BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005016
         (807 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   188   2e-75
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]              187   7e-74
gb|ABA99152.1| retrotransposon protein, putative, unclassified [...   186   2e-72
ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [S...   180   6e-72
ref|XP_002455933.1| hypothetical protein SORBIDRAFT_03g027495 [S...   177   8e-72
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ...   181   2e-71
ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255 [S...   174   1e-70
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]     186   7e-70
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...   186   7e-70
ref|XP_002444548.1| hypothetical protein SORBIDRAFT_07g023610 [S...   178   1e-69
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   189   8e-68
gb|ACF87376.2| unknown [Zea mays]                                     179   8e-68
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S...   180   2e-67
ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [S...   175   8e-67
ref|XP_004986749.1| PREDICTED: uncharacterized mitochondrial pro...   172   2e-65
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc...   181   5e-65
ref|XP_002444394.1| hypothetical protein SORBIDRAFT_07g021220 [S...   182   1e-64
gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   164   2e-63
ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777...   183   3e-62
gb|AAX92854.1| retrotransposon protein, putative, unclassified [...   169   4e-62

>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  188 bits (477), Expect(3) = 2e-75
 Identities = 87/118 (73%), Positives = 104/118 (88%)
 Frame = +3

Query: 270  DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
            D+ AYSDA+W GC D+RK TSGY V+L DNL+SWSSKRQ+TVS SSA+A+YR +AN VAE
Sbjct: 946  DLVAYSDANWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYRAMANAVAE 1005

Query: 450  SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
            + WLRQLL EL TP + AT+VYCDNVSAVY+S+NP+QHQRTKHVEIDLHFVRD+VA+G
Sbjct: 1006 TCWLRQLLHELHTPPSKATLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVRDRVAVG 1063



 Score = 92.0 bits (227), Expect(3) = 2e-75
 Identities = 53/98 (54%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1    AIHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTAS 153
            A+ +EFSM DL  +H+FLG      S         Y+ EILE AGM++CKP +TPVDT +
Sbjct: 808  ALQAEFSMKDLGTLHHFLGITVTSDSSGLLLSQRQYSIEILERAGMSDCKPCSTPVDTNA 867

Query: 154  KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
            KLS      V + T YRSLA ALQYL FTRPDI YVVQ
Sbjct: 868  KLSSTDGSPVLDPTDYRSLASALQYLTFTRPDISYVVQ 905



 Score = 51.2 bits (121), Expect(3) = 2e-75
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +1

Query: 628  RVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
            RV HVPT SQYADIFTKGLP+SL+ +F +SL++
Sbjct: 1066 RVLHVPTTSQYADIFTKGLPSSLFVEFRSSLNV 1098


>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
          Length = 534

 Score =  187 bits (475), Expect(3) = 7e-74
 Identities = 88/120 (73%), Positives = 103/120 (85%)
 Frame = +3

Query: 264 PIDMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGV 443
           P ++  Y+DADW GC D+R+ TSGY V+L DNL+SWSSKRQ+TVS SSA+A+YR VANGV
Sbjct: 375 PTELVVYTDADWAGCPDTRRSTSGYAVFLGDNLVSWSSKRQHTVSRSSAEAEYRAVANGV 434

Query: 444 AESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
           AE+ WLRQLL EL+ P   AT+VYCDNVSAVY+SSNP+QHQRTKHVEIDLHFVR KVALG
Sbjct: 435 AEATWLRQLLLELQRPPRRATLVYCDNVSAVYLSSNPVQHQRTKHVEIDLHFVRVKVALG 494



 Score = 88.6 bits (218), Expect(3) = 7e-74
 Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTAS 153
           A+  EF+M+D+  +H+FLG      +         Y  +ILE AGM+ CKP +TPVD  S
Sbjct: 240 ALQREFAMTDMGQLHHFLGISVTRSAKGMFLSQRQYTLDILERAGMSACKPCSTPVDLHS 299

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           KLS +  P V + T YRSLAGALQYL FTRPDI Y VQ
Sbjct: 300 KLSEDGPP-VGDATQYRSLAGALQYLTFTRPDIAYAVQ 336



 Score = 50.4 bits (119), Expect(3) = 7e-74
 Identities = 22/33 (66%), Positives = 29/33 (87%)
 Frame = +1

Query: 628 RVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
           RV HVPT SQYAD+FTKGLPTS++++F +SL +
Sbjct: 497 RVTHVPTTSQYADVFTKGLPTSVFQEFRSSLTV 529


>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 989

 Score =  186 bits (473), Expect(3) = 2e-72
 Identities = 86/118 (72%), Positives = 102/118 (86%)
 Frame = +3

Query: 270  DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
            ++ AYSDADW GC D+RK TSGY V+L DNLISWSSKRQNTVS SSA+A+Y  VAN VAE
Sbjct: 821  ELIAYSDADWAGCPDTRKSTSGYAVFLGDNLISWSSKRQNTVSRSSAEAEYHAVANAVAE 880

