BLASTX nr result
ID: Rheum21_contig00005063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00005063
(910 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006420120.1| hypothetical protein CICLE_v10005932mg [Citr... 110 6e-22
ref|XP_006653225.1| PREDICTED: histone H1-like [Oryza brachyantha] 105 2e-20
gb|ABB59463.1| histone H1F [Nicotiana tabacum] gi|86991342|gb|AB... 105 2e-20
gb|ABK93006.1| unknown [Populus trichocarpa] 105 3e-20
ref|XP_002315727.1| hypothetical protein POPTR_0010s08740g [Popu... 105 3e-20
gb|ABP87679.1| histone H1E [Nicotiana tabacum] 104 4e-20
emb|CBI26367.3| unnamed protein product [Vitis vinifera] 104 5e-20
ref|XP_002284259.1| PREDICTED: uncharacterized protein LOC100251... 104 5e-20
ref|XP_006352120.1| PREDICTED: histone H1-like [Solanum tuberosum] 103 7e-20
ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum] 103 9e-20
ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopers... 102 2e-19
ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833... 102 2e-19
ref|XP_004247649.1| PREDICTED: uncharacterized protein LOC101245... 102 3e-19
gb|AFW67339.1| putative histone H1/H5 domain family protein [Zea... 101 3e-19
gb|ACG48749.1| histone H1 [Zea mays] 101 3e-19
gb|ACF80086.1| unknown [Zea mays] gi|413932787|gb|AFW67338.1| pu... 101 3e-19
gb|EXB95714.1| Histone H1 [Morus notabilis] 100 6e-19
ref|XP_006379869.1| hypothetical protein POPTR_0008s16220g [Popu... 100 6e-19
emb|CBI17953.3| unnamed protein product [Vitis vinifera] 100 6e-19
ref|XP_002282346.1| PREDICTED: uncharacterized protein LOC100247... 100 6e-19
>ref|XP_006420120.1| hypothetical protein CICLE_v10005932mg [Citrus clementina]
gi|557521993|gb|ESR33360.1| hypothetical protein
CICLE_v10005932mg [Citrus clementina]
Length = 199
Score = 110 bits (276), Expect = 6e-22
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
+HPPY EM+ EA+ ALKERTGSS +AIAK IEE+QK +P+NFKKLL VQLKK VA+GKL
Sbjct: 27 AHPPYSEMINEAITALKERTGSSQFAIAKFIEEKQKANLPNNFKKLLLVQLKKLVANGKL 86
Query: 325 VKVKNSFKIAPVEKKST 375
VKVKNSFK+ P ST
Sbjct: 87 VKVKNSFKLPPKSSSST 103
>ref|XP_006653225.1| PREDICTED: histone H1-like [Oryza brachyantha]
Length = 187
Score = 105 bits (263), Expect = 2e-20
Identities = 48/78 (61%), Positives = 65/78 (83%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
PSHPPY EM+KEA+ ALKERTGSS +AIAKH+E++ V++P+N+KK+LS+QL+ F A GK
Sbjct: 32 PSHPPYFEMIKEAIAALKERTGSSAHAIAKHMEDKHGVSLPANYKKMLSIQLRGFAAKGK 91
Query: 322 LVKVKNSFKIAPVEKKST 375
LVKVK S+K++ KK +
Sbjct: 92 LVKVKASYKLSDAAKKDS 109
>gb|ABB59463.1| histone H1F [Nicotiana tabacum] gi|86991342|gb|ABD16132.1| histone
H1f [Nicotiana tabacum]
