BLASTX nr result

ID: Rheum21_contig00005068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005068
         (307 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140831.1| PREDICTED: F-box/kelch-repeat protein At3g06...    58   1e-06
ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|35549...    57   2e-06
ref|XP_006470453.1| PREDICTED: F-box/kelch-repeat protein At3g23...    57   3e-06
ref|XP_004307699.1| PREDICTED: F-box/kelch-repeat protein At3g06...    57   3e-06
ref|XP_004305715.1| PREDICTED: F-box/kelch-repeat protein At3g06...    57   3e-06
ref|XP_006586599.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   4e-06
ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncat...    56   6e-06
ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|35551...    56   6e-06
ref|XP_006431461.1| hypothetical protein CICLE_v10003888mg [Citr...    55   7e-06
ref|XP_006425457.1| hypothetical protein CICLE_v10027079mg [Citr...    55   7e-06
ref|XP_004305871.1| PREDICTED: putative F-box protein At3g16210-...    55   7e-06

>ref|XP_004140831.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Cucumis
           sativus] gi|449485606|ref|XP_004157222.1| PREDICTED:
           F-box/kelch-repeat protein At3g06240-like [Cucumis
           sativus]
          Length = 372

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = +3

Query: 144 LVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISVQNPRFLV 281
           L+ IL YLPVK+LL+FRCVCKEW +L+ +P F   H+  + P  L+
Sbjct: 19  LIEILSYLPVKSLLRFRCVCKEWNKLVQNPLFVNAHLEKRIPNSLL 64


>ref|XP_003623087.1| F-box protein [Medicago truncatula] gi|355498102|gb|AES79305.1|
           F-box protein [Medicago truncatula]
          Length = 543

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = +3

Query: 129 ISVDNLVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHI--SVQNPRFLVEYEGRK 299
           + +D +  +L +LPVK+LL+FRCVC  WK LI    F + H+  S+QNPR  V  E R+
Sbjct: 22  LPLDLITELLSFLPVKSLLQFRCVCMSWKILISDSFFVKLHLQRSIQNPRLAVTQESRE 80


>ref|XP_006470453.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Citrus
           sinensis]
          Length = 379

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = +3

Query: 138 DNLVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISV--QNPRFLVEY 287
           D +V IL   PVK+LL+FRCVCK W +L +SPSF  KH+     N R ++ Y
Sbjct: 26  DMVVEILSKFPVKSLLRFRCVCKSWYELFESPSFISKHLKAGNSNTRLILRY 77


>ref|XP_004307699.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 392

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +3

Query: 138 DNLVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISVQNPR 272
           D +V IL  LPVK+L++FRCVCK W  LI  PSFA+ H+S  N +
Sbjct: 18  DAIVSILSKLPVKSLIRFRCVCKSWCALISDPSFARMHLSSMNTK 62


>ref|XP_004305715.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 393

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +3

Query: 120 SDYISVDNLVL-ILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISVQNPRFLVEY 287
           S+ I +D +++ IL  LP K+LL+FRCVCK W+ LI  P F +KH+S  N R    Y
Sbjct: 24  SESIDLDPVIVEILSRLPAKSLLRFRCVCKAWRALISDPYFIRKHLSCINTRVSASY 80


>ref|XP_006586599.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 395

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/43 (55%), Positives = 31/43 (72%)
 Frame = +3

Query: 126 YISVDNLVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHI 254
           Y+  D +V IL  LPVK L++FRCVCK WK +I  PSF +KH+
Sbjct: 9   YVPDDLIVEILSRLPVKDLMRFRCVCKTWKSIIFDPSFVKKHL 51


>ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355510059|gb|AES91201.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 515

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +3

Query: 144 LVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISV 260
           +V IL  LPV++LL+FRCVCK WK LI  P FA+KH+S+
Sbjct: 41  IVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKKHVSI 79


>ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|355510053|gb|AES91195.1|
           F-box protein [Medicago truncatula]
          Length = 607

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +3

Query: 144 LVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISV 260
           +V IL  LPV++LL+FRCVCK WK LI  P FA+KH+S+
Sbjct: 41  IVEILLRLPVRSLLQFRCVCKLWKTLISDPQFAKKHVSI 79


>ref|XP_006431461.1| hypothetical protein CICLE_v10003888mg [Citrus clementina]
           gi|557533583|gb|ESR44701.1| hypothetical protein
           CICLE_v10003888mg [Citrus clementina]
          Length = 353

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
 Frame = +3

Query: 144 LVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISV--QNPRFLVEY 287
           +V IL   PVK+LL+FRCVCK W +L +SPSF  KH+     N R ++ Y
Sbjct: 2   VVEILSKFPVKSLLRFRCVCKSWYELFESPSFISKHLKAGNSNTRLILRY 51


>ref|XP_006425457.1| hypothetical protein CICLE_v10027079mg [Citrus clementina]
           gi|557527447|gb|ESR38697.1| hypothetical protein
           CICLE_v10027079mg [Citrus clementina]
          Length = 358

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/50 (50%), Positives = 33/50 (66%)
 Frame = +3

Query: 138 DNLVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISVQNPRFLVEY 287
           D +V IL  L VK LL+F+CVCK W  LI++PSF  KH+   + R +V Y
Sbjct: 4   DAMVEILSSLSVKNLLRFKCVCKSWYSLIENPSFISKHLKNVSTRLIVVY 53


>ref|XP_004305871.1| PREDICTED: putative F-box protein At3g16210-like [Fragaria vesca
           subsp. vesca]
          Length = 398

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/68 (39%), Positives = 38/68 (55%)
 Frame = +3

Query: 87  GNCHWKFNHTMSDYISVDNLVLILKYLPVKTLLKFRCVCKEWKQLIDSPSFAQKHISVQN 266
           G+   K  HT       D +  IL  LPVK+L++FRCVCK W+ LI  P F +KH S + 
Sbjct: 4   GDVVLKRAHTNHGEYEEDVIAEILAKLPVKSLIRFRCVCKSWRALISDPYFVKKHFSWRA 63

Query: 267 PRFLVEYE 290
             + V ++
Sbjct: 64  ETYKVNFD 71


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