Query: 450  SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
            + WL QLL EL++P+  AT+VYCDN+SAVYMS+NP+QHQRTKH+EIDLHFVR+ VALG
Sbjct: 881  ASWLHQLLSELQSPLQRATLVYCDNISAVYMSANPVQHQRTKHIEIDLHFVREHVALG 938



 Score = 85.1 bits (209), Expect(3) = 2e-72
 Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTAS 153
           A+  EF+M DL  +H+FLG   +H +         Y  EIL+ AGM  CKP +TPVDT  
Sbjct: 683 ALQHEFNMKDLGKLHHFLGMQVQHRNGCLFLSQQQYMMEILDRAGMAECKPCSTPVDTNP 742

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           KLS  T   V + + +RSLA ALQYL FTRPDI Y VQ
Sbjct: 743 KLSAVTGDPVQDPSDFRSLAIALQYLTFTRPDIAYAVQ 780



 Score = 49.7 bits (117), Expect(3) = 2e-72
 Identities = 24/40 (60%), Positives = 30/40 (75%)
 Frame = +1

Query: 628  RVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI*APPVQT 747
            RV HVPT SQ ADIFTKG+P+SL+ +F TSL++     QT
Sbjct: 941  RVLHVPTTSQDADIFTKGVPSSLFTEFKTSLNVRCTDAQT 980


>ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [Sorghum bicolor]
           gi|241933454|gb|EES06599.1| hypothetical protein
           SORBIDRAFT_04g009135 [Sorghum bicolor]
          Length = 801

 Score =  180 bits (456), Expect(3) = 6e-72
 Identities = 82/118 (69%), Positives = 102/118 (86%)
 Frame = +3

Query: 270 DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
           ++  Y+DADW GC D+R+ TSGY V+L  NL+SWSSKRQ  VS SSA+A+YR VANGVAE
Sbjct: 646 ELVVYTDADWAGCPDTRRSTSGYAVFLGGNLMSWSSKRQLVVSRSSAEAEYRAVANGVAE 705

Query: 450 SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
           + WLRQLL EL +P++ +T+VYCDNVSAVY+S+NP+QHQRTKHVEIDLHFVRD+VA+G
Sbjct: 706 ASWLRQLLAELHSPLSRSTLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVRDRVAVG 763



 Score = 89.4 bits (220), Expect(3) = 6e-72
 Identities = 52/98 (53%), Positives = 58/98 (59%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLGGGRE---------HISYASEILE*AGMTNCKPSATPVDTAS 153
           A+  EF + DL  +H+FLG   E            Y  +ILE AGMT CKP  TPVDT  
Sbjct: 508 ALQLEFPLKDLGVLHHFLGVTVEPRPTGLLLHQRQYTLDILERAGMTGCKPCPTPVDTQG 567

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           KLS      VA+ T YRSLAGALQYL FTRPDI Y VQ
Sbjct: 568 KLSEAEGSPVADPTAYRSLAGALQYLTFTRPDITYAVQ 605



 Score = 50.4 bits (119), Expect(3) = 6e-72
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 622 ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
           + RV HVPT SQ+ADIFTKGLP+S + +F TSL+I
Sbjct: 764 DVRVLHVPTTSQFADIFTKGLPSSTFAEFRTSLNI 798


>ref|XP_002455933.1| hypothetical protein SORBIDRAFT_03g027495 [Sorghum bicolor]
           gi|241927908|gb|EES01053.1| hypothetical protein
           SORBIDRAFT_03g027495 [Sorghum bicolor]
          Length = 682

 Score =  177 bits (450), Expect(3) = 8e-72
 Identities = 80/120 (66%), Positives = 101/120 (84%)
 Frame = +3

Query: 264 PIDMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGV 443
           P  +  Y+DADW GC D+R+ TSGY V+L  +L+SWSSKRQ TVS SSA+A+YR VANGV
Sbjct: 518 PTQLRVYTDADWAGCPDTRRSTSGYAVFLGGSLVSWSSKRQPTVSRSSAEAEYRAVANGV 577

Query: 444 AESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
           AE+ WLRQLL+EL  P+ +A ++YCDNVSA Y+S+NP+QHQRTKHVEIDLHFVR++VA+G
Sbjct: 578 AEATWLRQLLQELHHPLDSACLIYCDNVSACYLSTNPVQHQRTKHVEIDLHFVRERVAMG 637



 Score = 92.4 bits (228), Expect(3) = 8e-72
 Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLGGG----REHI-----SYASEILE*AGMTNCKPSATPVDTAS 153
           A+  EF+M DL P+H+FLG      R+ I      Y  +IL   GM+NCKP +TPVDT +
Sbjct: 382 ALKKEFAMKDLGPLHHFLGIAVQCHRDSILLSQRQYTLDILARHGMSNCKPCSTPVDTCA 441

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           K+  +  P VA+ T YRSL GALQYL FTRPDI Y VQ
Sbjct: 442 KVPADADPSVADPTAYRSLVGALQYLTFTRPDIAYSVQ 479



 Score = 49.3 bits (116), Expect(3) = 8e-72
 Identities = 22/42 (52%), Positives = 31/42 (73%)
 Frame = +1