Length = 184
Score = 105 bits (262), Expect = 2e-20
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
SHPPY EM+ EA+VALKERTGSS +AIAK IEE+QK +PSNF+KLL VQLKK VASGKL
Sbjct: 17 SHPPYAEMISEAIVALKERTGSSQFAIAKFIEEKQK-DLPSNFRKLLLVQLKKLVASGKL 75
Query: 325 VKVKNSFKIAPVEKK 369
K+K SFK+AP K
Sbjct: 76 SKIKGSFKLAPAAAK 90
>gb|ABK93006.1| unknown [Populus trichocarpa]
Length = 197
Score = 105 bits (261), Expect = 3e-20
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
++P Y EMVKEALVALKERTGSS AIAK IEE+QK ++P+NFKKLL VQLKK VA+GKL
Sbjct: 37 AYPTYHEMVKEALVALKERTGSSQIAIAKFIEEKQKSSLPANFKKLLLVQLKKLVANGKL 96
Query: 325 VKVKNSFKIAP 357
VKVKNSFK+ P
Sbjct: 97 VKVKNSFKLPP 107
>ref|XP_002315727.1| hypothetical protein POPTR_0010s08740g [Populus trichocarpa]
gi|118483263|gb|ABK93534.1| unknown [Populus
trichocarpa] gi|222864767|gb|EEF01898.1| hypothetical
protein POPTR_0010s08740g [Populus trichocarpa]
Length = 197
Score = 105 bits (261), Expect = 3e-20
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
++P Y EMVKEALVALKERTGSS AIAK IEE+QK ++P+NFKKLL VQLKK VA+GKL
Sbjct: 37 AYPTYHEMVKEALVALKERTGSSQIAIAKFIEEKQKSSLPANFKKLLLVQLKKLVANGKL 96
Query: 325 VKVKNSFKIAP 357
VKVKNSFK+ P
Sbjct: 97 VKVKNSFKLPP 107
>gb|ABP87679.1| histone H1E [Nicotiana tabacum]
Length = 192
Score = 104 bits (260), Expect = 4e-20
Identities = 54/75 (72%), Positives = 61/75 (81%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
SHPPY EM+ EA+VALKERTGSS AIAK IEE+QK +PSNF+KLL VQLKK VASGKL
Sbjct: 17 SHPPYAEMISEAIVALKERTGSSQVAIAKFIEEKQK-DLPSNFRKLLLVQLKKLVASGKL 75
Query: 325 VKVKNSFKIAPVEKK 369
K+K SFK+AP K
Sbjct: 76 TKIKGSFKLAPAAAK 90
>emb|CBI26367.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 104 bits (259), Expect = 5e-20
Identities = 52/78 (66%), Positives = 62/78 (79%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPY EM+ EA++ALKERTGSS AIAK IEE+QK +P+NFKKLL VQLKK VAS K
Sbjct: 32 PAHPPYSEMINEAIIALKERTGSSQIAIAKFIEEKQKSGLPANFKKLLLVQLKKLVASEK 91
Query: 322 LVKVKNSFKIAPVEKKST 375
LVKVKNS+K+ K +
Sbjct: 92 LVKVKNSYKLPSAAAKKS 109
>ref|XP_002284259.1| PREDICTED: uncharacterized protein LOC100251147 [Vitis vinifera]
Length = 216
Score = 104 bits (259), Expect = 5e-20
Identities = 52/78 (66%), Positives = 62/78 (79%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPY EM+ EA++ALKERTGSS AIAK IEE+QK +P+NFKKLL VQLKK VAS K
Sbjct: 32 PAHPPYSEMINEAIIALKERTGSSQIAIAKFIEEKQKSGLPANFKKLLLVQLKKLVASEK 91
Query: 322 LVKVKNSFKIAPVEKKST 375
LVKVKNS+K+ K +
Sbjct: 92 LVKVKNSYKLPSAAAKKS 109
>ref|XP_006352120.1| PREDICTED: histone H1-like [Solanum tuberosum]
Length = 193
Score = 103 bits (258), Expect = 7e-20
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
