BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005058
         (667 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     192   1e-46
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   192   1e-46
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624...   191   2e-46
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   188   1e-45
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   186   7e-45
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   184   2e-44
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni...   184   2e-44
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni...   183   4e-44
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              183   5e-44
gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]       183   5e-44
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...   183   5e-44
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...   183   5e-44
gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]     182   8e-44
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         181   2e-43
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]       181   2e-43
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662...   181   2e-43
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   181   2e-43
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   180   4e-43
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  180   4e-43
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  179   9e-43

>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  192 bits (487), Expect = 1e-46
 Identities = 97/204 (47%), Positives = 126/204 (61%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  LLRA++K N K WE+ L  VEF+YNR+ HS T + PFEVVYG    
Sbjct: 1365 TDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPL 1424

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                     L++      + R   ++++H++T+E +E+R+   A    K RK++ F PGD
Sbjct: 1425 SPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGD 1484

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVWVHL K RFP KRKSKL  RGDGPF VL  I DNAY+I LP +YG+ +TFNVADL  +
Sbjct: 1485 LVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNVADLTPF 1544

Query: 127  VEPESDDGEAGTLHNQVGKGDAIP 56
               E  +    T   +    + IP
Sbjct: 1545 FGLEDSESSRSTPFQEGEDDEDIP 1568


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  192 bits (487), Expect = 1e-46
 Identities = 97/204 (47%), Positives = 126/204 (61%)
 Frame = -1

Query: 667 TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
           TDGQTEV NRTL  LLRA++K N K WE+ L  VEF+YNR+ HS T + PFEVVYG    
Sbjct: 333 TDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPL 392

Query: 487 XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                    L++      + R   ++++H++T+E +E+R+   A    K RK++ F PGD
Sbjct: 393 SPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGD 452

Query: 307 LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
           LVWVHL K RFP KRKSKL  RGDGPF VL  I DNAY+I LP +YG+ +TFNVADL  +
Sbjct: 453 LVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSSTFNVADLTPF 512

Query: 127 VEPESDDGEAGTLHNQVGKGDAIP 56
              E  +    T   +    + IP
Sbjct: 513 FGLEDSESSRSTPFQEGEDDEDIP 536


>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
          Length = 821

 Score =  191 bits (485), Expect = 2e-46
 Identities = 91/180 (50%), Positives = 123/180 (68%)
 Frame = -1

Query: 667 TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
           TDGQTEV NRTL  LLRA+++ N K WE+ L  VEF+YNR+ HSATK +PFE+VYG N  
Sbjct: 288 TDGQTEVVNRTLSTLLRAIIQKNLKTWEECLPHVEFAYNRTVHSATKFSPFEIVYGFNPL 347

Query: 487 XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                    + +        +   +++LH+RTR+ +E+R +Q A Q  KGRK+++F PGD
Sbjct: 348 TPLDLLPLPIDERASMDGKKKAEFVKQLHERTRQHIEKRTEQYATQANKGRKQVVFQPGD 407

Query: 307 LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            VWVH+ K RFPA+R+SKL  RGDGPF+V+  I DNAY++ LP EY +  TFNV+DL  +
Sbjct: 408 WVWVHMRKERFPAQRRSKLLPRGDGPFQVVARINDNAYKLDLPGEYNVIATFNVSDLSPF 467


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score =  188 bits (478), Expect = 1e-45
 Identities = 96/204 (47%), Positives = 124/204 (60%)
 Frame = -1

Query: 667 TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
           TDGQTEV NRTL  LLRA++K N K WE+ L  VEF+YNR+ HS T + PFEVVYG    
Sbjct: 333 TDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPL 392

Query: 487 XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                    L++      +     ++++H++T+E +E+R+   A    K RK++ F PGD
Sbjct: 393 APIDLLPLPLQERSDMEASKHATYVKKIHEKTKEAIEKRSKYYAAWANKDRKKVTFEPGD 452

Query: 307 LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
           LVWVHL K RFP KRKSKL  RGDGPF VL  I DNAY+I LP +YG+  TFNVADL  +
Sbjct: 453 LVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSPTFNVADLTPF 512