Query: 628 RVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI*APPVQTEG 753
           RV H PT SQ+AD+FTKGLP+S++  F +SL++ +   QT G
Sbjct: 640 RVLHAPTTSQFADVFTKGLPSSIFMDFRSSLNVRSTDDQTAG 681


>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
           gi|241947225|gb|EES20370.1| hypothetical protein
           SORBIDRAFT_0019s003280 [Sorghum bicolor]
          Length = 761

 Score =  181 bits (458), Expect(3) = 2e-71
 Identities = 82/121 (67%), Positives = 104/121 (85%)
 Frame = +3

Query: 264 PIDMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGV 443
           P  +T Y+DADW GC D+R+ TSGY V+L  +L+SWSSKRQ TVS SSA+A+YR VANGV
Sbjct: 596 PSQLTVYTDADWAGCPDTRRSTSGYAVFLGSSLVSWSSKRQPTVSRSSAEAEYRAVANGV 655

Query: 444 AESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
           AE+ WL QLL+EL  P+++A +VYCDNVSAVY+S+NP+QHQRTKHVEIDLHFVR++VA+G
Sbjct: 656 AEASWLHQLLQELHHPMSSACLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVRERVAIG 715

Query: 624 M 626
           +
Sbjct: 716 V 716



 Score = 89.7 bits (221), Expect(3) = 2e-71
 Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLG------GGREHIS---YASEILE*AGMTNCKPSATPVDTAS 153
           A+   F+M DL P+H+FLG      G    +S   Y  +I+   GM++CKP +TPVDT +
Sbjct: 460 ALKKAFAMKDLGPLHHFLGMHVEQQGNSLFLSQRQYTLDIITRNGMSDCKPCSTPVDTCA 519

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           K+S +  P V + T YRSLAGALQYL FTRPDI Y VQ
Sbjct: 520 KVSASDGPSVTDPTAYRSLAGALQYLTFTRPDIAYAVQ 557



 Score = 47.8 bits (112), Expect(3) = 2e-71
 Identities = 20/33 (60%), Positives = 28/33 (84%)
 Frame = +1

Query: 628 RVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
           RV HVPT SQ+AD+FTKGLP+S++  F +SL++
Sbjct: 718 RVLHVPTTSQFADVFTKGLPSSVFTDFRSSLNV 750


>ref|XP_002444329.1| hypothetical protein SORBIDRAFT_07g020255 [Sorghum bicolor]
            gi|241940679|gb|EES13824.1| hypothetical protein
            SORBIDRAFT_07g020255 [Sorghum bicolor]
          Length = 987

 Score =  174 bits (440), Expect(3) = 1e-70
 Identities = 80/118 (67%), Positives = 99/118 (83%)
 Frame = +3

Query: 270  DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
            ++  Y DADW GC D+R+ TSGY V+L  NL+SWSSKRQ  VS SSA+A+YR VANGVAE
Sbjct: 832  ELVVYIDADWAGCPDTRRSTSGYAVFLGGNLVSWSSKRQLVVSRSSAEAEYRAVANGVAE 891

Query: 450  SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
            + WLRQLL EL +P++ +T+VY DNVS VY+S+NP+QHQRTKHVEIDLHFVRD+VA+G
Sbjct: 892  ASWLRQLLAELHSPLSRSTLVYYDNVSVVYLSTNPVQHQRTKHVEIDLHFVRDRVAVG 949



 Score = 90.9 bits (224), Expect(3) = 1e-70
 Identities = 52/98 (53%), Positives = 59/98 (60%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLGGGRE---------HISYASEILE*AGMTNCKPSATPVDTAS 153
           A+  EF + DL  +H+FLG   E            Y  +ILE AGMT CKP  TPVDT  
Sbjct: 694 ALQLEFPLKDLGVLHHFLGVTVEPRPTGLLLHQRQYTLDILERAGMTGCKPCPTPVDTQG 753

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           KLS     LVA+ T YR+LAGALQYL FTRPDI Y VQ
Sbjct: 754 KLSEAEGSLVADPTAYRNLAGALQYLTFTRPDITYAVQ 791



 Score = 50.4 bits (119), Expect(3) = 1e-70
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 622  ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
            + RV HVPT SQ+ADIFTKGLP+S + +F TSL+I
Sbjct: 950  DVRVLHVPTTSQFADIFTKGLPSSTFAEFRTSLNI 984


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score =  186 bits (472), Expect(3) = 7e-70
 Identities = 85/121 (70%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +3

Query: 264  PID-MTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANG 440
            P+D +TAYSDADW GC DS + TSGYCV+L DNL+SWSSKRQ TVS SSA+A+YR VA+ 
Sbjct: 1314 PVDSLTAYSDADWAGCPDSHRSTSGYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRAVAHA 1373

Query: 441  VAESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVAL 620
            +AE  WLRQLL EL   +T+AT+VYCDNVSAVYM++NP+ H+RTKH+EID+HFVR+KVAL
Sbjct: 1374 IAECCWLRQLLSELHISLTSATVVYCDNVSAVYMAANPVHHRRTKHIEIDIHFVREKVAL 1433

