGWGVAAATTALWVIQPFDWIKKTFFEKPQEK 57 >ref|XP_002325493.1| hypothetical protein POPTR_0019s08760g [Populus trichocarpa] gi|118482907|gb|ABK93367.1| unknown [Populus trichocarpa] gi|118483491|gb|ABK93644.1| unknown [Populus trichocarpa] gi|118487244|gb|ABK95450.1| unknown [Populus trichocarpa] gi|118488463|gb|ABK96046.1| unknown [Populus trichocarpa] gi|222862368|gb|EEE99874.1| hypothetical protein POPTR_0019s08760g [Populus trichocarpa] Length = 59 Score = 60.5 bits (145), Expect = 5e-07 Identities = 29/52 (55%), Positives = 33/52 (63%) Frame = -3 Query: 552 MMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEEK 397 M KFL P +RLQ TDIQ A+W+VQPFDWIKKTFFEK E+ Sbjct: 7 MFKFLSPRLRLQSTDIQTAAFWGVAAGTTALWLVQPFDWIKKTFFEKANTEE 58 >emb|CBI25343.3| unnamed protein product [Vitis vinifera] Length = 53 Score = 58.9 bits (141), Expect = 1e-06 Identities = 28/52 (53%), Positives = 34/52 (65%) Frame = -3 Query: 552 MMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKPAEEK 397 M KFLKPS+R QP DIQ A+++VQPFDW+KKTF EKP E+ Sbjct: 1 MFKFLKPSVRPQPVDIQAAAAWGVAGVTTALYLVQPFDWLKKTFLEKPDPEE 52 >gb|EOY20183.1| Ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Theobroma cacao] Length = 57 Score = 56.2 bits (134), Expect = 9e-06 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = -3 Query: 552 MMKFLKPSMRLQPTDIQXXXXXXXXXXXXAIWIVQPFDWIKKTFFEKP 409 M KFL+P +R QP DIQ +W++QPFDW+K+TF EKP Sbjct: 7 MFKFLRPRLRPQPGDIQAAALWGVAATTTGLWLIQPFDWLKRTFLEKP 54