Query: 127 VEPESDDGEAGTLHNQVGKGDAIP 56
              E  +    T   +    + IP
Sbjct: 513 FGLEDSESSRSTPFQEGEDDEDIP 536


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  186 bits (471), Expect = 7e-45
 Identities = 96/201 (47%), Positives = 128/201 (63%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  LLR +++ N K WE+ L  VEF+YNR+ HS T ++PFEV YG N  
Sbjct: 1085 TDGQTEVVNRTLTQLLRVVIRKNLKSWEESLPYVEFAYNRAIHSTTNMSPFEVAYGFNPL 1144

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                     + D E    A + + I+E H + R Q+E++ +Q A++  KGRK IIF PGD
Sbjct: 1145 TPLDLIPLHVNDKECVDAAKKAQGIREFHSKVRAQIEKKNEQYAQKANKGRKAIIFKPGD 1204

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
             VW+H  K RFP +RKSKL  RGDGPF+VL+ I DNAY++ L  E+ + +TFNVADL  +
Sbjct: 1205 WVWIHYSKNRFPNQRKSKLMPRGDGPFQVLERINDNAYKLDLRGEHSVSSTFNVADLAPF 1264

Query: 127  VEPESDDGEAGTLHNQVGKGD 65
                 D  ++GT   Q G+ D
Sbjct: 1265 -----DFSDSGTNLFQEGEDD 1280


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  184 bits (468), Expect = 2e-44
 Identities = 94/201 (46%), Positives = 127/201 (63%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  +LRA+LK N K WE+ L  +EF+YNRS HS TK+ PFE+VYG    
Sbjct: 1406 TDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPR 1465

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  LI ++H+ T+E +E+   +      KGRK ++F PGD
Sbjct: 1466 APIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGD 1525

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R DGPF+VL+ I DNAY++ LP+++G+  TFN+ADL+ Y
Sbjct: 1526 LVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFGVSPTFNIADLKPY 1585

Query: 127  VEPESDDGEAGTLHNQVGKGD 65
            +  E D+  + T   Q G+ D
Sbjct: 1586 L-GEEDELPSRTTSFQEGEDD 1605


>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1616

 Score =  184 bits (467), Expect = 2e-44
 Identities = 97/206 (47%), Positives = 129/206 (62%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  +LRA+LK N K WE+ L  VEF+YNRS+HS TK  PFE+VYG    
Sbjct: 1390 TDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPR 1449

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  L+ +LH+ T+E +E+   +      KG+K + F PGD
Sbjct: 1450 APIDLLPHPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGD 1509

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R DGPF+VL+ I DNAY++ LP+++G+  TFN+ADL+ Y
Sbjct: 1510 LVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPY 1569

Query: 127  VEPESDDGEAGTLHNQVGKGDAIPPS 50
            +  E D+ E+ T   Q G+ D   PS
Sbjct: 1570 L-GEEDELESRTTQMQEGEDDEDIPS 1594


>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1619

 Score =  183 bits (465), Expect = 4e-44
 Identities = 96/206 (46%), Positives = 129/206 (62%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRT+  +LRA+LK N K WE+ L  VEF+YNRS+HS TK  PFE+VYG    
Sbjct: 1286 TDGQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPR 1345

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  L+ +LH+ T+E +E+   +      KG+K + F PGD
Sbjct: 1346 APIDLLPLPTLERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGD 1405

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R DGPF+VL+ I DNAY++ LP+++G+  TFN+ADL+ Y
Sbjct: 1406 LVWLHLRKDRFPNLRKSKLPPRADGPFQVLQKINDNAYKLELPADFGVSPTFNIADLKPY 1465

Query: 127  VEPESDDGEAGTLHNQVGKGDAIPPS 50
            +  E D+ E+ T   Q G+ D   PS
Sbjct: 1466 L-GEEDELESRTTQMQEGEDDEDIPS 1490


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  183 bits (464), Expect = 5e-44
 Identities = 94/207 (45%), Positives = 131/207 (63%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  LLRA++K N K WED L  VEF+YN S HSA+K +PF++VYG N  
Sbjct: 1553 TDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSMHSASKFSPFQIVYGFNPT 1612

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                     L +        +  L+Q++H++ ++ +E++  Q A+   K RK +IF  GD
Sbjct: 1613 TPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEEKTKQYAKHANKSRKEVIFNEGD 1672