Query: 621  G 623
            G
Sbjct: 1434 G 1434



 Score = 82.8 bits (203), Expect(3) = 7e-70
 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
 Frame = +1

Query: 4    IHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTASK 156
            +HSEF+M+DL  +H+FLG      S         Y  ++L+ AGM+ C  +ATPVD  SK
Sbjct: 1180 LHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDLLKRAGMSECHSTATPVDARSK 1239

Query: 157  LSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
            LS      V++ T YRSL GALQYL  TRP++ Y VQ
Sbjct: 1240 LSATDGAPVSDPTEYRSLVGALQYLTLTRPELAYAVQ 1276



 Score = 43.9 bits (102), Expect(3) = 7e-70
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +1

Query: 622  ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI*APPVQTEG 753
            + RV H+P+  Q+ADI TKGLP  L+ +F +SL +   P  T G
Sbjct: 1435 QVRVLHLPSSHQFADIMTKGLPVQLFTEFRSSLCVRDNPASTAG 1478


>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
            gi|255676152|dbj|BAH93014.1| Os05g0235100, partial [Oryza
            sativa Japonica Group]
          Length = 841

 Score =  186 bits (472), Expect(3) = 7e-70
 Identities = 85/121 (70%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +3

Query: 264  PID-MTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANG 440
            P+D +TAYSDADW GC DS + TSGYCV+L DNL+SWSSKRQ TVS SSA+A+YR VA+ 
Sbjct: 675  PVDSLTAYSDADWAGCPDSHRSTSGYCVFLGDNLVSWSSKRQTTVSRSSAEAEYRAVAHA 734

Query: 441  VAESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVAL 620
            +AE  WLRQLL EL   +T+AT+VYCDNVSAVYM++NP+ H+RTKH+EID+HFVR+KVAL
Sbjct: 735  IAECCWLRQLLSELHISLTSATVVYCDNVSAVYMAANPVHHRRTKHIEIDIHFVREKVAL 794

Query: 621  G 623
            G
Sbjct: 795  G 795



 Score = 82.8 bits (203), Expect(3) = 7e-70
 Identities = 45/97 (46%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
 Frame = +1

Query: 4   IHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTASK 156
           +HSEF+M+DL  +H+FLG      S         Y  ++L+ AGM+ C  +ATPVD  SK
Sbjct: 541 LHSEFAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDLLKRAGMSECHSTATPVDARSK 600

Query: 157 LSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           LS      V++ T YRSL GALQYL  TRP++ Y VQ
Sbjct: 601 LSATDGAPVSDPTEYRSLVGALQYLTLTRPELAYAVQ 637



 Score = 43.9 bits (102), Expect(3) = 7e-70
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +1

Query: 622 ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI*APPVQTEG 753
           + RV H+P+  Q+ADI TKGLP  L+ +F +SL +   P  T G
Sbjct: 796 QVRVLHLPSSHQFADIMTKGLPVQLFTEFRSSLCVRDNPASTAG 839


>ref|XP_002444548.1| hypothetical protein SORBIDRAFT_07g023610 [Sorghum bicolor]
           gi|241940898|gb|EES14043.1| hypothetical protein
           SORBIDRAFT_07g023610 [Sorghum bicolor]
          Length = 791

 Score =  178 bits (451), Expect(3) = 1e-69
 Identities = 81/118 (68%), Positives = 99/118 (83%)
 Frame = +3

Query: 270 DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
           ++  Y+DADW GC D+R+ TSGY V+L  NL+SWSSKRQ  VS SSA+A+YR VANGVAE
Sbjct: 636 ELVVYTDADWAGCPDTRRSTSGYAVFLGGNLVSWSSKRQPVVSRSSAEAEYRAVANGVAE 695

Query: 450 SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
           + WLRQLL EL  P+  +++VYCDNVSAVY+S+NP+QHQRTKHVEIDLHFVRD VA+G
Sbjct: 696 AAWLRQLLAELHRPLARSSLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVRDHVAIG 753



 Score = 85.1 bits (209), Expect(3) = 1e-69
 Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 11/99 (11%)
 Frame = +1

Query: 4   IHSEFSMSDLSPIHYFLGGGRE---------HISYASEILE*AGMTNCKPSATPVDTASK 156
           +  EF+M DL  +H+FLG   E            +  +ILE AGMT+CK  +TPVDT  K
Sbjct: 497 LQKEFAMKDLGVLHHFLGVTVEPRPSGLFLHQRQFTCDILERAGMTDCKSCSTPVDTQGK 556

Query: 157 LSHNTIPLVA--NLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           LS    P++   + T YRSLAGALQYL FTRPDI Y VQ
Sbjct: 557 LSEAEGPMLGPEDSTAYRSLAGALQYLTFTRPDITYAVQ 595



 Score = 48.5 bits (114), Expect(3) = 1e-69
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = +1

Query: 622 ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
           + RV HVPT SQ+ADIFTKGLP+S + +F +SL++
Sbjct: 754 DIRVLHVPTTSQFADIFTKGLPSSTFAEFRSSLNV 788