SHPPY+EM+ EA+ LKERTGSS AIAK IEE+QK +PSNF+KLL VQLKK VASGKL
Sbjct: 19 SHPPYVEMISEAITTLKERTGSSQVAIAKFIEEKQK-GLPSNFRKLLLVQLKKLVASGKL 77
Query: 325 VKVKNSFKIAPVEK 366
K+K+SFK++PV K
Sbjct: 78 TKIKSSFKVSPVVK 91
>ref|XP_006351636.1| PREDICTED: histone H1-like [Solanum tuberosum]
Length = 283
Score = 103 bits (257), Expect = 9e-20
Identities = 55/86 (63%), Positives = 65/86 (75%), Gaps = 10/86 (11%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPY EM+K+A+V LKERTGSS YAI K IEE+QK +PSNFKK L +QLKKFVAS K
Sbjct: 54 PAHPPYFEMIKDAIVTLKERTGSSQYAITKFIEEKQK-NLPSNFKKSLLIQLKKFVASEK 112
Query: 322 LVKVKNSFKI----------APVEKK 369
LVKVKNS+K+ AP +KK
Sbjct: 113 LVKVKNSYKLPSGSKPAAAAAPAKKK 138
>ref|XP_004247225.1| PREDICTED: histone H1-like [Solanum lycopersicum]
gi|585241|sp|P37218.1|H1_SOLLC RecName: Full=Histone H1
gi|424100|gb|AAA50578.1| histone H1 [Solanum
lycopersicum]
Length = 287
Score = 102 bits (255), Expect = 2e-19
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPY EM+K+A+V LKERTGSS +AI K IEE+QK ++PSNFKKLL QLKKFVAS K
Sbjct: 54 PTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEK 112
Query: 322 LVKVKNSFKI 351
LVKVKNS+K+
Sbjct: 113 LVKVKNSYKL 122
>ref|XP_003557313.1| PREDICTED: uncharacterized protein LOC100833820 [Brachypodium
distachyon]
Length = 297
Score = 102 bits (254), Expect = 2e-19
Identities = 49/72 (68%), Positives = 58/72 (80%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
PSHPPY EMV EA+ LKERTGSS YAIAK +EE+ K +P NF+KLL VQLKK VA+GK
Sbjct: 57 PSHPPYAEMVSEAISTLKERTGSSQYAIAKFVEEKHKAHLPPNFRKLLLVQLKKLVAAGK 116
Query: 322 LVKVKNSFKIAP 357
L KVK+S+K+ P
Sbjct: 117 LTKVKSSYKLPP 128
>ref|XP_004247649.1| PREDICTED: uncharacterized protein LOC101245495 [Solanum
lycopersicum]
Length = 192
Score = 102 bits (253), Expect = 3e-19
Identities = 51/74 (68%), Positives = 61/74 (82%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
SHPPY+EM+ EA+ LKERTGSS AIAK IEE+QK +P NF+KLL VQLKK VASGKL
Sbjct: 19 SHPPYVEMISEAITTLKERTGSSQVAIAKFIEEKQK-GLPPNFRKLLLVQLKKLVASGKL 77
Query: 325 VKVKNSFKIAPVEK 366
K+K+SFK++PV K
Sbjct: 78 TKIKSSFKVSPVVK 91
>gb|AFW67339.1| putative histone H1/H5 domain family protein [Zea mays]
Length = 248
Score = 101 bits (252), Expect = 3e-19
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPY EMV EA+ +LKERTGSS YAIAK +E++ K +P NF+KLL+VQLKK VA GK
Sbjct: 48 PTHPPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKDKLPPNFRKLLNVQLKKLVAGGK 107
Query: 322 LVKVKNSFKIAPVEKK 369
L KVKNS+K++ K
Sbjct: 108 LTKVKNSYKLSSAATK 123
>gb|ACG48749.1| histone H1 [Zea mays]
Length = 260
Score = 101 bits (252), Expect = 3e-19