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP +RKSKL  R DGPF+VLK I +NAY + L  +Y + N+FNVADL  +
Sbjct: 1673 LVWIHLRKERFPKERKSKLMSRIDGPFKVLKRINNNAYSLDLQGKYNVSNSFNVADLFPF 1732

Query: 127  VEPESDDGEAGTLHNQVGKGDAIPPSL 47
            +   +D+ +  +   Q+G+ D I  SL
Sbjct: 1733 I---ADNTDLRSNPFQLGEDDVIMTSL 1756


>gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1096

 Score =  183 bits (464), Expect = 5e-44
 Identities = 97/220 (44%), Positives = 137/220 (62%), Gaps = 1/220 (0%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTLG +LRA+LK     WED L  VEF+YNR+ HS+T   PFEVVYG N  
Sbjct: 823  TDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPL 882

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       D  +     +  +++++H++TR  +E++  + A +  KGRK +IF PGD
Sbjct: 883  TPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGD 942

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVWVH+ K RFP+KRK+KL+ RG GP++VL+ IGDNAY++ LP E+ +  TFNV+DL  Y
Sbjct: 943  LVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHY 1002

Query: 127  VEPESD-DGEAGTLHNQVGKGDAIPPSLSVNEEDEAFRVP 11
               ++D D    +L  + G       S  + ++D+A   P
Sbjct: 1003 ---DADLDSRTNSLQEE-GNDSIQGSSTPLKDKDDALETP 1038


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  183 bits (464), Expect = 5e-44
 Identities = 97/220 (44%), Positives = 137/220 (62%), Gaps = 1/220 (0%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTLG +LRA+LK     WED L  VEF+YNR+ HS+T   PFEVVYG N  
Sbjct: 1315 TDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPL 1374

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       D  +     +  +++++H++TR  +E++  + A +  KGRK +IF PGD
Sbjct: 1375 TPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGD 1434

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVWVH+ K RFP+KRK+KL+ RG GP++VL+ IGDNAY++ LP E+ +  TFNV+DL  Y
Sbjct: 1435 LVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHY 1494

Query: 127  VEPESD-DGEAGTLHNQVGKGDAIPPSLSVNEEDEAFRVP 11
               ++D D    +L  + G       S  + ++D+A   P
Sbjct: 1495 ---DADLDSRTNSLQEE-GNDSIQGSSTPLKDKDDALETP 1530


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score =  183 bits (464), Expect = 5e-44
 Identities = 97/220 (44%), Positives = 137/220 (62%), Gaps = 1/220 (0%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTLG +LRA+LK     WED L  VEF+YNR+ HS+T   PFEVVYG N  
Sbjct: 1315 TDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPL 1374

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       D  +     +  +++++H++TR  +E++  + A +  KGRK +IF PGD
Sbjct: 1375 TPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGD 1434

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVWVH+ K RFP+KRK+KL+ RG GP++VL+ IGDNAY++ LP E+ +  TFNV+DL  Y
Sbjct: 1435 LVWVHMRKERFPSKRKTKLDPRGSGPYKVLERIGDNAYKLDLPGEFQVSATFNVSDLSHY 1494

Query: 127  VEPESD-DGEAGTLHNQVGKGDAIPPSLSVNEEDEAFRVP 11
               ++D D    +L  + G       S  + ++D+A   P
Sbjct: 1495 ---DADLDSRTNSLQEE-GNDSIQGSSTPLKDKDDALETP 1530


>gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1154

 Score =  182 bits (462), Expect = 8e-44
 Identities = 92/186 (49%), Positives = 118/186 (63%)
 Frame = -1

Query: 664  DGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXXX 485
            DGQ EV NRTL  LLR M+K N K WED L  VEF+YNR  HS T+L+PFEVVYG N   
Sbjct: 965  DGQMEVVNRTLSMLLRMMIKKNLKEWEDCLPHVEFAYNRVVHSTTQLSPFEVVYGFNPIT 1024

Query: 484  XXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGDL 305
                    L++  +     R   ++++H++T+E +E+     A +  K RK+++F PG+L
Sbjct: 1025 PLDLLPLPLQERANMEATKRADYVKKMHEKTKETIERIIQSYAAKANKDRKKMLFQPGEL 1084