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  189 bits (479), Expect(2) = 8e-68
 Identities = 97/164 (59%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
 Frame = +3

Query: 270  DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
            D+   SDADW GC D+RK TSGY V+L DNL+SWSSKRQNTVS SSA+A+YR VAN VAE
Sbjct: 1434 DLVVCSDADWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQNTVSRSSAEAEYRAVANAVAE 1493

Query: 450  SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG-M 626
            + WLRQLL EL +P + AT+VYCDNVSAVY+SSNP+QHQRTKHV+IDLHFVRDKVALG +
Sbjct: 1494 ASWLRQLLHELHSPPSKATLVYCDNVSAVYLSSNPVQHQRTKHVKIDLHFVRDKVALGAV 1553

Query: 627  QSFSCPNSKPICRYIHKRVAYKPLQEILNQSSHLSTSCSN*GGC 758
            +    P S        K +      E  +  +  S +    GGC
Sbjct: 1554 RVLHVPTSSQYADIFTKGLPSPVFVEFRSSLNVRSINVVTVGGC 1597



 Score = 95.9 bits (237), Expect(2) = 8e-68
 Identities = 55/98 (56%), Positives = 64/98 (65%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1    AIHSEFSMSDLSPIHYFLG--------GGREHI-SYASEILE*AGMTNCKPSATPVDTAS 153
            ++ SEFSM DL  +H+FLG        G   H   Y+ +ILE  GMT+CKP AT VDT +
Sbjct: 1296 SLQSEFSMKDLGALHHFLGVTVTRRDTGLLLHQRQYSLDILERPGMTDCKPCATLVDTCA 1355

Query: 154  KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
            KLS    P VA+ T YRSLAGALQYL FTRPDI Y VQ
Sbjct: 1356 KLSSTDAPPVADPTDYRSLAGALQYLTFTRPDISYAVQ 1393


>gb|ACF87376.2| unknown [Zea mays]
          Length = 526

 Score =  179 bits (453), Expect(3) = 8e-68
 Identities = 82/119 (68%), Positives = 101/119 (84%)
 Frame = +3

Query: 267 IDMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVA 446
           +D+ AYSDADW GC D+R+ TSGYCV+L  NL++WSSKRQ+TVS SSA+A+YRGVAN VA
Sbjct: 365 LDLLAYSDADWAGCPDTRRSTSGYCVFLGANLVAWSSKRQHTVSRSSAEAEYRGVANAVA 424

Query: 447 ESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
           E  WLRQLL EL  P   A +V+CDNVS +Y++SNP+QHQRTKHVEIDLHFVR++V+LG
Sbjct: 425 EICWLRQLLTELCHPPRRAAVVFCDNVSTMYLASNPVQHQRTKHVEIDLHFVRERVSLG 483



 Score = 82.0 bits (201), Expect(3) = 8e-68
 Identities = 49/95 (51%), Positives = 56/95 (58%), Gaps = 9/95 (9%)
 Frame = +1

Query: 10  SEFSMSDLSPIHYFLGGG---------REHISYASEILE*AGMTNCKPSATPVDTASKLS 162
           SEFSMSDL P+ +FLG                YA +IL  A MT+C P  TPVDT SK +
Sbjct: 231 SEFSMSDLGPLRHFLGIEVTPSDTGLVLSQKQYALDILARANMTHCNPCHTPVDTNSKPA 290

Query: 163 HNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
                L++  T YRSLAGALQYL  TRPDI Y VQ
Sbjct: 291 STDGCLLSQPTVYRSLAGALQYLTLTRPDISYAVQ 325



 Score = 45.1 bits (105), Expect(3) = 8e-68
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +1

Query: 622 ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
           E +V HVP+  Q+ADIFTKGL +SL+K+F ++L I
Sbjct: 484 EVKVIHVPSSLQFADIFTKGLSSSLFKEFRSNLQI 518


>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
            gi|241937618|gb|EES10763.1| hypothetical protein
            SORBIDRAFT_06g016046 [Sorghum bicolor]
          Length = 856

 Score =  180 bits (457), Expect(3) = 2e-67
 Identities = 84/120 (70%), Positives = 102/120 (85%)
 Frame = +3

Query: 264  PIDMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGV 443
            P  +  Y+DADW GC D+R+ TSGY V+L  +L+SWSSKRQ TVS SSA+A+YR VANGV
Sbjct: 705  PTQLVVYTDADWAGCPDTRRSTSGYAVFLGGSLVSWSSKRQPTVSRSSAEAEYRAVANGV 764

Query: 444  AESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
            AE  WL+QLL+EL  P+ +A+IVYCDNVSAVY+SSNPIQHQRTKHVEIDLHFVR++VA+G
Sbjct: 765  AEVSWLQQLLQELHHPLQSASIVYCDNVSAVYLSSNPIQHQRTKHVEIDLHFVRERVAIG 824