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPY EMV EA+ +LKERTGSS YAIAK +E++ K +P NF+KLL+VQLKK VA GK
Sbjct: 48 PTHPPYAEMVSEAVTSLKERTGSSSYAIAKFVEDKHKDKLPPNFRKLLNVQLKKLVAGGK 107
Query: 322 LVKVKNSFKIAPVEK 366
L KVKNS+K++ K
Sbjct: 108 LTKVKNSYKLSSATK 122
>gb|ACF80086.1| unknown [Zea mays] gi|413932787|gb|AFW67338.1| putative histone
H1/H5 domain family protein [Zea mays]
Length = 261
Score = 101 bits (252), Expect = 3e-19
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPY EMV EA+ +LKERTGSS YAIAK +E++ K +P NF+KLL+VQLKK VA GK
Sbjct: 48 PTHPPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKDKLPPNFRKLLNVQLKKLVAGGK 107
Query: 322 LVKVKNSFKIAPVEKK 369
L KVKNS+K++ K
Sbjct: 108 LTKVKNSYKLSSAATK 123
>gb|EXB95714.1| Histone H1 [Morus notabilis]
Length = 163
Score = 100 bits (250), Expect = 6e-19
Identities = 50/78 (64%), Positives = 59/78 (75%)
Frame = +1
Query: 148 HPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKLV 327
HPPY EM+ EA+ ALKER GSS AIAK I+E+ +P NFKKLLSVQLKKFV S +L
Sbjct: 24 HPPYFEMITEAISALKERNGSSQQAIAKFIDEKHGEVLPPNFKKLLSVQLKKFVKSERLF 83
Query: 328 KVKNSFKIAPVEKKSTED 381
K KNSFKI+P E+K +D
Sbjct: 84 KAKNSFKISPAEQKKKKD 101
>ref|XP_006379869.1| hypothetical protein POPTR_0008s16220g [Populus trichocarpa]
gi|550333196|gb|ERP57666.1| hypothetical protein
POPTR_0008s16220g [Populus trichocarpa]
Length = 181
Score = 100 bits (250), Expect = 6e-19
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = +1
Query: 145 SHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGKL 324
++P Y EMVKEA+VALKER+GSS AIAK IEE+ K +P NFKKLL VQLKK VA+GKL
Sbjct: 36 AYPTYHEMVKEAIVALKERSGSSQIAIAKFIEEKHKSNLPVNFKKLLLVQLKKLVANGKL 95
Query: 325 VKVKNSFKIAPVEKKSTEDS 384
VKVKNSFK+ P K S +D+
Sbjct: 96 VKVKNSFKLPP--KSSAKDA 113
>emb|CBI17953.3| unnamed protein product [Vitis vinifera]
Length = 225
Score = 100 bits (250), Expect = 6e-19
Identities = 49/72 (68%), Positives = 61/72 (84%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPYIEM+ EA+VALKE++GSS YAIAK IEE+ K +P NFKKLL + LKKFVA+GK
Sbjct: 54 PTHPPYIEMITEAIVALKEKSGSSQYAIAKFIEEKHK-QLPPNFKKLLLIHLKKFVAAGK 112
Query: 322 LVKVKNSFKIAP 357
LVKV+ S+K+ P
Sbjct: 113 LVKVRGSYKLPP 124
>ref|XP_002282346.1| PREDICTED: uncharacterized protein LOC100247613 [Vitis vinifera]
Length = 275
Score = 100 bits (250), Expect = 6e-19
Identities = 49/72 (68%), Positives = 61/72 (84%)
Frame = +1
Query: 142 PSHPPYIEMVKEALVALKERTGSSHYAIAKHIEEQQKVTVPSNFKKLLSVQLKKFVASGK 321
P+HPPYIEM+ EA+VALKE++GSS YAIAK IEE+ K +P NFKKLL + LKKFVA+GK
Sbjct: 54 PTHPPYIEMITEAIVALKEKSGSSQYAIAKFIEEKHK-QLPPNFKKLLLIHLKKFVAAGK 112
Query: 322 LVKVKNSFKIAP 357
LVKV+ S+K+ P
Sbjct: 113 LVKVRGSYKLPP 124