Query: 304  VWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAYV 125
            VWVHL K RFP KRKSKL   GDGPF VL+ I DNAY+I LP +Y + NTFNV DL  + 
Sbjct: 1085 VWVHLRKDRFPEKRKSKLMPHGDGPFRVLEKITDNAYKIDLPGDYTVSNTFNVVDLSPFF 1144

Query: 124  EPESDD 107
              E  D
Sbjct: 1145 GTEETD 1150


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  181 bits (459), Expect = 2e-43
 Identities = 95/201 (47%), Positives = 125/201 (62%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  +LRA+LK N K WED L  +EF+YNRS HS TK+ PF++VYG    
Sbjct: 1365 TDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPR 1424

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  L+ +LH+ T+E +E+   +      KGRK I F PGD
Sbjct: 1425 APIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASDKGRKEINFEPGD 1484

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R DGPF+VL+ I DNAY + LP+++G+  TFN+ADL+ Y
Sbjct: 1485 LVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLDLPADFGVSPTFNIADLKPY 1544

Query: 127  VEPESDDGEAGTLHNQVGKGD 65
            +  E  + E+ T   Q G+ D
Sbjct: 1545 L-GEEVELESRTTQMQEGEND 1564


>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
          Length = 1587

 Score =  181 bits (458), Expect = 2e-43
 Identities = 94/199 (47%), Positives = 126/199 (63%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  +LRA+LK N K WE+ L  VEF+YNRS+HS TK  PFE+VYG    
Sbjct: 1390 TDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPR 1449

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  L+ +LH+ T+E +E+   +      KG+K + F PGD
Sbjct: 1450 APIDLLPLPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGD 1509

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R DGPF+VL+ I DNAY++ LP+++G+  TFN+ADL+ Y
Sbjct: 1510 LVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNAYKLELPADFGVSPTFNIADLKPY 1569

Query: 127  VEPESDDGEAGTLHNQVGK 71
            +  E D+ E+ T   Q G+
Sbjct: 1570 L-GEEDELESRTTQMQEGE 1587


>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
          Length = 612

 Score =  181 bits (458), Expect = 2e-43
 Identities = 92/192 (47%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
 Frame = -1

Query: 667 TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
           TDGQTEV N+TLG LLR +LK N K WE  L  VEF+YNR+ HS T  +PFE+VYG N  
Sbjct: 418 TDGQTEVVNKTLGTLLRTVLKKNLKSWEACLPHVEFAYNRTVHSTTNCSPFEIVYGFNPL 477

Query: 487 XXXXXXXXXLKDN-EHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPG 311
                         +H     +   +++LH++ + Q+E++    ARQ  K RK+++  PG
Sbjct: 478 TPLDLLPMPNITMFKHKDAQAKAEYVKKLHEQVKAQIEKKNASYARQANKSRKKVVLEPG 537

Query: 310 DLVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEA 131
           D VWVHL K RFP  RKSKL+ RGDGPF+VL+ I DNAY+I LP+EY +  TFNV+DL  
Sbjct: 538 DWVWVHLKKERFPEHRKSKLQPRGDGPFQVLEKINDNAYKIDLPNEYNVSATFNVSDLSL 597

Query: 130 YVEPESDDGEAG 95
           +   ++D G  G
Sbjct: 598 F---DADGGSLG 606


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  181 bits (458), Expect = 2e-43
 Identities = 95/206 (46%), Positives = 127/206 (61%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  +LRA+LK N K WE+ L  VEF+YNRS+HS TK  PFE+VYG    
Sbjct: 1390 TDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPR 1449

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +        L+ +LH+ T+E +E+   +      KG+K + F PGD
Sbjct: 1450 APIDLLPLPTSERVNFDAKYHAELMLKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGD 1509

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R DGPF+VL+ I DN Y++ LP+++G+  TFN+ADL+ Y
Sbjct: 1510 LVWLHLRKDRFPNLRKSKLLPRADGPFKVLQKINDNTYKLELPADFGVSPTFNIADLKPY 1569