 Score = 93.6 bits (231), Expect(3) = 2e-67
 Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTAS 153
           A+  EF+M DL P+H+FLG   +            Y  +IL   GM++CKP  TPVDT +
Sbjct: 569 ALKKEFAMKDLGPLHHFLGVAVQRHKDQLTLSQRQYTLDILARHGMSDCKPCTTPVDTCA 628

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           K+S +  P VA+ T YRSLAGALQYL FTRPDI Y VQ
Sbjct: 629 KVSADAGPAVADPTAYRSLAGALQYLTFTRPDIAYAVQ 666



 Score = 30.4 bits (67), Expect(3) = 2e-67
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +1

Query: 628 RVFHVPTQSQYADIFTK 678
           RV HVPT SQ+AD+F K
Sbjct: 827 RVLHVPTTSQFADVFPK 843


>ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [Sorghum bicolor]
           gi|241935390|gb|EES08535.1| hypothetical protein
           SORBIDRAFT_05g018930 [Sorghum bicolor]
          Length = 619

 Score =  175 bits (444), Expect(3) = 8e-67
 Identities = 81/121 (66%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
 Frame = +3

Query: 264 PID-MTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANG 440
           P+D + AYSDADW  C DSR+ TSG+CV+L D+L+SWSSKRQ TVS SSA+A+YR VA+ 
Sbjct: 454 PVDKLIAYSDADWARCPDSRRSTSGFCVFLGDSLVSWSSKRQTTVSRSSAEAEYRAVAHV 513

Query: 441 VAESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVAL 620
           VAE  WL QLL+EL  P+  AT+VYCDN+SAVYM +NP+ H+RTKH+EID+HFVR+KVAL
Sbjct: 514 VAECCWLLQLLQELHVPLKVATVVYCDNISAVYMIANPVHHRRTKHIEIDIHFVREKVAL 573

Query: 621 G 623
           G
Sbjct: 574 G 574



 Score = 82.0 bits (201), Expect(3) = 8e-67
 Identities = 45/97 (46%), Positives = 61/97 (62%), Gaps = 9/97 (9%)
 Frame = +1

Query: 4   IHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTASK 156
           +HSEF+M+DL  +H+FLG      S         YA ++L+ AGM  C  ++TPVD+ +K
Sbjct: 320 LHSEFAMTDLGELHHFLGISVTRSSDGLFLSQRQYAVDLLQKAGMAECHLTSTPVDSRAK 379

Query: 157 LSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           LS      VA+ + YRSLAG+LQYL  TRPD+ Y VQ
Sbjct: 380 LSATEGTPVADPSAYRSLAGSLQYLTLTRPDLAYAVQ 416



 Score = 45.1 bits (105), Expect(3) = 8e-67
 Identities = 23/44 (52%), Positives = 29/44 (65%)
 Frame = +1

Query: 622 ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI*APPVQTEG 753
           E  V HVP++ Q+ADI TKGLP  L++ F +SL I  P   TEG
Sbjct: 575 EVCVLHVPSKYQFADIMTKGLPIQLFEDFRSSLCIRHPDALTEG 618


>ref|XP_004986749.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Setaria italica]
          Length = 253

 Score =  172 bits (435), Expect(3) = 2e-65
 Identities = 77/118 (65%), Positives = 97/118 (82%)
 Frame = +3

Query: 270 DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
           D+ AYSDA+W GC D+RK TSG  V+L DNL+SWSSKRQN VS SSA+A+YR +AN VAE
Sbjct: 96  DLIAYSDANWAGCPDTRKSTSGNAVFLGDNLVSWSSKRQNAVSRSSAEAEYRAIANTVAE 155

Query: 450 SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
            +WLRQL+ +LR P+    +VYCDNVS +YMSSNP+QHQ TKH++IDLHFVR+++A G
Sbjct: 156 IVWLRQLVLKLRAPLRHTALVYCDNVSTIYMSSNPVQHQCTKHIDIDLHFVRERIATG 213



 Score = 78.2 bits (191), Expect(3) = 2e-65
 Identities = 47/93 (50%), Positives = 56/93 (60%), Gaps = 11/93 (11%)
 Frame = +1

Query: 22  MSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTASKLSHNT- 171
           M DL  +H+FLG   +            +  EIL+ AGMT+C P ATP+DT  KLS    
Sbjct: 1   MKDLGTLHHFLGMHVQQSGDGLLLSQRQFMLEILDHAGMTDCTPCATPIDTNPKLSAAVG 60

Query: 172 IPLVANL-THYRSLAGALQYLAFTRPDIQYVVQ 267
           +PL A   + YRSLAGALQYL FTRPDI Y VQ
Sbjct: 61  VPLTATAASDYRSLAGALQYLTFTRPDIAYAVQ 93



 Score = 48.1 bits (113), Expect(3) = 2e-65
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = +1

Query: 622 ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI 726
           + RV HVPT S+YA IFTKGLP+S++ KF +SL++
Sbjct: 214 DVRVLHVPTTSRYAGIFTKGLPSSVFTKFRSSLNV 248


>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
            [Oryza sativa Japonica Group]
          Length = 976

 Score =  181 bits (458), Expect(2) = 5e-65
 Identities = 91/164 (55%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
 Frame = +3

Query: 270  DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
            D+ AYSDA+W GC D+RK T GY V+L DNLISWSSKRQNTVS SSA+A+YR VAN VAE
Sbjct: 813  DLMAYSDANWAGCPDTRKSTFGYAVFLGDNLISWSSKRQNTVSRSSAEAEYRAVANAVAE 872

Query: 450  SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG-M 626
            + WLRQLL EL  P + AT+VYCDNVSAVY+S+NP+QHQRTKHVEIDLHFV ++V +G +
Sbjct: 873  TSWLRQLLHELYAPPSKATLVYCDNVSAVYLSTNPVQHQRTKHVEIDLHFVHERVDVGAV 932

Query: 627  QSFSCPNSKPICRYIHKRVAYKPLQEILNQSSHLSTSCSN*GGC 758
            +    P +        K +      E  +  +   +  +  GGC
Sbjct: 933  RVLHVPTTSQYANVFTKGLPSPVFNEFRSSLNVRCSDVATAGGC 976



 Score = 94.7 bits (234), Expect(2) = 5e-65
 Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLG-------GGR--EHISYASEILE*AGMTNCKPSATPVDTAS 153
           ++  EFSM DL P+++FLG       GG       Y  EILE AGM++CKP  TPVDT++
Sbjct: 675 SLQKEFSMKDLGPLNHFLGINVTPHSGGLLLTQRQYCLEILERAGMSDCKPCLTPVDTSA 734

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           K S    P V++ T +RSLAGALQYL FTRPDI Y VQ
Sbjct: 735 KFSTEGSPSVSDPTDFRSLAGALQYLTFTRPDISYAVQ 772


>ref|XP_002444394.1| hypothetical protein SORBIDRAFT_07g021220 [Sorghum bicolor]
           gi|241940744|gb|EES13889.1| hypothetical protein
           SORBIDRAFT_07g021220 [Sorghum bicolor]
          Length = 623

 Score =  182 bits (461), Expect(3) = 1e-64
 Identities = 83/118 (70%), Positives = 101/118 (85%)
 Frame = +3

Query: 270 DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
           D+  Y+DADW GC D+RK TSGY V+L +NL+SWSSKRQNTVS S+A+A+Y  VANGVAE
Sbjct: 478 DLVVYTDADWAGCPDTRKSTSGYVVFLGNNLVSWSSKRQNTVSRSNAEAEYHAVANGVAE 537

Query: 450 SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
           + WLRQLL EL  P+  AT+VYCDN+SAVYM+SN IQHQRTKH+EIDLHFVR++VA+G
Sbjct: 538 ATWLRQLLLELHAPLRRATLVYCDNISAVYMTSNLIQHQRTKHIEIDLHFVRERVAIG 595



 Score = 67.8 bits (164), Expect(3) = 1e-64
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = +1

Query: 103 AGMTNCKPSATPVDTASKLSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
           AGM  CKP +TPVDT  K++      V++ T +RSLAGALQYL FTRPDI YVVQ
Sbjct: 383 AGMAECKPCSTPVDTNPKVAAAEGGPVSDATDFRSLAGALQYLTFTRPDIAYVVQ 437



 Score = 45.4 bits (106), Expect(3) = 1e-64
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +1

Query: 622 ECRVFHVPTQSQYADIFTKGLPTSLY 699
           + RV HVPT SQYADIFTKGLP+S++
Sbjct: 596 DLRVLHVPTSSQYADIFTKGLPSSVF 621


>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  164 bits (414), Expect(3) = 2e-63
 Identities = 75/107 (70%), Positives = 92/107 (85%)
 Frame = +3

Query: 303  GCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAESIWLRQLLKEL 482
            GC DSR+ TSGYCV+L +NL+SWSSKRQ TVS SSA+A+YR VA+ VAE  WLRQLL EL
Sbjct: 911  GCPDSRRSTSGYCVFLGENLVSWSSKRQTTVSRSSAEAEYRAVAHAVAECCWLRQLLLEL 970

Query: 483  RTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG 623
              P+ +AT VYCDNVSAVYM++NP+ H++TKH+EID+HFVR+KVALG
Sbjct: 971  HIPLASATTVYCDNVSAVYMTANPVHHRQTKHIEIDIHFVREKVALG 1017



 Score = 85.1 bits (209), Expect(3) = 2e-63
 Identities = 47/97 (48%), Positives = 60/97 (61%), Gaps = 9/97 (9%)
 Frame = +1

Query: 4    IHSEFSMSDLSPIHYFLGGGREHIS---------YASEILE*AGMTNCKPSATPVDTASK 156
            +HSEF+M+DL  +H+FLG      +         YA ++L  AGM+ C P+ATPVD   K
Sbjct: 812  LHSEFAMTDLGDLHFFLGISVTRSADGLFLSQRQYAVDLLRRAGMSECHPTATPVDARCK 871