Query: 127  VEPESDDGEAGTLHNQVGKGDAIPPS 50
            +  E D+ E+ T   Q G+ D   PS
Sbjct: 1570 L-GEEDELESRTTQMQEGEDDEDIPS 1594


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  180 bits (456), Expect = 4e-43
 Identities = 94/201 (46%), Positives = 126/201 (62%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NRTL  +LRA+LK N K WE+ L  +EF+YNRS HS TK+ PF++VYG    
Sbjct: 1362 TDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPR 1421

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  L+ +LH+ T+E +E+   +      KGR+ + F PGD
Sbjct: 1422 APIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKGRRELTFEPGD 1481

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R DGPF+VL  I +NAY+I LP+++G+  TFNVADL+ Y
Sbjct: 1482 LVWLHLRKERFPDLRKSKLMPRADGPFKVLAKINENAYKIDLPADFGVSPTFNVADLKPY 1541

Query: 127  VEPESDDGEAGTLHNQVGKGD 65
            +  E D+ E+ T   Q G+ D
Sbjct: 1542 L-GEEDELESRTTQMQEGEDD 1561



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 52/196 (26%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTE  N+ L  +L A +    K W+  L   EFSYN S  ++ ++AP+E +YGR   
Sbjct: 2184 TDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCR 2243

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTR---EQLEQRADQNARQHQKGRKRIIFY 317
                       D    +      +++E   + R   + L+    +        R+ + F 
Sbjct: 2244 TPLLW------DQVGESQVFGTDILREAEAKVRTIWDNLKVAQSRQKSYADNRRRNLEFA 2297

Query: 316  PGDLVWVHL--CKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYG-IHNTFNV 146
              D V++ +   +G    + K KL  R  GPF ++   G+ AY++ LP+  G +H+ F+V
Sbjct: 2298 VDDFVYLRVTPLRGVHRFQTKGKLAPRFVGPFRIIARRGEVAYQLELPASLGNVHDVFHV 2357

Query: 145  ADLEAYVEPESDDGEA 98
            + L+  +   S+  ++
Sbjct: 2358 SQLKKCLRVPSEQADS 2373


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  180 bits (456), Expect = 4e-43
 Identities = 93/201 (46%), Positives = 125/201 (62%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NR+L  +LRA+LKTN K WE+ L  +EF+YNRS HS TK+ PFE+VYG    
Sbjct: 1418 TDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPR 1477

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  LI ++H+ T+E +E+   +      KGRK ++F PGD
Sbjct: 1478 APIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGD 1537

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R  GPF+VL+ I DNAY + LP ++G+  TFN+ADL+ Y
Sbjct: 1538 LVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPXDFGVSPTFNIADLKPY 1597

Query: 127  VEPESDDGEAGTLHNQVGKGD 65
            +  E D+  + T   Q G+ D
Sbjct: 1598 L-GEEDELPSRTTSVQEGEDD 1617


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  179 bits (453), Expect = 9e-43
 Identities = 92/201 (45%), Positives = 125/201 (62%)
 Frame = -1

Query: 667  TDGQTEVTNRTLGALLRAMLKTNPKGWEDLLSTVEFSYNRSRHSATKLAPFEVVYGRNXX 488
            TDGQTEV NR+L  +LRA+LK N K WE+ L  +EF+YNRS HS TK+ PFE+VYG    
Sbjct: 1421 TDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPR 1480

Query: 487  XXXXXXXXXLKDNEHPTVANRVRLIQELHQRTREQLEQRADQNARQHQKGRKRIIFYPGD 308
                       +  +     R  LI ++H+ T+E +E+   +      KGRK ++F PGD
Sbjct: 1481 APIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGD 1540

Query: 307  LVWVHLCKGRFPAKRKSKLEQRGDGPFEVLKAIGDNAYEIALPSEYGIHNTFNVADLEAY 128
            LVW+HL K RFP  RKSKL  R  GPF+VL+ I DNAY + LP+++G+  TFN+ADL+ Y
Sbjct: 1541 LVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFGVSPTFNIADLKPY 1600

Query: 127  VEPESDDGEAGTLHNQVGKGD 65
            +  E D+  + T   Q G+ D
Sbjct: 1601 L-GEEDELPSRTTSVQEGEDD 1620