Query: 157  LSHNTIPLVANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
            LS      V++ T YRSLAGALQYL  TRP+I Y VQ
Sbjct: 872  LSAIDGAPVSDPTEYRSLAGALQYLTLTRPEIAYAVQ 908



 Score = 42.0 bits (97), Expect(3) = 2e-63
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +1

Query: 622  ECRVFHVPTQSQYADIFTKGLPTSLYKKF*TSLHI-*APPVQTEG 753
            +  V HVP+  Q+ADI TKGLP  L+ +F +SL +   PP  T G
Sbjct: 1018 QVHVLHVPSSHQFADIMTKGLPVQLFTEFRSSLCVRDVPPTLTAG 1062


>ref|XP_004963727.1| PREDICTED: uncharacterized protein LOC101777694 [Setaria italica]
          Length = 1416

 Score =  183 bits (465), Expect(2) = 3e-62
 Identities = 91/164 (55%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
 Frame = +3

Query: 270  DMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVAE 449
            +   YSDADW GC D+RK TSGY V+L DNL+SWSSKRQN VS SSA+A+YR VAN VAE
Sbjct: 1253 EFVVYSDADWAGCPDTRKSTSGYAVFLGDNLVSWSSKRQNAVSRSSAEAEYRAVANAVAE 1312

Query: 450  SIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALG-M 626
              WLRQLL ELR P+    +VYCDN+S +YMSSNPIQHQRTKHVEIDLHFVR++VA G +
Sbjct: 1313 VTWLRQLLHELRVPLRRTALVYCDNISTMYMSSNPIQHQRTKHVEIDLHFVRERVATGEV 1372

Query: 627  QSFSCPNSKPICRYIHKRVAYKPLQEILNQSSHLSTSCSN*GGC 758
            +    P +        K +      E  +  +  +T     GGC
Sbjct: 1373 RVLHVPTTSQYADIFTKGLPSSVFTEFRSSLNVQATDAQTAGGC 1416



 Score = 82.4 bits (202), Expect(2) = 3e-62
 Identities = 50/99 (50%), Positives = 61/99 (61%), Gaps = 11/99 (11%)
 Frame = +1

Query: 4    IHSEFSMSDLSPIHYFLG-----GGREHI----SYASEILE*AGMTNCKPSATPVDTASK 156
            +  EFSM DL  +H+FLG      G+  +     +  EIL+ AGMT+CK   TPVDT  K
Sbjct: 1114 LRQEFSMKDLGQLHHFLGMHVQRSGKGLLLSQRQFMVEILDRAGMTDCKSCQTPVDTNPK 1173

Query: 157  LSHNTIPLV--ANLTHYRSLAGALQYLAFTRPDIQYVVQ 267
            LS +   L+  A  + YRSLAGALQYL FTRPDI Y VQ
Sbjct: 1174 LSDSDGNLLSAAAASDYRSLAGALQYLTFTRPDISYAVQ 1212


>gb|AAX92854.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77549812|gb|ABA92609.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 336

 Score =  169 bits (429), Expect(3) = 4e-62
 Identities = 81/120 (67%), Positives = 97/120 (80%)
 Frame = +3

Query: 267 IDMTAYSDADWVGCLDSRKLTSGYCVYLDDNLISWSSKRQNTVSMSSAKAKYRGVANGVA 446
           +D+ AYSDADW GC + R+ TSGY V+L DNL+SWSSK QNT+S SSAKAKYR VA    
Sbjct: 195 VDLVAYSDADWAGCPNMRRSTSGYVVFLGDNLVSWSSKHQNTLSRSSAKAKYRAVA---- 250

Query: 447 ESIWLRQLLKELRTPITTATIVYCDNVSAVYMSSNPIQHQRTKHVEIDLHFVRDKVALGM 626
           E+ WLRQLL EL +P + AT+VYCDNV+AVY+ +NP QHQRTKHVEIDLHFVRD+V  G+
Sbjct: 251 ETCWLRQLLNELHSPPSKATVVYCDNVNAVYLFTNPEQHQRTKHVEIDLHFVRDRVDAGV 310



 Score = 72.4 bits (176), Expect(3) = 4e-62
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 9/89 (10%)
 Frame = +1

Query: 1   AIHSEFSMSDLSPIHYFLG------GGREHIS---YASEILE*AGMTNCKPSATPVDTAS 153
           A+ +EFSM DL  + +FLG          ++S   Y  +IL+ AGM++CKP +TPVDT +
Sbjct: 76  ALQAEFSMKDLGTLDHFLGISVCRTSASMYLSQRQYILDILDRAGMSDCKPCSTPVDTNA 135

Query: 154 KLSHNTIPLVANLTHYRSLAGALQYLAFT 240
           KLS      VA+ T +RSLAGALQYL FT
Sbjct: 136 KLSAVDGDSVADPTDFRSLAGALQYLTFT 164



 Score = 44.7 bits (104), Expect(3) = 4e-62
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 628 RVFHVPTQSQYADIFTKGLPTSLY 699
           RV HVPT SQYADIFTKGLP+S++
Sbjct: 312 RVLHVPTTSQYADIFTKGLPSSVF 335